VIRsiRNAdb

Predicted off-targets seeds for siRNA "agguucggaugguucgaga" Using siRNA Seed Locator Algorithm

siRNA Seed Locator
Total Genes with at least one seed match :1419.
Total Genes with multiple seed matches: 105.
Genes with at least one seed match: NM_000038 NM_000051 NM_000052 NM_000081 NM_000112 NM_000161 NM_000185 NM_000230 NM_000298 NM_000314 NM_000317 NM_000330 NM_000332 NM_000337 NM_000355 NM_000373 NM_000376 NM_000399 NM_000415 NM_000417 NM_000430 NM_000476 NM_000527 NM_000529 NM_000554 NM_000641 NM_000647 NM_000664 NM_000671 NM_000702 NM_000743 NM_000745 NM_000767 NM_000779 NM_000800 NM_000810 NM_000821 NM_000843 NM_000877 NM_000890 NM_000902 NM_000910 NM_000923 NM_000951 NM_000958 NM_000997 NM_001001188 NM_001001331 NM_001001342 NM_001001419 NM_001001420 NM_001001433 NM_001001434 NM_001001437 NM_001001557 NM_001001665 NM_001001687 NM_001001696 NM_001001707 NM_001001716 NM_001001851 NM_001001927 NM_001001928 NM_001001929 NM_001001930 NM_001002026 NM_001002034 NM_001002233 NM_001002814 NM_001002838 NM_001002860 NM_001002861 NM_001002920 NM_001003399 NM_001003652 NM_001003674 NM_001003675 NM_001003800 NM_001004299 NM_001004307 NM_001004322 NM_001004339 NM_001004342 NM_001004433 NM_001004707 NM_001005365 NM_001005387 NM_001005739 NM_001005753 NM_001006116 NM_001006617 NM_001006619 NM_001006620 NM_001006621 NM_001006932 NM_001007024 NM_001007025 NM_001007169 NM_001007267 NM_001007471 NM_001007535 NM_001007543 NM_001008224 NM_001008392 NM_001008393 NM_001008493 NM_001008781 NM_001009610 NM_001009880 NM_001009957 NM_001010846 NM_001011664 NM_001011666 NM_001011718 NM_001012329 NM_001012393 NM_001012418 NM_001012729 NM_001013619 NM_001013629 NM_001013664 NM_001013667 NM_001013701 NM_001013706 NM_001013726 NM_001014342 NM_001014373 NM_001014440 NM_001015045 NM_001017396 NM_001017405 NM_001017430 NM_001017431 NM_001017526 NM_001017535 NM_001017916 NM_001017917 NM_001017918 NM_001017923 NM_001017970 NM_001017980 NM_001018058 NM_001018095 NM_001018099 NM_001024024 NM_001024070 NM_001024071 NM_001024380 NM_001024381 NM_001024455 NM_001024592 NM_001024603 NM_001024808 NM_001044 NM_001050 NM_001055 NM_001066 NM_001109 NM_001116 NM_001128 NM_001198 NM_001217 NM_001226 NM_001230 NM_001242 NM_001257 NM_001259 NM_001286 NM_001287 NM_001297 NM_001358 NM_001362 NM_001375 NM_001417 NM_001427 NM_001440 NM_001455 NM_001515 NM_001543 NM_001544 NM_001636 NM_001646 NM_001663 NM_001676 NM_001683 NM_001802 NM_001831 NM_001859 NM_001914 NM_001915 NM_001918 NM_001928 NM_001939 NM_001946 NM_001980 NM_002029 NM_002037 NM_002086 NM_002106 NM_002126 NM_002128 NM_002158 NM_002196 NM_002230 NM_002246 NM_002253 NM_002304 NM_002309 NM_002310 NM_002359 NM_002474 