VIRsiRNAdb

Predicted off-targets seeds for siRNA "uaugaaguacgucgagugg" Using siRNA Seed Locator Algorithm

siRNA Seed Locator
Total Genes with at least one seed match :1406.
Total Genes with multiple seed matches: 132.
Genes with at least one seed match: NM_000023 NM_000070 NM_000094 NM_000132 NM_000161 NM_000188 NM_000210 NM_000214 NM_000230 NM_000264 NM_000296 NM_000326 NM_000332 NM_000389 NM_000451 NM_000498 NM_000511 NM_000516 NM_000545 NM_000611 NM_000628 NM_000632 NM_000641 NM_000647 NM_000664 NM_000702 NM_000709 NM_000719 NM_000723 NM_000724 NM_000726 NM_000744 NM_000748 NM_000761 NM_000780 NM_000787 NM_000838 NM_000841 NM_000843 NM_000876 NM_000885 NM_000890 NM_000902 NM_000916 NM_000926 NM_000962 NM_000991 NM_001001188 NM_001001437 NM_001001677 NM_001001723 NM_001001732 NM_001001894 NM_001001895 NM_001001928 NM_001001929 NM_001001930 NM_001002261 NM_001002262 NM_001002836 NM_001002920 NM_001003399 NM_001003407 NM_001003408 NM_001003665 NM_001003674 NM_001003675 NM_001003683 NM_001003789 NM_001003794 NM_001004125 NM_001004302 NM_001004322 NM_001004336 NM_001004343 NM_001004347 NM_001004355 NM_001004360 NM_001005365 NM_001005387 NM_001005404 NM_001005746 NM_001005747 NM_001006113 NM_001006634 NM_001006932 NM_001007024 NM_001007025 NM_001007097 NM_001007254 NM_001007269 NM_001007270 NM_001007279 NM_001007540 NM_001008234 NM_001008528 NM_001008568 NM_001008569 NM_001008570 NM_001008571 NM_001008701 NM_001008745 NM_001009185 NM_001009584 NM_001009880 NM_001009939 NM_001009944 NM_001010846 NM_001010854 NM_001010866 NM_001010891 NM_001011722 NM_001012711 NM_001012733 NM_001012734 NM_001012753 NM_001012982 NM_001013442 NM_001013635 NM_001013648 NM_001013673 NM_001013693 NM_001013719 NM_001013721 NM_001013723 NM_001013840 NM_001014283 NM_001014812 NM_001015048 NM_001015049 NM_001015051 NM_001015053 NM_001015886 NM_001017395 NM_001017972 NM_001018000 NM_001018058 NM_001018095 NM_001018099 NM_001020658 NM_001023565 NM_001024401 NM_001024592 NM_001024596 NM_001024630 NM_001024631 NM_001024666 NM_001024843 NM_001025076 NM_001025077 NM_001025242 NM_001025243 NM_001049 NM_001058 NM_001085 NM_001089 NM_001092 NM_001093 NM_001124 NM_001127 NM_001128 NM_001148 NM_001189 NM_001206 NM_001224 NM_001226 NM_001245 NM_001277 NM_001287 NM_001291 NM_001292 NM_001327 NM_001336 NM_001347 NM_001360 NM_001401 NM_001419 NM_001420 NM_001421 NM_001457 NM_001465 NM_001493 NM_001543 NM_001556 NM_001569 NM_001610 NM_001649 NM_001659 NM_001670 NM_001695 NM_001776 NM_001875 NM_001912 NM_001914 NM_001980 NM_001987 NM_001991 NM_002045 NM_002073 NM_002094 NM_002105 NM_002107 NM_002142 NM_002147 NM_002204 NM_002222 NM_002228 NM_002236 NM_002237 NM_002246 NM_002254 NM_002265 NM_002268 