VIRsiRNAdb

Predicted off-targets seeds for siRNA "atcggtgtgtatgctaaag" Using siRNA Seed Locator Algorithm

siRNA Seed Locator
Total Genes with at least one seed match :1386.
Total Genes with multiple seed matches: 88.
Genes with at least one seed match: NM_000046 NM_000077 NM_000080 NM_000109 NM_000114 NM_000131 NM_000141 NM_000142 NM_000199 NM_000207 NM_000254 NM_000278 NM_000330 NM_000333 NM_000356 NM_000376 NM_000385 NM_000389 NM_000391 NM_000423 NM_000427 NM_000445 NM_000452 NM_000500 NM_000520 NM_000527 NM_000597 NM_000599 NM_000639 NM_000682 NM_000683 NM_000724 NM_000746 NM_000759 NM_000828 NM_000843 NM_000877 NM_000887 NM_000891 NM_000914 NM_000916 NM_000931 NM_001001188 NM_001001344 NM_001001349 NM_001001485 NM_001001486 NM_001001487 NM_001001678 NM_001001688 NM_001001716 NM_001001795 NM_001001895 NM_001001928 NM_001001929 NM_001001930 NM_001002233 NM_001002762 NM_001002814 NM_001002847 NM_001003407 NM_001003408 NM_001003716 NM_001003794 NM_001003809 NM_001003940 NM_001003942 NM_001003943 NM_001004127 NM_001004335 NM_001004336 NM_001004352 NM_001004434 NM_001004439 NM_001004441 NM_001005366 NM_001005387 NM_001005388 NM_001005412 NM_001005473 NM_001006115 NM_001006939 NM_001007225 NM_001007258 NM_001007262 NM_001007559 NM_001008530 NM_001008537 NM_001008568 NM_001008569 NM_001008570 NM_001008571 NM_001008656 NM_001008658 NM_001008707 NM_001008744 NM_001008745 NM_001009568 NM_001009612 NM_001009880 NM_001009992 NM_001009996 NM_001010976 NM_001011537 NM_001011541 NM_001011649 NM_001011703 NM_001012267 NM_001012418 NM_001012420 NM_001012423 NM_001012426 NM_001012427 NM_001012651 NM_001012659 NM_001012711 NM_001012731 NM_001012733 NM_001012982 NM_001013404 NM_001013624 NM_001013675 NM_001013678 NM_001013687 NM_001013718 NM_001013728 NM_001013843 NM_001014374 NM_001014440 NM_001014797 NM_001015886 NM_001017395 NM_001017405 NM_001017430 NM_001017431 NM_001017535 NM_001017916 NM_001017917 NM_001017918 NM_001017989 NM_001018108 NM_001018113 NM_001020818 NM_001020819 NM_001020820 NM_001020821 NM_001023563 NM_001024736 NM_001024912 NM_001025081 NM_001025090 NM_001025092 NM_001025094 NM_001025098 NM_001025101 NM_001031 NM_001045 NM_001080 NM_001085 NM_001093 NM_001096 NM_001102 NM_001105 NM_001119 NM_001124 NM_001127 NM_001149 NM_001190 NM_001194 NM_001198 NM_001222 NM_001243 NM_001298 NM_001305 NM_001331 NM_001348 NM_001372 NM_001386 NM_001387 NM_001389 NM_001390 NM_001420 NM_001481 NM_001486 NM_001532 NM_001534 NM_001560 NM_001585 NM_001620 NM_001712 NM_001715 NM_001728 NM_001806 NM_001824 NM_001846 NM_001894 NM_001899 NM_001913 NM_001915 NM_001941 NM_002006 NM_002033 NM_002052 NM_002071 NM_002111 NM_002142 NM_002165 NM_002190 NM_002224 NM_002230 NM_002237 NM_002289 NM_002313 NM_002318 NM_002332 NM_002342 NM_002360 NM_002375 NM_002385 NM_002401 NM_002414 NM_002416 NM_002469 NM_002474 NM_002501 NM_002547 NM_002568 NM_002641 NM_002702 NM_002725 NM_002731 NM_002749 NM_002753 NM_002760 NM_002762 NM_002791 NM_002829 NM_002881 NM_002911 NM_003011 NM_003020 NM_003026 NM_003040 NM_003042 NM_003055 NM_003098 NM_003107 NM_003110 NM_003170 NM_003304 NM_003324 NM_003347 