NM_002480 NM_002481 NM_002541 NM_002544 NM_002545 NM_002581 NM_002604 NM_002650 NM_002716 NM_002718 NM_002719 NM_002720 NM_002739 NM_002765 NM_002773 NM_002822 NM_002823 NM_002827 NM_002847 NM_002849 NM_002868 NM_002874 NM_002895 NM_002908 NM_002912 NM_002957 NM_002983 NM_002985 NM_003033 NM_003045 NM_003051 NM_003070 NM_003107 NM_003119 NM_003152 NM_003157 NM_003185 NM_003189 NM_003221 NM_003222 NM_003224 NM_003236 NM_003290 NM_003291 NM_003307 NM_003309 NM_003328 NM_003347 NM_003389 NM_003399 NM_003417 NM_003418 NM_003441 NM_003455 NM_003468 NM_003574 NM_003676 NM_003679 NM_003683 NM_003763 NM_003806 NM_003807 NM_003838 NM_003874 NM_003879 NM_003885 NM_003895 NM_003913 NM_003929 NM_003939 NM_003941 NM_003947 NM_004091 NM_004207 NM_004273 NM_004295 NM_004296 NM_004337 NM_004338 NM_004352 NM_004356 NM_004358 NM_004370 NM_004371 NM_004405 NM_004419 NM_004423 NM_004536 NM_004549 NM_004561 NM_004562 NM_004588 NM_004618 NM_004621 NM_004622 NM_004646 NM_004685 NM_004729 NM_004732 NM_004735 NM_004745 NM_004760 NM_004804 NM_004842 NM_004863 NM_004871 NM_004904 NM_004928 NM_005032 NM_005036 NM_005044 NM_005127 NM_005128 NM_005140 NM_005149 NM_005151 NM_005187 NM_005188 NM_005206 NM_005242 NM_005279 NM_005417 NM_005435 NM_005502 NM_005503 NM_005504 NM_005509 NM_005542 NM_005615 NM_005629 NM_005687 NM_005723 NM_005740 NM_005793 NM_005808 NM_005817 NM_005821 NM_005839 NM_005840 NM_005844 NM_005882 NM_005885 NM_005895 NM_005897 NM_005901 NM_005903 NM_005935 NM_005986 NM_006025 NM_006028 NM_006060 NM_006062 NM_006122 NM_006145 NM_006162 NM_006195 NM_006206 NM_006213 NM_006226 NM_006237 NM_006283 NM_006335 NM_006371 NM_006399 NM_006500 NM_006508 NM_006538 NM_006546 NM_006564 NM_006578 NM_006614 NM_006620 NM_006621 NM_006670 NM_006675 NM_006695 NM_006713 NM_006717 NM_006731 NM_006736 NM_006743 NM_006859 NM_006931 NM_006941 NM_006955 NM_006974 NM_006989 NM_006991 NM_007006 NM_007032 NM_007055 NM_007123 NM_007137 NM_007175 NM_007249 NM_007287 NM_007288 NM_007289 NM_007335 NM_007336 NM_007338 NM_007344 NM_007350 NM_007368 NM_012076 NM_012192 NM_012197 NM_012229 NM_012252 NM_012281 NM_012288 NM_012309 NM_012317 NM_012346 NM_012396 NM_012434 NM_012463 NM_012465 NM_012468 NM_013236 NM_013301 NM_013332 NM_013336 NM_013354 NM_013372 NM_013987 NM_013988 NM_014005 NM_014028 NM_014117 NM_014263 NM_014279 NM_014285 NM_014293 NM_014360 NM_014396 NM_014397 NM_014456 NM_014460 NM_014553 NM_014571 NM_014580 NM_014586 NM_014590 NM_014604 NM_014629 NM_014680 NM_014686 NM_014704 NM_014739 NM_014766 NM_014767 NM_014770 NM_014772 NM_014797 NM_014801 NM_014810 NM_014821 NM_014844 NM_014853 NM_014854 NM_014864 NM_014865 NM_014872 NM_014873 NM_014883 NM_014897 NM_014914 