NM_002309 NM_002313 NM_002340 NM_002341 NM_002359 NM_002373 NM_002375 NM_002406 NM_002428 NM_002442 NM_002461 NM_002469 NM_002522 NM_002531 NM_002579 NM_002595 NM_002613 NM_002627 NM_002629 NM_002648 NM_002688 NM_002710 NM_002737 NM_002762 NM_002832 NM_002848 NM_002859 NM_002873 NM_002897 NM_002937 NM_002957 NM_002959 NM_002978 NM_002983 NM_003036 NM_003042 NM_003051 NM_003077 NM_003088 NM_003107 NM_003119 NM_003155 NM_003179 NM_003189 NM_003212 NM_003216 NM_003219 NM_003224 NM_003262 NM_003281 NM_003286 NM_003316 NM_003328 NM_003396 NM_003470 NM_003483 NM_003486 NM_003489 NM_003490 NM_003498 NM_003502 NM_003507 NM_003575 NM_003586 NM_003590 NM_003605 NM_003624 NM_003644 NM_003650 NM_003681 NM_003683 NM_003704 NM_003713 NM_003714 NM_003758 NM_003760 NM_003775 NM_003800 NM_003853 NM_003872 NM_003874 NM_003908 NM_003924 NM_003926 NM_003927 NM_003930 NM_003949 NM_003950 NM_003966 NM_003970 NM_003993 NM_004004 NM_004030 NM_004036 NM_004080 NM_004101 NM_004109 NM_004133 NM_004177 NM_004200 NM_004285 NM_004309 NM_004321 NM_004338 NM_004348 NM_004430 NM_004438 NM_004452 NM_004468 NM_004475 NM_004505 NM_004514 NM_004526 NM_004584 NM_004589 NM_004603 NM_004630 NM_004635 NM_004672 NM_004681 NM_004703 NM_004710 NM_004711 NM_004712 NM_004745 NM_004863 NM_004869 NM_004871 NM_004873 NM_004973 NM_004992 NM_005000 NM_005036 NM_005045 NM_005072 NM_005073 NM_005095 NM_005098 NM_005168 NM_005173 NM_005202 NM_005262 NM_005282 NM_005327 NM_005354 NM_005358 NM_005400 NM_005442 NM_005474 NM_005479 NM_005498 NM_005499 NM_005501 NM_005512 NM_005515 NM_005534 NM_005542 NM_005597 NM_005598 NM_005615 NM_005629 NM_005649 NM_005658 NM_005675 NM_005715 NM_005730 NM_005736 NM_005737 NM_005740 NM_005789 NM_005814 NM_005876 NM_005920 NM_005989 NM_006011 NM_006013 NM_006035 NM_006079 NM_006128 NM_006130 NM_006131 NM_006132 NM_006139 NM_006141 NM_006190 NM_006195 NM_006225 NM_006231 NM_006233 NM_006247 NM_006315 NM_006322 NM_006332 NM_006352 NM_006355 NM_006371 NM_006460 NM_006465 NM_006549 NM_006561 NM_006572 NM_006593 NM_006640 NM_006646 NM_006656 NM_006695 NM_006705 NM_006711 NM_006720 NM_006732 NM_006736 NM_006738 NM_006742 NM_006780 NM_006836 NM_006847 NM_006861 NM_006869 NM_006877 NM_006931 NM_006943 NM_006952 NM_006991 NM_007030 NM_007033 NM_007047 NM_007048 NM_007055 NM_007070 NM_007081 NM_007103 NM_007200 NM_007229 NM_007271 NM_007277 NM_007283 NM_007287 NM_007288 NM_007289 NM_007306 NM_007322 NM_007331 NM_007335 NM_007336 NM_007338 NM_007345 NM_007353 NM_007355 NM_009588 NM_012071 NM_012076 NM_012079 NM_012081 NM_012102 NM_012119 NM_012140 NM_012154 NM_012179 NM_012204 NM_012205 NM_012219 NM_012232 NM_012252 NM_012258 NM_012259 NM_012297 NM_012304 NM_012306 NM_012317 NM_012332 NM_012346 