NM_003371 NM_003388 NM_003405 NM_003458 NM_003483 NM_003502 NM_003559 NM_003576 NM_003605 NM_003612 NM_003636 NM_003639 NM_003644 NM_003681 NM_003749 NM_003753 NM_003768 NM_003774 NM_003822 NM_003872 NM_003889 NM_003899 NM_003918 NM_003941 NM_003955 NM_003959 NM_003987 NM_003988 NM_003989 NM_003990 NM_004006 NM_004007 NM_004009 NM_004010 NM_004011 NM_004012 NM_004013 NM_004014 NM_004015 NM_004016 NM_004017 NM_004018 NM_004020 NM_004021 NM_004022 NM_004023 NM_004098 NM_004114 NM_004195 NM_004256 NM_004273 NM_004277 NM_004296 NM_004384 NM_004385 NM_004434 NM_004468 NM_004485 NM_004488 NM_004505 NM_004513 NM_004514 NM_004567 NM_004571 NM_004610 NM_004624 NM_004662 NM_004737 NM_004746 NM_004772 NM_004793 NM_004798 NM_004834 NM_004859 NM_004884 NM_004893 NM_004907 NM_004913 NM_004947 NM_004959 NM_004961 NM_004992 NM_005027 NM_005036 NM_005044 NM_005046 NM_005053 NM_005069 NM_005082 NM_005093 NM_005094 NM_005118 NM_005134 NM_005137 NM_005140 NM_005157 NM_005173 NM_005187 NM_005228 NM_005244 NM_005248 NM_005262 NM_005357 NM_005427 NM_005446 NM_005450 NM_005456 NM_005458 NM_005506 NM_005529 NM_005534 NM_005542 NM_005582 NM_005597 NM_005606 NM_005610 NM_005631 NM_005637 NM_005658 NM_005677 NM_005699 NM_005737 NM_005740 NM_005806 NM_005813 NM_005817 NM_005821 NM_005828 NM_005835 NM_005853 NM_005882 NM_005883 NM_005895 NM_005908 NM_006034 NM_006061 NM_006074 NM_006112 NM_006134 NM_006167 NM_006202 NM_006215 NM_006234 NM_006261 NM_006278 NM_006282 NM_006296 NM_006315 NM_006350 NM_006351 NM_006393 NM_006493 NM_006519 NM_006524 NM_006538 NM_006548 NM_006593 NM_006598 NM_006640 NM_006643 NM_006653 NM_006658 NM_006673 NM_006701 NM_006711 NM_006713 NM_006720 NM_006738 NM_006743 NM_006772 NM_006804 NM_006811 NM_006858 NM_006861 NM_006873 NM_006877 NM_006908 NM_006925 NM_007017 NM_007030 NM_007038 NM_007127 NM_007144 NM_007167 NM_007174 NM_007200 NM_007202 NM_007203 NM_007210 NM_007283 NM_007313 NM_007321 NM_007325 NM_007338 NM_007345 NM_009586 NM_012068 NM_012072 NM_012083 NM_012121 NM_012140 NM_012186 NM_012211 NM_012304 NM_012306 NM_012308 NM_012315 NM_012425 NM_013247 NM_013272 NM_013304 NM_013305 NM_013336 NM_013351 NM_013397 NM_013432 NM_013440 NM_013446 NM_013451 NM_014023 NM_014157 NM_014181 NM_014189 NM_014190 NM_014235 NM_014249 NM_014258 NM_014292 NM_014310 NM_014344 NM_014393 NM_014405 NM_014494 NM_014556 NM_014583 NM_014604 NM_014610 NM_014616 NM_014631 NM_014636 NM_014653 NM_014657 NM_014663 NM_014732 NM_014742 NM_014743 NM_014788 NM_014789 NM_014792 NM_014801 NM_014836 NM_014850 NM_014867 NM_014891 NM_014910 NM_014919 NM_014931 NM_014935 NM_014940 NM_014957 NM_014988 NM_015008 NM_015035 NM_015079 NM_015082 NM_015086 NM_015090 NM_015101 NM_015103 NM_015107 NM_015124 NM_015133 NM_015151 NM_015170 NM_015178 NM_015210 NM_015213 NM_015229 NM_015233 NM_015236 NM_015259 NM_015264 NM_015274 NM_015282 NM_015286 NM_015288 NM_015310 NM_015316 NM_015326 NM_015327 NM_015330 NM_015338 NM_015385 NM_015386 NM_015417 NM_015444 NM_015447 NM_015457 NM_015476 NM_015545 NM_015553 NM_015558 NM_015577 NM_015622 NM_015644 NM_015666 NM_015995 NM_016018 NM_016021 NM_016083 NM_016086 NM_016114 