NM_014916 NM_014919 NM_014948 NM_014994 NM_015020 NM_015035 NM_015051 NM_015064 NM_015071 NM_015072 NM_015074 NM_015075 NM_015078 NM_015085 NM_015124 NM_015127 NM_015129 NM_015137 NM_015149 NM_015173 NM_015185 NM_015247 NM_015264 NM_015336 NM_015347 NM_015350 NM_015375 NM_015381 NM_015455 NM_015470 NM_015493 NM_015511 NM_015558 NM_015603 NM_015630 NM_015654 NM_015669 NM_015878 NM_015892 NM_015956 NM_015989 NM_015995 NM_016079 NM_016107 NM_016114 NM_016194 NM_016219 NM_016248 NM_016255 NM_016263 NM_016264 NM_016308 NM_016369 NM_016377 NM_016436 NM_016456 NM_016516 NM_016553 NM_016592 NM_016821 NM_016823 NM_016826 NM_016827 NM_016828 NM_016829 NM_017424 NM_017444 NM_017582 NM_017592 NM_017599 NM_017607 NM_017621 NM_017668 NM_017681 NM_017694 NM_017712 NM_017714 NM_017732 NM_017761 NM_017771 NM_017781 NM_017791 NM_017801 NM_017817 NM_017831 NM_017847 NM_017860 NM_017872 NM_017873 NM_017899 NM_017919 NM_017925 NM_017929 NM_017946 NM_017952 NM_017966 NM_017974 NM_017998 NM_018003 NM_018023 NM_018046 NM_018051 NM_018069 NM_018076 NM_018091 NM_018097 NM_018108 NM_018137 NM_018144 NM_018201 NM_018212 NM_018228 NM_018242 NM_018244 NM_018267 NM_018277 NM_018334 NM_018370 NM_018379 NM_018404 NM_018425 NM_018440 NM_018450 NM_018469 NM_018553 NM_018561 NM_018566 NM_018656 NM_018658 NM_018667 NM_018690 NM_018706 NM_018724 NM_018932 NM_018941 NM_018947 NM_019008 NM_019042 NM_019049 NM_019060 NM_019061 NM_019069 NM_019072 NM_019087 NM_019089 NM_019094 NM_019109 NM_019607 NM_019846 NM_019892 NM_020134 NM_020228 NM_020248 NM_020327 NM_020348 NM_020416 NM_020429 NM_020447 NM_020453 NM_020462 NM_020465 NM_020529 NM_020550 NM_020643 NM_020644 NM_020655 NM_020714 NM_020746 NM_020762 NM_020773 NM_020777 NM_020786 NM_020813 NM_020825 NM_020899 NM_020918 NM_020919 NM_020922 NM_020927 NM_020952 NM_020975 NM_020993 NM_020997 NM_021006 NM_021030 NM_021035 NM_021088 NM_021103 NM_021116 NM_021132 NM_021135 NM_021155 NM_021174 NM_021200 NM_021216 NM_021620 NM_021635 NM_021638 NM_021643 NM_021735 NM_021736 NM_021737 NM_021824 NM_021872 NM_021873 NM_021874 NM_021979 NM_021991 NM_022074 NM_022123 NM_022153 NM_022166 NM_022171 NM_022354 NM_022363 NM_022373 NM_022377 NM_022469 NM_022483 NM_022497 NM_022552 NM_022568 NM_022652 NM_022745 NM_022749 NM_022750 NM_022761 NM_022763 NM_022779 NM_022791 NM_022844 NM_022910 NM_022912 NM_023938 NM_023939 NM_023947 NM_024026 NM_024067 NM_024080 NM_024081 NM_024095 NM_024117 NM_024302 NM_024342 NM_024345 NM_024490 NM_024504 NM_024512 NM_024541 NM_024592 NM_024595 NM_024643 NM_024646 NM_024674 NM_024701 NM_024705 NM_024733 NM_024750 NM_024757 NM_024770 NM_024798 NM_024815 NM_024818 NM_024830 NM_024881 NM_024887 NM_024902 NM_024915 