NM_012384 NM_012468 NM_013231 NM_013243 NM_013245 NM_013301 NM_013304 NM_013313 NM_013323 NM_013373 NM_013412 NM_013434 NM_013441 NM_013952 NM_013953 NM_013992 NM_014033 NM_014039 NM_014048 NM_014207 NM_014212 NM_014220 NM_014235 NM_014240 NM_014293 NM_014344 NM_014351 NM_014353 NM_014354 NM_014361 NM_014383 NM_014397 NM_014459 NM_014468 NM_014583 NM_014586 NM_014610 NM_014636 NM_014642 NM_014646 NM_014656 NM_014661 NM_014665 NM_014676 NM_014680 NM_014731 NM_014732 NM_014734 NM_014738 NM_014744 NM_014755 NM_014772 NM_014788 NM_014801 NM_014830 NM_014835 NM_014837 NM_014844 NM_014853 NM_014867 NM_014890 NM_014898 NM_014901 NM_014902 NM_014909 NM_014910 NM_014913 NM_014919 NM_014921 NM_014931 NM_014934 NM_014964 NM_014974 NM_015002 NM_015008 NM_015033 NM_015035 NM_015044 NM_015074 NM_015080 NM_015082 NM_015085 NM_015088 NM_015094 NM_015101 NM_015141 NM_015166 NM_015191 NM_015202 NM_015229 NM_015256 NM_015264 NM_015266 NM_015285 NM_015299 NM_015323 NM_015347 NM_015359 NM_015369 NM_015417 NM_015443 NM_015446 NM_015470 NM_015492 NM_015564 NM_015577 NM_015601 NM_015610 NM_015631 NM_015695 NM_015720 NM_015726 NM_015995 NM_016003 NM_016035 NM_016048 NM_016057 NM_016107 NM_016118 NM_016169 NM_016217 NM_016219 NM_016239 NM_016250 NM_016264 NM_016376 NM_016418 NM_016510 NM_016553 NM_016575 NM_016592 NM_016611 NM_016613 NM_016652 NM_016836 NM_016839 NM_017410 NM_017443 NM_017506 NM_017521 NM_017547 NM_017565 NM_017588 NM_017590 NM_017607 NM_017653 NM_017731 NM_017732 NM_017787 NM_017789 NM_017797 NM_017799 NM_017849 NM_017851 NM_017927 NM_017928 NM_017956 NM_017967 NM_017968 NM_017999 NM_018015 NM_018052 NM_018054 NM_018108 NM_018112 NM_018125 NM_018144 NM_018185 NM_018205 NM_018214 NM_018239 NM_018244 NM_018252 NM_018265 NM_018277 NM_018292 NM_018326 NM_018364 NM_018378 NM_018407 NM_018409 NM_018416 NM_018424 NM_018427 NM_018484 NM_018557 NM_018658 NM_018667 NM_018702 NM_018708 NM_018717 NM_018719 NM_018891 NM_018898 NM_018899 NM_018900 NM_018901 NM_018902 NM_018903 NM_018904 NM_018905 NM_018906 NM_018907 NM_018908 NM_018909 NM_018910 NM_018911 NM_018947 NM_018961 NM_018984 NM_018995 NM_018998 NM_019007 NM_019008 NM_019034 NM_019063 NM_019066 NM_019072 NM_019843 NM_019863 NM_019885 NM_020038 NM_020119 NM_020133 NM_020134 NM_020170 NM_020180 NM_020200 NM_020315 NM_020325 NM_020348 NM_020440 NM_020462 NM_020529 NM_020554 NM_020655 NM_020657 NM_020699 NM_020713 NM_020762 NM_020764 NM_020778 NM_020796 NM_020804 NM_020808 NM_020851 NM_020856 NM_020868 NM_020896 NM_020914 NM_020956 NM_020967 NM_020977 NM_020994 NM_021006 NM_021036 NM_021104 NM_021135 NM_021136 NM_021164 NM_021168 NM_021174 NM_021216 NM_021249 NM_021267 NM_021620 NM_021638 NM_021643 NM_021794 NM_021905 