NM_016135 NM_016143 NM_016170 NM_016196 NM_016235 NM_016255 NM_016284 NM_016308 NM_016332 NM_016338 NM_016376 NM_016436 NM_016522 NM_016534 NM_016598 NM_016605 NM_016614 NM_016651 NM_016735 NM_017438 NM_017548 NM_017554 NM_017565 NM_017586 NM_017595 NM_017626 NM_017644 NM_017686 NM_017732 NM_017744 NM_017797 NM_017799 NM_017804 NM_017866 NM_017896 NM_017923 NM_017927 NM_017933 NM_017968 NM_017974 NM_017982 NM_017999 NM_018006 NM_018027 NM_018028 NM_018045 NM_018052 NM_018110 NM_018114 NM_018144 NM_018181 NM_018193 NM_018203 NM_018209 NM_018249 NM_018312 NM_018319 NM_018385 NM_018393 NM_018409 NM_018669 NM_018670 NM_018683 NM_018702 NM_018715 NM_018839 NM_018890 NM_018941 NM_018961 NM_018977 NM_018999 NM_019034 NM_019046 NM_019114 NM_019605 NM_019616 NM_019887 NM_020062 NM_020125 NM_020182 NM_020208 NM_020215 NM_020239 NM_020385 NM_020433 NM_020440 NM_020462 NM_020472 NM_020473 NM_020546 NM_020655 NM_020708 NM_020769 NM_020774 NM_020804 NM_020808 NM_020813 NM_020834 NM_020870 NM_020882 NM_020914 NM_020919 NM_020946 NM_020956 NM_020960 NM_020987 NM_020988 NM_021047 NM_021079 NM_021116 NM_021137 NM_021155 NM_021202 NM_021619 NM_021638 NM_021649 NM_021724 NM_021905 NM_021949 NM_021984 NM_021987 NM_021990 NM_021991 NM_022002 NM_022062 NM_022099 NM_022103 NM_022134 NM_022153 NM_022371 NM_022405 NM_022468 NM_022469 NM_022474 NM_022492 NM_022567 NM_022718 NM_022748 NM_022822 NM_022834 NM_022842 NM_022844 NM_022909 NM_022912 NM_022917 NM_022965 NM_022969 NM_022970 NM_022972 NM_022975 NM_023028 NM_023029 NM_023030 NM_023031 NM_023076 NM_023087 NM_023088 NM_023928 NM_023947 NM_024007 NM_024036 NM_024048 NM_024101 NM_024329 NM_024335 NM_024423 NM_024510 NM_024527 NM_024618 NM_024637 NM_024650 NM_024652 NM_024755 NM_024770 NM_024787 NM_024791 NM_024818 NM_024832 NM_024865 NM_024871 NM_024894 NM_024906 NM_024909 NM_024922 NM_024935 NM_024940 NM_025084 NM_025140 NM_025151 NM_025208 NM_025240 NM_030581 NM_030621 NM_030622 NM_030636 NM_030775 NM_030803 NM_030805 NM_030884 NM_030907 NM_030915 NM_030949 NM_030965 NM_030979 NM_031215 NM_031227 NM_031228 NM_031265 NM_031281 NM_031310 NM_031431 NM_031444 NM_031460 NM_031462 NM_031474 NM_031476 NM_031484 NM_031490 NM_031897 NM_031939 NM_031949 NM_031964 NM_031966 NM_032222 NM_032242 NM_032251 NM_032262 NM_032281 NM_032288 NM_032329 NM_032353 NM_032369 NM_032421 NM_032484 NM_032506 NM_032513 NM_032521 NM_032552 NM_032590 NM_032603 NM_032622 NM_032632 NM_032642 NM_032738 NM_032740 NM_032797 NM_032827 NM_032854 NM_032916 NM_032950 NM_032975 NM_032980 NM_032983 NM_032984 NM_032988 NM_033013 NM_033087 NM_033135 NM_033181 NM_033221 NM_033238 NM_033262 NM_033317 NM_033386 NM_033387 NM_033392 NM_033439 NM_033503 NM_033642 NM_052839 NM_052847 NM_052876 NM_052896 NM_052928 NM_052978 NM_052995 NM_053045 NM_053053 NM_053279 NM_053286 NM_058169 NM_058189 NM_058195 NM_058197 NM_058217 NM_058240 NM_078467 NM_078483 NM_080417 NM_080538 NM_080539 NM_080540 NM_080541 NM_080542 NM_080543 NM_080544 NM_080594 NM_080612 NM_080665 NM_080668 NM_080789 NM_080790 NM_080836 NM_080928 NM_130469 NM_130793 NM_130807 NM_130830 NM_133330 NM_133331 NM_133332 NM_133333 