NM_024954 NM_024955 NM_024959 NM_024971 NM_024974 NM_024989 NM_025030 NM_025042 NM_025061 NM_025074 NM_025104 NM_025151 NM_025159 NM_025189 NM_025250 NM_025257 NM_030621 NM_030645 NM_030650 NM_030762 NM_030772 NM_030802 NM_030803 NM_030806 NM_030816 NM_031208 NM_031215 NM_031306 NM_031438 NM_031482 NM_031904 NM_031940 NM_032037 NM_032045 NM_032103 NM_032104 NM_032105 NM_032121 NM_032141 NM_032144 NM_032285 NM_032300 NM_032304 NM_032333 NM_032336 NM_032338 NM_032374 NM_032389 NM_032433 NM_032449 NM_032485 NM_032562 NM_032583 NM_032594 NM_032682 NM_032683 NM_032711 NM_032725 NM_032732 NM_032740 NM_032753 NM_032756 NM_032758 NM_032785 NM_032788 NM_032794 NM_032796 NM_032815 NM_032829 NM_032831 NM_032850 NM_032853 NM_032898 NM_032932 NM_032950 NM_032968 NM_032969 NM_032973 NM_032976 NM_032977 NM_032992 NM_033088 NM_033106 NM_033109 NM_033128 NM_033130 NM_033136 NM_033137 NM_033141 NM_033151 NM_033206 NM_033266 NM_033288 NM_033297 NM_033360 NM_033375 NM_033393 NM_033397 NM_033405 NM_033513 NM_033637 NM_052820 NM_052879 NM_052882 NM_052884 NM_052910 NM_052925 NM_052970 NM_053041 NM_054016 NM_057179 NM_058004 NM_058172 NM_058178 NM_058180 NM_058238 NM_078469 NM_078473 NM_078483 NM_080387 NM_080476 NM_080551 NM_080605 NM_080625 NM_080645 NM_080665 NM_080723 NM_080758 NM_080819 NM_080821 NM_080836 NM_080876 NM_080927 NM_130446 NM_130830 NM_130842 NM_130843 NM_130846 NM_130901 NM_133330 NM_133331 NM_133332 NM_133333 NM_133335 NM_133336 NM_133444 NM_133452 NM_133477 NM_133496 NM_133646 NM_134324 NM_134422 NM_134423 NM_134424 NM_138292 NM_138335 NM_138356 NM_138400 NM_138454 NM_138458 NM_138468 NM_138492 NM_138568 NM_138621 NM_138622 NM_138623 NM_138624 NM_138625 NM_138626 NM_138627 NM_138633 NM_138706 NM_138804 NM_138813 NM_138958 NM_138995 NM_139045 NM_139072 NM_139074 NM_139273 NM_139312 NM_144578 NM_144597 NM_144599 NM_144607 NM_144613 NM_144687 NM_144692 NM_144701 NM_144970 NM_144994 NM_145008 NM_145034 NM_145037 NM_145039 NM_145042 NM_145179 NM_145186 NM_145203 NM_145212 NM_145233 NM_145251 NM_145256 NM_145285 NM_145298 NM_145328 NM_145341 NM_145648 NM_145734 NM_145751 NM_145799 NM_145865 NM_146387 NM_146388 NM_147131 NM_147132 NM_147152 NM_148171 NM_148174 NM_148923 NM_148957 NM_148960 NM_152235 NM_152253 NM_152284 NM_152302 NM_152304 NM_152425 NM_152437 NM_152444 NM_152451 NM_152461 NM_152475 NM_152487 NM_152489 NM_152531 NM_152551 NM_152583 NM_152608 NM_152624 NM_152694 NM_152717 NM_152737 NM_152760 NM_152775 NM_152793 NM_152831 NM_152835 NM_152842 NM_152934 NM_153023 NM_153047 NM_153048 NM_153208 NM_153209 NM_153238 NM_153260 NM_153263 NM_153338 NM_153345 NM_153346 NM_153442 NM_153462 NM_153463 NM_153603 NM_153712 NM_153718 NM_153719 