VIRsiRNAdb

Predicted off-targets seeds for siRNA "cagguucggaugguucgag" Using siRNA Seed Locator Algorithm

siRNA Seed Locator
Total Genes with at least one seed match :1030.
Total Genes with multiple seed matches: 44.
Genes with at least one seed match: NM_000046 NM_000051 NM_000112 NM_000266 NM_000330 NM_000376 NM_000415 NM_000417 NM_000431 NM_000476 NM_000508 NM_000525 NM_000538 NM_000623 NM_000641 NM_000664 NM_000685 NM_000702 NM_000745 NM_000767 NM_000779 NM_000798 NM_000800 NM_000821 NM_000843 NM_000877 NM_000902 NM_000923 NM_000958 NM_000997 NM_001001323 NM_001001342 NM_001001433 NM_001001434 NM_001001665 NM_001001687 NM_001001695 NM_001001716 NM_001001851 NM_001001928 NM_001001929 NM_001001930 NM_001001974 NM_001002026 NM_001002034 NM_001002233 NM_001002799 NM_001002814 NM_001002920 NM_001003795 NM_001004299 NM_001004322 NM_001004326 NM_001004339 NM_001005291 NM_001005365 NM_001005387 NM_001006116 NM_001006617 NM_001006619 NM_001006620 NM_001006621 NM_001007033 NM_001007169 NM_001007278 NM_001007543 NM_001008224 NM_001008234 NM_001008392 NM_001008410 NM_001009913 NM_001011664 NM_001012393 NM_001012733 NM_001012734 NM_001013629 NM_001013633 NM_001013649 NM_001013664 NM_001013701 NM_001013706 NM_001013708 NM_001013726 NM_001014342 NM_001014373 NM_001014380 NM_001015886 NM_001017430 NM_001017431 NM_001017535 NM_001017923 NM_001017975 NM_001017980 NM_001018036 NM_001018051 NM_001024380 NM_001024381 NM_001024463 NM_001031 NM_001050 NM_001055 NM_001066 NM_001121 NM_001144 NM_001167 NM_001226 NM_001230 NM_001257 NM_001297 NM_001302 NM_001358 NM_001375 NM_001390 NM_001455 NM_001515 NM_001544 NM_001609 NM_001646 NM_001715 NM_001728 NM_001733 NM_001802 NM_001821 NM_001848 NM_001859 NM_001918 NM_001928 NM_001939 NM_002072 NM_002086 NM_002126 NM_002230 NM_002243 NM_002253 NM_002254 NM_002310 NM_002430 NM_002481 NM_002545 NM_002577 NM_002581 NM_002604 NM_002610 NM_002714 NM_002725 NM_002739 NM_002780 NM_002814 NM_002822 NM_002847 NM_002853 NM_002868 NM_002895 NM_002956 NM_002957 NM_002985 NM_003011 NM_003033 NM_003106 NM_003147 NM_003234 NM_003290 NM_003340 NM_003389 NM_003417 NM_003418 NM_003483 NM_003600 NM_003633 NM_003676 NM_003713 NM_003763 NM_003775 NM_003807 NM_003840 NM_003861 NM_003874 NM_003879 NM_003885 NM_003895 NM_003953 NM_004040 NM_004170 NM_004176 NM_004229 NM_004293 NM_004295 NM_004296 NM_004356 NM_004371 NM_004423 NM_004480 NM_004549 NM_004561 NM_004575 NM_004588 NM_004618 NM_004619 NM_004622 NM_004646 NM_004697 NM_004729 NM_004735 NM_004742 NM_004745 NM_004795 NM_004804 NM_004835 NM_004843 NM_004863 NM_004921 NM_005036 NM_005044 NM_005065 NM_005095 NM_005127 NM_005128 NM_005149 NM_005151 NM_005180 NM_005206 