NM_021940 NM_021946 NM_021961 NM_021962 NM_021973 NM_021976 NM_022074 NM_022079 NM_022081 NM_022097 NM_022103 NM_022138 NM_022153 NM_022170 NM_022356 NM_022452 NM_022458 NM_022480 NM_022748 NM_022750 NM_022779 NM_022781 NM_023011 NM_023088 NM_023928 NM_023931 NM_024050 NM_024296 NM_024344 NM_024492 NM_024544 NM_024554 NM_024607 NM_024652 NM_024656 NM_024667 NM_024689 NM_024707 NM_024735 NM_024736 NM_024742 NM_024770 NM_024794 NM_024798 NM_024830 NM_024865 NM_024877 NM_024915 NM_024940 NM_025009 NM_025031 NM_025106 NM_025150 NM_025197 NM_025204 NM_025209 NM_025220 NM_025232 NM_025251 NM_025261 NM_025268 NM_030621 NM_030626 NM_030661 NM_030665 NM_030667 NM_030668 NM_030669 NM_030670 NM_030671 NM_030780 NM_030782 NM_030786 NM_030806 NM_030884 NM_030907 NM_030915 NM_030949 NM_030964 NM_031207 NM_031268 NM_031297 NM_031411 NM_031416 NM_031439 NM_031448 NM_031463 NM_031469 NM_031478 NM_031490 NM_031849 NM_031857 NM_031860 NM_031886 NM_031892 NM_031908 NM_031925 NM_031939 NM_031945 NM_031992 NM_032023 NM_032051 NM_032108 NM_032169 NM_032174 NM_032214 NM_032251 NM_032281 NM_032286 NM_032287 NM_032295 NM_032329 NM_032349 NM_032371 NM_032558 NM_032569 NM_032572 NM_032664 NM_032711 NM_032727 NM_032732 NM_032785 NM_032809 NM_032843 NM_032863 NM_032883 NM_032899 NM_032982 NM_032983 NM_032984 NM_032988 NM_032992 NM_033058 NM_033069 NM_033133 NM_033221 NM_033260 NM_033271 NM_033393 NM_033407 NM_033420 NM_033446 NM_033496 NM_033497 NM_033498 NM_033500 NM_033548 NM_033550 NM_033624 NM_033631 NM_052821 NM_052834 NM_052839 NM_052847 NM_052851 NM_052896 NM_052899 NM_052933 NM_052934 NM_052937 NM_053042 NM_053044 NM_057159 NM_058163 NM_058172 NM_058178 NM_058180 NM_058197 NM_078467 NM_080425 NM_080426 NM_080476 NM_080588 NM_080591 NM_080594 NM_080687 NM_080915 NM_080917 NM_080927 NM_130783 NM_133332 NM_133333 NM_133334 NM_133338 NM_133339 NM_133340 NM_133341 NM_133342 NM_133343 NM_133344 NM_133371 NM_133373 NM_133444 NM_133452 NM_133468 NM_133632 NM_133633 NM_134324 NM_134423 NM_138298 NM_138385 NM_138391 NM_138440 NM_138442 NM_138499 NM_138640 NM_138732 NM_138734 NM_138778 NM_138793 NM_138934 NM_138969 NM_139016 NM_139202 NM_139250 NM_139278 NM_144498 NM_144588 NM_144613 NM_144616 NM_144617 NM_144623 NM_144671 NM_144677 NM_144767 NM_144994 NM_145117 NM_145166 NM_145173 NM_145251 NM_145284 NM_145303 NM_145311 NM_145638 NM_145730 NM_145798 NM_145858 NM_145912 NM_145918 NM_147128 NM_147202 NM_148171 NM_148921 NM_148923 NM_152233 NM_152244 NM_152257 NM_152264 NM_152265 NM_152339 NM_152340 NM_152357 NM_152384 NM_152416 NM_152451 NM_152458 NM_152472 NM_152482 NM_152496 NM_152624 NM_152689 NM_152754 NM_152757 NM_152760 NM_152840 NM_152841 NM_152842 NM_153023 NM_153031 NM_153032 NM_153202 