NM_133335 NM_133337 NM_133443 NM_133490 NM_133642 NM_133646 NM_138284 NM_138298 NM_138322 NM_138373 NM_138393 NM_138396 NM_138457 NM_138499 NM_138567 NM_138609 NM_138610 NM_138620 NM_138621 NM_138622 NM_138623 NM_138624 NM_138625 NM_138626 NM_138627 NM_138727 NM_138728 NM_138929 NM_138930 NM_138981 NM_139028 NM_139032 NM_139033 NM_139034 NM_139062 NM_139159 NM_139161 NM_139235 NM_139265 NM_139277 NM_139284 NM_139320 NM_144590 NM_144599 NM_144617 NM_144671 NM_144767 NM_144778 NM_144962 NM_145013 NM_145027 NM_145052 NM_145056 NM_145068 NM_145074 NM_145117 NM_145173 NM_145188 NM_145189 NM_145233 NM_145265 NM_145272 NM_145273 NM_145282 NM_145349 NM_145350 NM_145351 NM_145646 NM_145686 NM_145687 NM_145728 NM_145730 NM_145799 NM_145814 NM_145815 NM_145818 NM_145912 NM_147150 NM_147156 NM_148894 NM_148902 NM_148911 NM_148980 NM_152221 NM_152235 NM_152253 NM_152287 NM_152299 NM_152339 NM_152340 NM_152454 NM_152458 NM_152461 NM_152464 NM_152470 NM_152480 NM_152488 NM_152499 NM_152554 NM_152557 NM_152619 NM_152633 NM_152673 NM_152678 NM_152702 NM_152705 NM_152715 NM_152719 NM_152724 NM_152757 NM_152760 NM_152763 NM_152776 NM_152840 NM_152906 NM_152942 NM_153008 NM_153022 NM_153038 NM_153214 NM_153231 NM_153239 NM_153256 NM_153271 NM_153273 NM_153350 NM_153451 NM_153456 NM_153717 NM_170721 NM_170740 NM_170743 NM_172110 NM_172111 NM_172112 NM_172113 NM_172130 NM_172169 NM_172170 NM_172171 NM_172172 NM_172173 NM_172217 NM_172219 NM_172220 NM_173042 NM_173043 NM_173064 NM_173065 NM_173502 NM_173536 NM_173558 NM_173583 NM_173588 NM_173610 NM_173646 NM_173652 NM_173658 NM_173680 NM_173795 NM_174878 NM_174882 NM_174911 NM_174917 NM_174953 NM_174954 NM_174955 NM_174956 NM_174957 NM_174958 NM_175047 NM_175061 NM_175609 NM_175736 NM_175834 NM_175864 NM_175884 NM_175892 NM_175898 NM_175923 NM_175931 NM_176799 NM_176801 NM_176871 NM_177438 NM_177532 NM_177978 NM_177979 NM_178226 NM_178238 NM_178448 NM_178468 NM_178509 NM_178520 NM_178523 NM_178562 NM_178831 NM_178850 NM_181050 NM_181353 NM_181358 NM_181430 NM_181431 NM_181500 NM_181552 NM_181709 NM_181738 NM_181826 NM_181827 NM_182483 NM_182494 NM_182509 NM_182520 NM_182533 NM_182534 NM_182546 NM_182578 NM_182586 NM_182596 NM_182605 NM_182635 NM_182740 NM_182833 NM_182907 NM_182932 NM_182933 NM_182936 NM_182948 NM_182964 NM_182978 NM_183002 NM_183075 NM_183397 NM_194290 NM_194303 NM_194312 NM_197956 NM_197973 NM_197976 NM_198074 NM_198097 NM_198098 NM_198157 NM_198225 NM_198268 NM_198269 NM_198327 NM_198328 NM_198329 NM_198334 NM_198335 NM_198337 NM_198440 NM_198484 NM_198537 NM_198545 NM_198547 NM_198553 NM_198560 NM_198563 NM_198589 NM_198590 NM_198591 NM_198595 NM_198829 NM_198830 NM_198846 NM_198890 NM_198900 NM_198920 NM_198935 NM_198939 NM_199050 NM_199121 NM_199163 NM_199169 NM_199170 NM_199171 NM_199331 NM_199332 NM_199355 NM_201266 NM_201279 NM_201348 NM_201378 NM_201379 NM_201380 NM_201381 NM_201382 NM_201383 NM_201384 NM_201431 NM_201432 NM_201433 NM_201550 NM_201565 NM_201570 NM_201571 NM_201572 NM_201590 NM_201593 NM_201596 NM_201597 NM_201628 NM_203303 NM_203305 NM_203348 NM_203351 NM_203353 NM_203426 NM_203451 NM_203457 