NM_153759 NM_153809 NM_156036 NM_170600 NM_170601 NM_170721 NM_170741 NM_170742 NM_170771 NM_170773 NM_172014 NM_172024 NM_172097 NM_172387 NM_172388 NM_172389 NM_173060 NM_173061 NM_173075 NM_173079 NM_173344 NM_173355 NM_173473 NM_173483 NM_173484 NM_173509 NM_173510 NM_173511 NM_173528 NM_173547 NM_173562 NM_173565 NM_173578 NM_173607 NM_173661 NM_173809 NM_173823 NM_173826 NM_173851 NM_174878 NM_174892 NM_174911 NM_174921 NM_174934 NM_175066 NM_175629 NM_175709 NM_175736 NM_175767 NM_175871 NM_175885 NM_175888 NM_175901 NM_175924 NM_175931 NM_176783 NM_176799 NM_177405 NM_177438 NM_177529 NM_177530 NM_177532 NM_177534 NM_177536 NM_177938 NM_177939 NM_177954 NM_177978 NM_177979 NM_177999 NM_178008 NM_178034 NM_178037 NM_178038 NM_178039 NM_178040 NM_178123 NM_178169 NM_178336 NM_178448 NM_178509 NM_178516 NM_178520 NM_178586 NM_178814 NM_178832 NM_178864 NM_180981 NM_180982 NM_181041 NM_181304 NM_181305 NM_181306 NM_181307 NM_181334 NM_181335 NM_181349 NM_181481 NM_181482 NM_181483 NM_181512 NM_181654 NM_181705 NM_181713 NM_181871 NM_181876 NM_181897 NM_182487 NM_182501 NM_182505 NM_182531 NM_182533 NM_182578 NM_182607 NM_182610 NM_182621 NM_182633 NM_182637 NM_182638 NM_182802 NM_182804 NM_182829 NM_182898 NM_182899 NM_182907 NM_182960 NM_183387 NM_183414 NM_184042 NM_194284 NM_194285 NM_194295 NM_194303 NM_194352 NM_194356 NM_194434 NM_194451 NM_197941 NM_197956 NM_198079 NM_198081 NM_198151 NM_198157 NM_198181 NM_198271 NM_198291 NM_198329 NM_198336 NM_198337 NM_198394 NM_198478 NM_198484 NM_198501 NM_198527 NM_198533 NM_198547 NM_198549 NM_198562 NM_198564 NM_198569 NM_198595 NM_198704 NM_198705 NM_198706 NM_198707 NM_198708 NM_198835 NM_198843 NM_198847 NM_198851 NM_198853 NM_198887 NM_198890 NM_198893 NM_198900 NM_198924 NM_198935 NM_198974 NM_199037 NM_199040 NM_199045 NM_199050 NM_199071 NM_199072 NM_199184 NM_199188 NM_199190 NM_199205 NM_199283 NM_199345 NM_199415 NM_199437 NM_199438 NM_199439 NM_199462 NM_199487 NM_199513 NM_201253 NM_201280 NM_201397 NM_201431 NM_201559 NM_201628 NM_203339 NM_203395 NM_203445 NM_203446 NM_203453 NM_203506 NM_205846 NM_205861 NM_206813 NM_206814 NM_206835 NM_206944 NM_206945 NM_206946 NM_206947 NM_207003 NM_207112 NM_207113 NM_207303 NM_207320 NM_207330 NM_207333 NM_207336 NM_207358 NM_207362 NM_207391 NM_207401 NM_207405 NM_207411 NM_207432 NM_207438 NM_207442 NM_207453 NM_207483 NM_207486 NM_207505 NM_207511 NM_212530 NM_213566 NM_213723 XM_032945 XM_037523 XM_039676 XM_046531 XM_047610 XM_048592 XM_051017 XM_051081 XM_055636 XM_059482 XM_087353 XM_171054 XM_208990 XM_209597 XM_209655 XM_210856 XM_211086 XM_290777 XM_291054 XM_293687 XM_294765 XM_351723 XM_353628 XM_370654 XM_370849 XM_370899 