NM_005214 NM_005242 NM_005354 NM_005491 NM_005504 NM_005542 NM_005578 NM_005593 NM_005635 NM_005636 NM_005658 NM_005683 NM_005687 NM_005798 NM_005801 NM_005808 NM_005817 NM_005821 NM_005822 NM_005844 NM_005885 NM_005897 NM_006028 NM_006047 NM_006052 NM_006107 NM_006122 NM_006162 NM_006213 NM_006335 NM_006479 NM_006504 NM_006538 NM_006578 NM_006614 NM_006631 NM_006731 NM_006743 NM_006853 NM_006859 NM_006873 NM_006899 NM_006931 NM_006941 NM_006974 NM_006989 NM_006991 NM_007055 NM_007137 NM_007139 NM_007175 NM_007249 NM_007287 NM_007288 NM_007289 NM_007294 NM_007295 NM_007296 NM_007297 NM_007298 NM_007299 NM_007300 NM_007301 NM_007302 NM_007303 NM_007304 NM_007305 NM_007306 NM_007344 NM_009585 NM_012069 NM_012229 NM_012288 NM_012309 NM_012346 NM_012431 NM_012434 NM_012460 NM_013301 NM_013332 NM_013374 NM_013437 NM_014028 NM_014057 NM_014235 NM_014257 NM_014263 NM_014285 NM_014293 NM_014336 NM_014349 NM_014360 NM_014396 NM_014451 NM_014460 NM_014586 NM_014604 NM_014634 NM_014659 NM_014686 NM_014704 NM_014766 NM_014789 NM_014797 NM_014801 NM_014805 NM_014811 NM_014821 NM_014844 NM_014853 NM_014854 NM_014864 NM_014865 NM_014872 NM_014873 NM_014899 NM_014948 NM_014994 NM_015035 NM_015049 NM_015064 NM_015085 NM_015099 NM_015104 NM_015124 NM_015149 NM_015208 NM_015252 NM_015253 NM_015291 NM_015336 NM_015347 NM_015350 NM_015375 NM_015447 NM_015558 NM_015723 NM_015831 NM_015892 NM_015989 NM_016024 NM_016114 NM_016119 NM_016194 NM_016206 NM_016369 NM_016412 NM_016424 NM_016436 NM_016553 NM_016643 NM_016735 NM_016823 NM_016824 NM_017415 NM_017419 NM_017554 NM_017592 NM_017621 NM_017631 NM_017635 NM_017732 NM_017781 NM_017801 NM_017831 NM_017847 NM_017872 NM_017888 NM_017925 NM_017929 NM_017946 NM_017952 NM_017977 NM_018003 NM_018015 NM_018023 NM_018069 NM_018097 NM_018222 NM_018228 NM_018234 NM_018267 NM_018277 NM_018308 NM_018325 NM_018379 NM_018401 NM_018404 NM_018420 NM_018425 NM_018427 NM_018561 NM_018656 NM_018667 NM_018690 NM_018706 NM_018932 NM_018941 NM_018947 NM_019008 NM_019061 NM_019069 NM_019089 NM_019607 NM_019903 NM_020064 NM_020215 NM_020309 NM_020327 NM_020348 NM_020416 NM_020438 NM_020445 NM_020447 NM_020674 NM_020714 NM_020762 NM_020773 NM_020796 NM_020801 NM_020956 NM_020996 NM_020997 NM_021015 NM_021020 NM_021035 NM_021127 NM_021251 NM_021622 NM_021635 NM_021958 NM_021991 NM_022068 NM_022153 NM_022171 NM_022373 NM_022377 NM_022463 NM_022483 NM_022487 NM_022497 NM_022568 NM_022727 NM_022745 NM_022761 NM_022763 NM_022898 NM_023083 NM_023084 NM_023085 NM_023086 NM_023087 NM_023088 NM_023938 NM_023939 NM_024026 NM_024076 NM_024080 NM_024081 NM_024090 NM_024095 NM_024117 NM_024342 NM_024345 NM_024416 NM_024504 NM_024512 