NM_205843 NM_205855 NM_205860 NM_206887 NM_207003 NM_207032 NM_207033 NM_207034 NM_207304 NM_207309 NM_207324 NM_207337 NM_207348 NM_207367 NM_207373 NM_207405 NM_207451 NM_207460 NM_207462 NM_207465 NM_207470 NM_207503 NM_207510 NM_207581 XM_029353 XM_039393 XM_040592 XM_042833 XM_048592 XM_056455 XM_059037 XM_084852 XM_085463 XM_097977 XM_166140 XM_167044 XM_167147 XM_170658 XM_171855 XM_208522 XM_208930 XM_211367 XM_290342 XM_290734 XM_291671 XM_292160 XM_293380 XM_294960 XM_370603 XM_370654 XM_370723 XM_370758 XM_370837 XM_370843 XM_370917 XM_371074 XM_371120 XM_371177 XM_371181 XM_371214 XM_371374 XM_371672 XM_371820 XM_372019 XM_372028 XM_372030 XM_372193 XM_372233 XM_373433 XM_373561 XM_373653 XM_373693 XM_373742 XM_373763 XM_373786 XM_373800 XM_373838 XM_374110 XM_374141 XM_375090 XM_375152 XM_375602 XM_375821 XM_376018 XM_376049 XM_376207 XM_376241 XM_376607 XM_377002 XM_378272 XM_378301 XM_378507 XM_378544 XM_378608 XM_378620 XM_378648 XM_378678 XM_378684 XM_378700 XM_378708 XM_378738 XM_378750 XM_378756 XM_378810 XM_378823 XM_378946 XM_378949 XM_378993 XM_379023 XM_379041 XM_379060 XM_379097 XM_379100 XM_379118 XM_379163 XM_379214 XM_379273 XM_379391 XM_379395 XM_379398 XM_379417 XM_379459 XM_379597 XM_379608 XM_379637 XM_379642 XM_379643 XM_379648 XM_379668 XM_379694 XM_379736 XM_379827 XM_379840 XM_379927 XM_495888 XM_495918 XM_495937 XM_495950 XM_496143 XM_496543 XM_496547 XM_496584 XM_496587 XM_496618 XM_496876 XM_496907 XM_497080 XM_497160 XM_498449 XM_498459 XM_498473 XM_498481 XM_498497 XM_498502 XM_498540 XM_498571 XM_498582 XM_498589 XM_498614 XM_498617 XM_498629 XM_498636 XM_498649 XM_498652 XM_498658 XM_498683 XM_498696 XM_498724 XM_498728 XM_498738 XM_498739 XM_498751 XM_498829 XM_498859 XM_498884 XM_498894 XM_498965 XM_498984 XM_498989 XM_499021 XM_499054 XM_499093 XM_499293 XM_499343 XM_499499 XM_499501 XM_499552 XM_499579 XM_499589 XR_000184 XR_000190 XR_000195 XR_000254 XR_000259 XR_000265 XR_000268 XR_000293 XR_000294	Genes with multiple seed matches: NM_000131 NM_000599 NM_000843 NM_001004336 NM_001008745 NM_001012651 NM_001014440 NM_001080 NM_001127 NM_001243 NM_002230 NM_003347 NM_004505 NM_004567 NM_004834 NM_005069 NM_006234 NM_006673 NM_007030 NM_014310 NM_014732 NM_014867 NM_014935 NM_015124 NM_015229 NM_015233 NM_015286 NM_015310 NM_015644 NM_017744 NM_017968 NM_017999 NM_019616 NM_020215 NM_020440 NM_020546 NM_020914 NM_020988 NM_021116 NM_022062 NM_024922 NM_024935 NM_025140 NM_030915 NM_031964 NM_033238 NM_080665 NM_130469 NM_138284 NM_138727 NM_138728 NM_144617 NM_145686 NM_145687 NM_145728 NM_145730 NM_152253 NM_152461 NM_152906 NM_152942 NM_153239 NM_170740 NM_173795 NM_175898 NM_181552 NM_181826 NM_181827 NM_182509 NM_194290 NM_194303 NM_198157 NM_198327 NM_198328 NM_198939 NM_203305 NM_203426 NM_207367 NM_207451 NM_207462 XM_040592 XM_371214 XM_375090 XM_379391 XM_379643 XM_498589 XM_498649 XM_498829 XM_498859

For Details about the algorithm please see
"3' UTR seed matches, but not overall identity, are associated with RNAi off-targets" ,Nature Methods - 3, 199 - 204 (2006)

VIRsiRNAdb

Database of Viral siRNA / shRNA