XM_371074 XM_371081 XM_371176 XM_371214 XM_371399 XM_371486 XM_371664 XM_371691 XM_371820 XM_372267 XM_372723 XM_373695 XM_373737 XM_373786 XM_373930 XM_374086 XM_374270 XM_374766 XM_374781 XM_374922 XM_375185 XM_375373 XM_375378 XM_375491 XM_375608 XM_375928 XM_376018 XM_376062 XM_376207 XM_376303 XM_376350 XM_376573 XM_376588 XM_376602 XM_376607 XM_376677 XM_376774 XM_376905 XM_377041 XM_378208 XM_378273 XM_378312 XM_378367 XM_378379 XM_378390 XM_378399 XM_378434 XM_378516 XM_378529 XM_378617 XM_378620 XM_378639 XM_378655 XM_378660 XM_378678 XM_378787 XM_378825 XM_378861 XM_378993 XM_379029 XM_379069 XM_379079 XM_379096 XM_379106 XM_379108 XM_379114 XM_379123 XM_379141 XM_379146 XM_379154 XM_379180 XM_379231 XM_379255 XM_379363 XM_379403 XM_379458 XM_379483 XM_379512 XM_379584 XM_379586 XM_379623 XM_379651 XM_379702 XM_379781 XM_379786 XM_379800 XM_379820 XM_379827 XM_379931 XM_380099 XM_380121 XM_380135 XM_495807 XM_495902 XM_496054 XM_496081 XM_496088 XM_496103 XM_496134 XM_496191 XM_496332 XM_496408 XM_496690 XM_496877 XM_496879 XM_496889 XM_496907 XM_497121 XM_498451 XM_498456 XM_498467 XM_498490 XM_498491 XM_498506 XM_498660 XM_498683 XM_498738 XM_498834 XM_498946 XM_498972 XM_499056 XM_499161 XM_499182 XM_499185 XM_499260 XM_499298 XM_499312 XM_499343 XM_499503 XM_499522 XM_499581 XM_499585 XM_499597 XR_000182 XR_000263	Genes with multiple seed matches: NM_000112 NM_000337 NM_000376 NM_000664 NM_000843 NM_001002814 NM_001002861 NM_001003674 NM_001003675 NM_001005387 NM_001013726 NM_001017405 NM_001017535 NM_001017980 NM_001024455 NM_001024808 NM_001050 NM_001375 NM_001859 NM_002253 NM_002481 NM_003236 NM_003679 NM_004338 NM_004549 NM_004729 NM_005044 NM_005417 NM_005615 NM_005687 NM_005882 NM_005986 NM_007338 NM_012346 NM_014396 NM_014586 NM_014686 NM_014801 NM_014844 NM_014872 NM_015074 NM_015892 NM_016553 NM_017952 NM_018091 NM_018370 NM_018706 NM_020993 NM_022761 NM_024342 NM_024512 NM_024646 NM_024881 NM_030802 NM_030806 NM_032105 NM_033141 NM_033266 NM_080551 NM_080821 NM_080836 NM_080876 NM_130446 NM_144599 NM_144613 NM_145203 NM_148960 NM_152235 NM_152253 NM_152793 NM_153463 NM_153718 NM_153719 NM_173060 NM_173823 NM_175901 NM_177532 NM_177978 NM_181041 NM_181481 NM_181482 NM_181483 NM_182578 NM_198291 NM_198835 NM_201397 NM_201431 NM_203446 NM_207320 NM_207411 NM_207438 NM_207486 XM_047610 XM_208990 XM_370849 XM_371176 XM_375185 XM_375491 XM_375608 XM_376018 XM_378678 XM_378825 XM_379512 XM_380135 XM_496134

For Details about the algorithm please see
"3' UTR seed matches, but not overall identity, are associated with RNAi off-targets" ,Nature Methods - 3, 199 - 204 (2006)

VIRsiRNAdb

Database of Viral siRNA / shRNA