NM_024533 NM_024557 NM_024569 NM_024592 NM_024595 NM_024646 NM_024647 NM_024701 NM_024733 NM_024750 NM_024770 NM_024798 NM_024859 NM_024881 NM_024891 NM_024902 NM_024938 NM_024954 NM_024974 NM_024997 NM_025030 NM_025042 NM_025061 NM_025104 NM_025151 NM_025189 NM_025195 NM_025220 NM_025257 NM_030644 NM_030645 NM_030650 NM_030802 NM_030806 NM_030891 NM_030930 NM_031306 NM_031313 NM_031482 NM_031850 NM_031940 NM_032049 NM_032105 NM_032116 NM_032121 NM_032141 NM_032285 NM_032300 NM_032333 NM_032336 NM_032338 NM_032374 NM_032389 NM_032433 NM_032485 NM_032486 NM_032603 NM_032620 NM_032682 NM_032683 NM_032753 NM_032788 NM_032794 NM_032796 NM_032815 NM_032831 NM_032837 NM_032853 NM_032898 NM_032932 NM_032968 NM_032969 NM_032973 NM_032975 NM_032976 NM_032977 NM_032980 NM_032992 NM_033014 NM_033031 NM_033103 NM_033130 NM_033133 NM_033136 NM_033137 NM_033141 NM_033185 NM_033266 NM_033285 NM_033288 NM_033360 NM_033393 NM_033405 NM_033505 NM_033658 NM_033670 NM_033671 NM_052811 NM_052820 NM_052882 NM_052884 NM_052910 NM_053041 NM_054016 NM_054027 NM_058178 NM_058217 NM_058238 NM_078473 NM_080476 NM_080551 NM_080605 NM_080665 NM_080740 NM_080758 NM_080821 NM_080876 NM_080927 NM_130435 NM_130771 NM_130842 NM_130843 NM_133168 NM_133169 NM_133282 NM_133377 NM_133444 NM_133460 NM_133509 NM_133644 NM_133646 NM_134422 NM_134423 NM_134424 NM_138292 NM_138323 NM_138324 NM_138356 NM_138400 NM_138454 NM_138468 NM_138492 NM_138568 NM_138576 NM_138621 NM_138622 NM_138623 NM_138624 NM_138625 NM_138626 NM_138627 NM_138706 NM_138775 NM_138804 NM_138958 NM_138983 NM_138995 NM_139290 NM_139312 NM_144490 NM_144597 NM_144599 NM_144600 NM_144613 NM_144701 NM_144778 NM_144947 NM_144970 NM_145037 NM_145039 NM_145212 NM_145233 NM_145276 NM_145297 NM_145328 NM_145639 NM_145640 NM_145641 NM_145642 NM_145751 NM_145759 NM_145800 NM_145802 NM_145865 NM_147131 NM_147132 NM_147134 NM_148957 NM_148960 NM_152225 NM_152235 NM_152247 NM_152253 NM_152284 NM_152304 NM_152444 NM_152460 NM_152461 NM_152475 NM_152487 NM_152556 NM_152583 NM_152626 NM_152717 NM_152793 NM_152838 NM_152842 NM_152872 NM_152873 NM_152874 NM_152875 NM_152876 NM_152877 NM_153023 NM_153202 NM_153209 NM_153229 NM_153238 NM_153260 NM_153263 NM_153338 NM_153345 NM_153346 NM_153603 NM_153683 NM_153718 NM_153719 NM_153809 NM_153812 NM_156036 NM_170601 NM_170736 NM_170737 NM_170750 NM_170771 NM_170773 NM_172014 NM_172024 NM_172070 NM_172097 NM_172387 NM_172388 NM_172389 NM_173079 NM_173344 NM_173357 NM_173358 NM_173468 NM_173473 NM_173483 NM_173537 NM_173547 NM_173562 NM_173565 NM_173649 NM_173673 NM_173809 NM_173823 NM_174856 NM_174878 NM_174890 NM_174892 NM_174911 NM_174921 NM_174934 NM_174961 NM_174962 