NM_153231 NM_153239 NM_153266 NM_153337 NM_153365 NM_153449 NM_153451 NM_153462 NM_153463 NM_153499 NM_153500 NM_153619 NM_153631 NM_153632 NM_153714 NM_153718 NM_153719 NM_153812 NM_156036 NM_170741 NM_170742 NM_172214 NM_172215 NM_172216 NM_172226 NM_172231 NM_172239 NM_172377 NM_172386 NM_173054 NM_173055 NM_173056 NM_173057 NM_173058 NM_173075 NM_173087 NM_173088 NM_173089 NM_173090 NM_173156 NM_173510 NM_173535 NM_173557 NM_173561 NM_173584 NM_173618 NM_173646 NM_173649 NM_173650 NM_173669 NM_173680 NM_173795 NM_173800 NM_174901 NM_174917 NM_174934 NM_174953 NM_174954 NM_174955 NM_174956 NM_174957 NM_174972 NM_175058 NM_175077 NM_175566 NM_175619 NM_175884 NM_175901 NM_176095 NM_176816 NM_176863 NM_176874 NM_177414 NM_177438 NM_177549 NM_177550 NM_177967 NM_177977 NM_177999 NM_178006 NM_178007 NM_178145 NM_178225 NM_178226 NM_178432 NM_178483 NM_178507 NM_178514 NM_178817 NM_178840 NM_178864 NM_181050 NM_181355 NM_181430 NM_181431 NM_181481 NM_181482 NM_181483 NM_181521 NM_181532 NM_181657 NM_181826 NM_181827 NM_181828 NM_181829 NM_181830 NM_181832 NM_181834 NM_181835 NM_182509 NM_182513 NM_182531 NM_182534 NM_182547 NM_182557 NM_182560 NM_182628 NM_182752 NM_182812 NM_182925 NM_182964 NM_182970 NM_183006 NM_183238 NM_183385 NM_183414 NM_194252 NM_194278 NM_194288 NM_194295 NM_194303 NM_194309 NM_194310 NM_194324 NM_194326 NM_194328 NM_194329 NM_194330 NM_194331 NM_194332 NM_194352 NM_194356 NM_194430 NM_194431 NM_198066 NM_198151 NM_198181 NM_198253 NM_198254 NM_198255 NM_198336 NM_198337 NM_198451 NM_198462 NM_198504 NM_198521 NM_198527 NM_198562 NM_198563 NM_198582 NM_198595 NM_198835 NM_198845 NM_198846 NM_198847 NM_198955 NM_198968 NM_199054 NM_199205 NM_199265 NM_199280 NM_199296 NM_199335 NM_199343 NM_199487 NM_199513 NM_201266 NM_201279 NM_201432 NM_201433 NM_201535 NM_201536 NM_201537 NM_201538 NM_201539 NM_201540 NM_201541 NM_201565 NM_201568 NM_201569 NM_201570 NM_201571 NM_201572 NM_201590 NM_201593 NM_201596 NM_201597 NM_201628 NM_203329 NM_203330 NM_203331 NM_203365 NM_203400 NM_203504 NM_203505 NM_205768 NM_205843 NM_205857 NM_206852 NM_206857 NM_207006 NM_207113 NM_207119 NM_207309 NM_207324 NM_207325 NM_207333 NM_207362 NM_207370 NM_207395 NM_207405 NM_207418 NM_207451 NM_207458 NM_207467 NM_207502 NM_207510 NM_212464 NM_212465 NM_212467 NM_212469 NM_213568 NM_213612 XM_032996 XM_039733 XM_046581 XM_051017 XM_084529 XM_097580 XM_114166 XM_117117 XM_166320 XM_171855 XM_208990 XM_209187 XM_211345 XM_290401 XM_290737 XM_293687 XM_294765 XM_370899 XM_370932 XM_371176 XM_371214 XM_371254 XM_371461 XM_371474 XM_371488 XM_371623 XM_371717 XM_371801 XM_372267 XM_373474 XM_373561 XM_373690 XM_373786 XM_373843 XM_373922 XM_374414 XM_374769 