VIRsiRNAdb

Predicted off-targets seeds for siRNA "gggcaacucugcagcggaa" Using siRNA Seed Locator Algorithm

siRNA Seed Locator
Total Genes with at least one seed match :1269.
Total Genes with multiple seed matches: 90.
Genes with at least one seed match: NM_000037 NM_000051 NM_000076 NM_000091 NM_000094 NM_000112 NM_000113 NM_000118 NM_000163 NM_000246 NM_000250 NM_000268 NM_000335 NM_000389 NM_000397 NM_000444 NM_000476 NM_000527 NM_000599 NM_000611 NM_000664 NM_000734 NM_000782 NM_000809 NM_000834 NM_000838 NM_000842 NM_000907 NM_000933 NM_000942 NM_000953 NM_000961 NM_000991 NM_001001188 NM_001001394 NM_001001433 NM_001001434 NM_001001484 NM_001001522 NM_001001549 NM_001001550 NM_001001555 NM_001001677 NM_001001685 NM_001001709 NM_001001711 NM_001001791 NM_001001795 NM_001002836 NM_001002880 NM_001003406 NM_001003725 NM_001003940 NM_001003942 NM_001003943 NM_001004285 NM_001004286 NM_001004299 NM_001004302 NM_001004321 NM_001004334 NM_001004335 NM_001004439 NM_001005303 NM_001005387 NM_001005407 NM_001005412 NM_001005414 NM_001006113 NM_001006617 NM_001006619 NM_001006620 NM_001006621 NM_001006623 NM_001006658 NM_001006932 NM_001006946 NM_001007071 NM_001007237 NM_001007535 NM_001008224 NM_001008234 NM_001008389 NM_001008395 NM_001008408 NM_001008695 NM_001008696 NM_001008707 NM_001009566 NM_001009820 NM_001009880 NM_001009883 NM_001010867 NM_001010871 NM_001010883 NM_001010897 NM_001010903 NM_001010938 NM_001011880 NM_001012420 NM_001012423 NM_001012424 NM_001012716 NM_001013617 NM_001013635 NM_001013637 NM_001013652 NM_001013656 NM_001013669 NM_001013685 NM_001013693 NM_001013696 NM_001013701 NM_001013708 NM_001013712 NM_001013723 NM_001013726 NM_001013738 NM_001013839 NM_001014797 NM_001014985 NM_001017916 NM_001017917 NM_001017918 NM_001018003 NM_001018051 NM_001018065 NM_001018066 NM_001018095 NM_001018096 NM_001018097 NM_001018099 NM_001018103 NM_001018109 NM_001024598 NM_001024668 NM_001024669 NM_001024670 NM_001024671 NM_001024677 NM_001024732 NM_001024844 NM_001066 NM_001082 NM_001103 NM_001116 NM_001130 NM_001174 NM_001235 NM_001238 NM_001257 NM_001277 NM_001282 NM_001299 NM_001346 NM_001397 NM_001417 NM_001495 NM_001520 NM_001542 NM_001567 NM_001716 NM_001782 NM_001838 NM_001877 NM_001902 NM_001905 NM_001908 NM_001913 NM_001915 NM_001936 NM_001975 NM_001980 NM_001995 NM_002017 NM_002030 NM_002034 NM_002037 NM_002052 NM_002086 NM_002088 NM_002109 NM_002148 NM_002150 NM_002180 NM_002193 NM_002204 NM_002231 NM_002232 NM_002319 NM_002360 NM_002460 NM_002461 NM_002501 NM_002566 NM_002588 NM_002613 NM_002629 NM_002634 NM_002735 NM_002739 NM_002740 NM_002840 NM_002847 NM_002895 NM_002911 NM_002918 NM_002993 NM_002997 NM_003006 NM_003014 NM_003017 NM_003023 NM_003044 NM_003061 NM_003084 NM_003108 NM_003186 NM_003200 NM_003236 NM_003246 NM_003288 NM_003313 NM_003320 NM_003361 NM_003374 NM_003382 NM_003439 NM_003605 NM_003617 NM_003622 NM_003655 NM_003662 NM_003681 NM_003686 NM_003735 NM_003736 NM_003745 NM_003763 NM_003824 NM_003897 NM_003938 NM_003950 NM_003958 NM_003966 NM_003998 NM_004050 NM_004054 NM_004098 NM_004167 NM_004171 NM_004200 NM_004202 NM_004207 NM_004223 NM_004227 NM_004256 NM_004269 NM_004309 NM_004360 NM_004367 NM_004370 NM_004423 NM_004434 NM_004455 NM_004474 NM_004498 NM_004505 NM_004514 NM_004529 NM_004566 NM_004571 NM_004583 NM_004592 NM_004621 NM_004637 NM_004687 NM_004689 NM_004710 NM_004745 NM_004758 NM_004778 NM_004781 NM_004805 NM_004807 NM_004834 NM_004845 NM_004926 NM_004936 NM_004992 NM_005011 NM_005077 NM_005093 NM_005098 NM_005112 NM_005169 NM_005184 NM_005188 NM_005195 NM_005202 NM_005219 NM_005271 NM_005276 NM_005291 NM_005311 NM_005326 NM_005380 NM_005428 NM_005475 NM_005537 NM_005584 NM_005595 NM_005597 NM_005627 NM_005641 NM_005642 NM_005658 NM_005668 NM_005669 NM_005730 NM_005748 NM_005766 NM_005775 NM_005781 NM_005828 NM_005883 NM_005894 NM_005969 NM_005986 NM_006016 NM_006024 NM_006034 NM_006045 NM_006096 NM_006237 NM_006242 NM_006253 NM_006257 NM_006306 NM_006315 NM_006322 NM_006325 NM_006383 NM_006481 NM_006520 NM_006557 NM_006577 NM_006625 NM_006673 NM_006697 NM_006767 NM_006771 NM_006795 NM_006819 NM_006848 NM_006861 NM_006931 NM_006943 NM_006965 NM_007014 NM_007030 NM_007100 NM_007129 NM_007144 NM_007202 NM_007261 NM_007306 NM_007335 NM_007336 NM_007338 NM_007345 NM_012098 NM_012102 NM_012121 NM_012135 NM_012211 NM_012225 NM_012226 NM_012231 NM_012279 NM_012288 NM_012289 NM_012308 NM_012316 NM_012347 NM_012393 NM_012398 NM_012409 NM_012431 NM_012448 NM_012476 NM_013260 NM_013261 NM_013262 NM_013382 NM_013438 NM_014011 NM_014035 NM_014212 NM_014213 NM_014214 NM_014228 NM_014231 NM_014268 NM_014351 NM_014352 NM_014405 NM_014431 NM_014447 NM_014518 NM_014555 NM_014562 NM_014569 NM_014570 NM_014571 NM_014577 NM_014580 NM_014603 NM_014631 NM_014634 NM_014690 NM_014734 NM_014759 NM_014760 NM_014798 NM_014807 NM_014824 NM_014844 NM_014849 NM_014851 NM_014899 NM_014910 NM_014919 NM_014944 NM_014945 NM_014967 NM_015011 NM_015023 NM_015039 NM_015094 NM_015124 NM_015136 NM_015144 NM_015194 NM_015219 NM_015226 NM_015247 NM_015264 NM_015267 NM_015289 NM_015314 NM_015316 NM_015320 NM_015361 NM_015369 NM_015373 NM_015381 NM_015416 NM_015447 NM_015481 NM_015518 NM_015554 NM_015559 NM_015565 NM_015604 NM_015686 NM_015714 NM_015859 NM_015871 NM_015891 NM_015898 NM_015913 NM_015939 NM_015980 NM_016011 NM_016034 NM_016060 NM_016151 NM_016215 NM_016263 NM_016318 NM_016351 NM_016373 NM_016418 NM_016467 NM_016510 NM_016534 NM_016561 NM_016617 NM_016735 NM_016931 NM_016936 NM_017424 NM_017436 NM_017451 NM_017491 NM_017495 NM_017588 NM_017592 NM_017693 NM_017709 NM_017721 NM_017723 NM_017729 NM_017731 NM_017765 NM_017787 NM_017799 NM_017805 NM_017849 NM_017863 NM_017873 NM_017896 NM_017921 NM_017946 NM_017968 NM_017979 NM_018003 NM_018022 NM_018058 