XM_375430 XM_375500 XM_375558 XM_375629 XM_375697 XM_375803 XM_375928 XM_376018 XM_376303 XM_376463 XM_376558 XM_376586 XM_376587 XM_376784 XM_376902 XM_377742 XM_378327 XM_378329 XM_378389 XM_378411 XM_378437 XM_378456 XM_378620 XM_378625 XM_378628 XM_378708 XM_378712 XM_378742 XM_378799 XM_378823 XM_378843 XM_378949 XM_378982 XM_379023 XM_379030 XM_379065 XM_379069 XM_379145 XM_379146 XM_379164 XM_379180 XM_379183 XM_379249 XM_379254 XM_379391 XM_379398 XM_379406 XM_379437 XM_379458 XM_379595 XM_379605 XM_379619 XM_379623 XM_379635 XM_379637 XM_379656 XM_379704 XM_379798 XM_379877 XM_380121 XM_495807 XM_495881 XM_495902 XM_496036 XM_496081 XM_496088 XM_496103 XM_496351 XM_496575 XM_496577 XM_496690 XM_496692 XM_496836 XM_496959 XM_496966 XM_496976 XM_496981 XM_496982 XM_496983 XM_496984 XM_496985 XM_498465 XM_498500 XM_498534 XM_498567 XM_498572 XM_498614 XM_498651 XM_498661 XM_498814 XM_498862 XM_498884 XM_498904 XM_498929 XM_498961 XM_498972 XM_498997 XM_499008 XM_499084 XM_499105 XM_499168 XM_499502 XM_499522 XM_499539 XM_499595 XR_000184 XR_000194 XR_000263 XR_000265 XR_000266 XR_000294	Genes with multiple seed matches: NM_000332 NM_000632 NM_000641 NM_000744 NM_000902 NM_001003674 NM_001003675 NM_001004302 NM_001005404 NM_001007254 NM_001012733 NM_001012734 NM_001012982 NM_001013693 NM_001023565 NM_001024596 NM_001127 NM_001421 NM_001695 NM_002268 NM_002428 NM_003036 NM_003224 NM_003605 NM_003681 NM_003872 NM_003949 NM_003950 NM_004030 NM_004109 NM_004133 NM_004338 NM_004438 NM_004992 NM_005098 NM_005327 NM_005658 NM_005737 NM_006132 NM_006738 NM_006931 NM_006943 NM_007030 NM_007047 NM_007200 NM_007229 NM_007287 NM_007288 NM_007289 NM_007335 NM_007336 NM_007338 NM_007353 NM_012259 NM_013301 NM_013313 NM_014207 NM_014665 NM_014801 NM_014844 NM_014919 NM_015082 NM_015094 NM_015101 NM_015191 NM_015229 NM_015266 NM_015347 NM_015470 NM_016057 NM_016611 NM_017799 NM_019008 NM_020133 NM_020956 NM_022480 NM_023011 NM_023928 NM_024492 NM_024667 NM_025197 NM_030626 NM_030670 NM_030671 NM_030949 NM_032287 NM_032295 NM_032569 NM_033407 NM_052839 NM_052899 NM_080687 NM_133332 NM_133333 NM_134324 NM_138298 NM_138640 NM_144767 NM_145166 NM_145730 NM_152384 NM_153031 NM_172239 NM_173649 NM_173680 NM_173795 NM_174934 NM_176095 NM_177977 NM_178225 NM_178226 NM_178507 NM_181481 NM_181482 NM_181483 NM_182513 NM_182534 NM_194278 NM_201266 NM_201279 NM_207113 NM_207451 NM_207458 XM_371214 XM_373561 XM_375697 XM_376558 XM_378456 XM_379030 XM_379145 XM_379391 XM_498572

For Details about the algorithm please see
"3' UTR seed matches, but not overall identity, are associated with RNAi off-targets" ,Nature Methods - 3, 199 - 204 (2006)

VIRsiRNAdb

Database of Viral siRNA / shRNA