NM_018066 NM_018089 NM_018172 NM_018184 NM_018198 NM_018209 NM_018223 NM_018244 NM_018246 NM_018264 NM_018279 NM_018287 NM_018292 NM_018340 NM_018342 NM_018364 NM_018439 NM_018590 NM_018656 NM_018683 NM_018898 NM_018899 NM_018900 NM_018901 NM_018902 NM_018903 NM_018904 NM_018905 NM_018906 NM_018907 NM_018908 NM_018909 NM_018910 NM_018911 NM_018912 NM_018913 NM_018914 NM_018915 NM_018916 NM_018917 NM_018918 NM_018919 NM_018920 NM_018921 NM_018922 NM_018923 NM_018924 NM_018925 NM_018926 NM_018927 NM_018928 NM_018929 NM_018940 NM_018943 NM_018951 NM_018952 NM_019059 NM_019064 NM_019094 NM_019102 NM_019604 NM_019857 NM_020142 NM_020227 NM_020247 NM_020312 NM_020382 NM_020384 NM_020397 NM_020416 NM_020424 NM_020437 NM_020462 NM_020475 NM_020476 NM_020477 NM_020655 NM_020673 NM_020708 NM_020710 NM_020754 NM_020773 NM_020786 NM_020795 NM_020807 NM_020808 NM_020845 NM_020850 NM_020853 NM_020899 NM_020972 NM_021049 NM_021093 NM_021096 NM_021098 NM_021132 NM_021135 NM_021164 NM_021192 NM_021201 NM_021248 NM_021619 NM_021638 NM_021643 NM_021722 NM_021723 NM_021729 NM_021818 NM_021945 NM_021958 NM_021961 NM_022049 NM_022063 NM_022078 NM_022083 NM_022114 NM_022132 NM_022143 NM_022151 NM_022170 NM_022356 NM_022436 NM_022463 NM_022549 NM_022766 NM_022768 NM_022834 NM_022898 NM_023004 NM_023007 NM_023032 NM_023074 NM_024019 NM_024026 NM_024035 NM_024085 NM_024086 NM_024117 NM_024299 NM_024329 NM_024527 NM_024558 NM_024563 NM_024580 NM_024588 NM_024630 NM_024633 NM_024652 NM_024653 NM_024671 NM_024735 NM_024738 NM_024780 NM_024816 NM_024834 NM_024847 NM_024894 NM_025072 NM_025078 NM_025197 NM_025224 NM_030573 NM_030636 NM_030661 NM_030664 NM_030783 NM_030821 NM_030895 NM_030914 NM_030929 NM_031265 NM_031268 NM_031281 NM_031362 NM_031363 NM_031364 NM_031365 NM_031366 NM_031409 NM_031411 NM_031431 NM_031432 NM_031445 NM_031448 NM_031456 NM_031459 NM_031462 NM_031849 NM_031857 NM_031860 NM_031909 NM_031913 NM_031966 NM_031992 NM_032017 NM_032042 NM_032045 NM_032088 NM_032092 NM_032134 NM_032179 NM_032226 NM_032251 NM_032256 NM_032262 NM_032268 NM_032294 NM_032318 NM_032329 NM_032389 NM_032403 NM_032420 NM_032444 NM_032529 NM_032578 NM_032594 NM_032656 NM_032732 NM_032740 NM_032753 NM_032770 NM_032772 NM_032805 NM_032837 NM_032854 NM_032869 NM_032932 NM_032933 NM_032957 NM_032964 NM_032966 NM_032974 NM_032988 NM_032995 NM_033083 NM_033141 NM_033161 NM_033220 NM_033224 NM_033229 NM_033252 NM_033282 NM_033315 NM_033332 NM_033402 NM_033428 NM_033449 NM_033480 NM_033481 NM_033503 NM_033513 NM_052815 NM_052821 NM_052855 NM_052859 NM_052896 NM_052925 NM_052937 NM_052952 NM_052966 NM_052978 NM_052988 NM_053005 NM_053044 NM_053056 NM_053279 NM_054023 NM_054111 NM_057182 NM_058183 NM_078467 NM_078487 NM_079834 NM_080473 NM_080551 NM_080626 NM_080627 NM_080645 NM_080657 NM_080665 NM_080738 NM_080836 NM_080871 NM_080928 NM_130440 NM_130446 NM_130788 NM_130792 NM_130797 NM_130807 NM_130809 NM_130842 NM_130843 NM_133175 NM_133176 NM_133180 NM_133332 NM_133333 NM_133334 NM_133367 NM_133370 NM_133433 NM_133445 NM_133452 NM_133456 NM_133463 NM_133468 NM_134324 NM_134422 NM_134423 NM_134424 NM_138276 NM_138277 NM_138280 NM_138292 NM_138348 NM_138350 NM_138393 NM_138413 NM_138479 NM_138576 NM_138614 NM_138699 NM_138983 NM_139016 NM_139122 NM_139123 NM_139204 NM_139315 NM_144494 NM_144601 NM_144621 NM_144652 NM_144669 NM_144682 NM_144683 NM_144692 NM_144949 NM_145039 NM_145068 NM_145102 NM_145187 NM_145188 NM_145189 NM_145190 NM_145245 NM_145328 NM_145654 NM_145686 NM_145687 NM_145798 NM_145809 NM_145861 NM_147189 NM_147780 NM_147781 NM_147782 NM_147783 NM_148675 NM_152235 NM_152253 NM_152266 NM_152344 NM_152367 NM_152372 NM_152382 NM_152392 NM_152395 NM_152416 NM_152451 NM_152456 NM_152458 NM_152470 NM_152495 NM_152534 NM_152563 NM_152678 NM_152682 NM_152695 NM_152715 NM_152783 NM_152913 NM_152995 NM_153008 NM_153023 NM_153029 NM_153047 NM_153048 NM_153239 NM_153240 NM_153284 NM_153334 NM_153340 NM_153442 NM_153462 NM_153463 NM_153487 NM_153631 NM_153632 NM_153715 NM_153742 NM_153746 NM_153836 NM_156036 NM_156037 NM_170607 NM_170682 NM_170683 NM_170706 NM_172206 NM_172234 NM_172239 NM_172346 NM_173352 NM_173463 NM_173466 NM_173484 NM_173502 NM_173536 NM_173619 NM_173680 NM_173683 NM_173805 NM_174872 NM_174873 NM_174940 NM_175607 NM_175609 NM_175612 NM_175709 NM_175736 NM_175859 NM_175864 NM_175871 NM_175875 NM_175895 NM_175913 NM_175922 NM_176095 NM_176096 NM_176782 NM_176799 NM_176871 NM_176874 NM_177405 NM_177963 NM_177972 NM_177978 NM_177979 NM_177999 NM_178012 NM_178145 NM_178338 NM_178342 NM_178448 NM_178494 NM_178831 NM_178842 NM_178864 NM_181340 NM_181341 NM_181358 NM_181430 NM_181431 NM_181500 NM_181504 NM_181523 NM_181524 NM_181553 NM_181554 NM_181555 NM_181704 NM_181710 NM_181783 NM_181784 NM_181826 NM_181827 NM_181828 NM_181829 NM_181830 NM_181832 NM_181833 NM_181834 NM_181835 NM_181876 NM_182481 NM_182482 NM_182484 NM_182528 NM_182533 NM_182610 NM_182612 NM_182619 NM_182691 NM_182692 NM_182744 NM_182797 NM_182812 NM_182895 NM_183059 NM_183078 NM_183414 NM_183425 NM_194071 NM_194295 NM_194299 NM_194314 NM_194352 NM_194356 NM_197954 NM_198053 NM_198056 NM_198075 NM_198138 NM_198183 NM_198204 NM_198205 NM_198217 NM_198218 NM_198219 NM_198256 NM_198257 NM_198258 NM_198268 NM_198269 NM_198284 NM_198325 NM_198402 NM_198445 NM_198488 NM_198499 NM_198508 NM_198557 NM_198560 NM_198595 NM_198834 NM_198835 NM_198836 NM_198837 NM_198838 NM_198839 NM_198900 NM_198938 NM_198939 NM_198940 NM_198943 NM_198969 NM_198970 NM_199003 NM_199040 NM_199121 NM_199163 NM_199245 NM_199337 NM_199359 NM_199360 NM_199361 NM_199362 NM_199363 NM_199424 NM_199454 NM_199487 NM_199513 NM_201400 NM_201434 NM_201446 NM_201556 NM_201557 NM_201595 NM_201598 NM_203329 NM_203330 NM_203331 NM_203411 NM_203422 NM_203425 NM_203500 NM_203506 NM_205843 NM_206938 NM_206939 NM_206940 NM_207043 NM_207044 NM_207047 NM_207315 NM_207320 NM_207362 NM_207366 NM_207367 NM_207373 NM_207390 NM_207400 NM_207419 NM_207423 NM_207432 NM_207440 NM_207458 NM_207462 NM_207463 NM_207475 NM_207480 NM_207504 NM_212469 NM_212481 NM_212555 NM_213600 NM_214677 NM_214678 NM_214679 XM_028217 XM_032901 XM_034872 XM_042698 XM_042978 XM_045421 XM_055866 XM_058628 XM_166227 XM_208058 XM_290546 XM_290670 XM_291001 XM_291170 XM_351854 XM_370603 XM_370837 XM_370843 XM_370878 XM_370909 XM_371181 XM_371230 XM_371354 XM_371423 XM_371476 XM_371664 XM_371801 XM_373030 XM_373474 XM_373531 XM_373547 XM_373562 XM_373606 XM_373748 XM_373786 XM_373788 XM_373883 XM_374190 XM_374414 XM_374498 XM_374880 XM_375090 XM_375152 XM_375292 XM_375373 XM_375606 XM_375821 XM_376522 XM_376586 XM_376587 XM_376784 XM_376869 XM_377028 XM_377041 XM_377073 XM_377259 XM_378178 XM_378272 XM_378379 XM_378394 XM_378625 XM_378730 XM_378746 XM_378798 XM_378823 XM_378828 XM_378883 XM_378949 XM_379029 XM_379118 XM_379135 XM_379136 XM_379145 XM_379171 XM_379254 XM_379273 XM_379391 XM_379535 XM_379594 XM_379628 XM_379648 XM_379668 XM_379798 XM_380160 XM_495807 XM_495909 XM_495918 XM_495939 XM_496134 XM_496223 XM_496360 XM_496449 XM_496547 XM_496689 XM_496877 XM_496981 XM_496982 XM_496983 XM_496984 XM_496985 XM_498469 XM_498474 XM_498491 XM_498494 XM_498497 XM_498553 XM_498557 XM_498649 XM_498687 XM_498697 XM_498739 XM_498814 XM_498825 XM_498835 XM_498910 XM_498912 XM_498914 XM_498915 XM_498938 XM_498945 XM_498954 XM_498956 XM_498992 XM_499008 XM_499022 XM_499048 XM_499068 XM_499093 XM_499103 XM_499139 XM_499146 XM_499155 XM_499519 XR_000184 XR_000261 XR_000268 XR_000272 XR_000292 XR_000294	Genes with multiple seed matches: NM_000611 NM_000664 NM_001001188 NM_001002836 NM_001006932 NM_001008408 NM_001009820 NM_001009880 NM_001009883 NM_001013726 NM_001013839 NM_001174 NM_001567 NM_002088 NM_002180 NM_002461 NM_002501 NM_004370 NM_004992 NM_005595 NM_005597 NM_006848 NM_006861 NM_007335 NM_007336 NM_007338 NM_012121 NM_015124 NM_015219 NM_015226 NM_015264 NM_016936 NM_017495 NM_020416 NM_021135 NM_021164 NM_021638 NM_022170 NM_022834 NM_024816 NM_031992 NM_032017 NM_032042 NM_032262 NM_032529 NM_032770 NM_033315 NM_033513 NM_052896 NM_080645 NM_134422 NM_134423 NM_134424 NM_138699 NM_138983 NM_145039 NM_152235 NM_153029 NM_172239 NM_173805 NM_176799 NM_178448 NM_181430 NM_181431 NM_181876 NM_182812 NM_183425 NM_198508 NM_198595 NM_198835 NM_199121 NM_203329 NM_203330 NM_203331 NM_205843 NM_207462 NM_207504 XM_290670 XM_374414 XM_376587 XM_376784 XM_378178 XM_379254 XM_496981 XM_496982 XM_496983 XM_496984 XM_496985 XM_498497 XM_498739

For Details about the algorithm please see
"3' UTR seed matches, but not overall identity, are associated with RNAi off-targets" ,Nature Methods - 3, 199 - 204 (2006)

VIRsiRNAdb

Database of Viral siRNA / shRNA