NM_175060 NM_175066 NM_175698 NM_175723 NM_175729 NM_175871 NM_175883 NM_175884 NM_175888 NM_175901 NM_175907 NM_175924 NM_177414 NM_177435 NM_177452 NM_177529 NM_177530 NM_177532 NM_177534 NM_177536 NM_177938 NM_177939 NM_178037 NM_178038 NM_178039 NM_178040 NM_178154 NM_178155 NM_178156 NM_178157 NM_178225 NM_178226 NM_178336 NM_178520 NM_178540 NM_178544 NM_178814 NM_180981 NM_180982 NM_181041 NM_181304 NM_181305 NM_181306 NM_181307 NM_181457 NM_181458 NM_181459 NM_181460 NM_181512 NM_181701 NM_181705 NM_181713 NM_181782 NM_181876 NM_181886 NM_181887 NM_181888 NM_181889 NM_181890 NM_181891 NM_181892 NM_181893 NM_182505 NM_182509 NM_182540 NM_182578 NM_182607 NM_182621 NM_182633 NM_182637 NM_182638 NM_182802 NM_182804 NM_182829 NM_182832 NM_182904 NM_182915 NM_182960 NM_182984 NM_183057 NM_183376 NM_184042 NM_194285 NM_194286 NM_194295 NM_194451 NM_198058 NM_198081 NM_198151 NM_198240 NM_198271 NM_198336 NM_198337 NM_198394 NM_198428 NM_198433 NM_198434 NM_198435 NM_198436 NM_198437 NM_198484 NM_198506 NM_198533 NM_198549 NM_198562 NM_198564 NM_198589 NM_198590 NM_198591 NM_198681 NM_198704 NM_198705 NM_198706 NM_198707 NM_198708 NM_198835 NM_198843 NM_198851 NM_198853 NM_198887 NM_198893 NM_198924 NM_198935 NM_198974 NM_199037 NM_199072 NM_199355 NM_199415 NM_199462 NM_201348 NM_201397 NM_201431 NM_201559 NM_201628 NM_203374 NM_203395 NM_203446 NM_203506 NM_205846 NM_206817 NM_206818 NM_206853 NM_206854 NM_206855 NM_207003 NM_207304 NM_207320 NM_207330 NM_207333 NM_207391 NM_207401 NM_207411 NM_207432 NM_207453 NM_207458 NM_207469 NM_207482 NM_207486 NM_207505 NM_207511 NM_213566 NM_213590 NM_213612 NM_213633 NM_213723 NM_214676 NM_214677 NM_214678 NM_214679 XM_037523 XM_046531 XM_047610 XM_051017 XM_087490 XM_173132 XM_208990 XM_211908 XM_290777 XM_291017 XM_291154 XM_294765 XM_351723 XM_353628 XM_370634 XM_370849 XM_371081 XM_371176 XM_371399 XM_371461 XM_371672 XM_371691 XM_371760 XM_371783 XM_371801 XM_371820 XM_371904 XM_373695 XM_373786 XM_373844 XM_373906 XM_374086 XM_374162 XM_374781 XM_375500 XM_375568 XM_375697 XM_375928 XM_376018 XM_376207 XM_376303 XM_376602 XM_376607 XM_376774 XM_376905 XM_377041 XM_378273 XM_378312 XM_378379 XM_378516 XM_378529 XM_378639 XM_378643 XM_378655 XM_378660 XM_378678 XM_378787 XM_378825 XM_378946 XM_378993 XM_379029 XM_379030 XM_379079 XM_379114 XM_379154 XM_379231 XM_379254 XM_379255 XM_379363 XM_379512 XM_379584 XM_379586 XM_379623 XM_379780 XM_379820 XM_379827 XM_380135 XM_495867 XM_495902 XM_496134 XM_496690 XM_498449 XM_498506 XM_498545 XM_498559 XM_498563 XM_498569 XM_498572 XM_498614 XM_498683 XM_498738 XM_498834 XM_498902 XM_498917 XM_499045 XM_499161 XM_499185 XM_499290 XM_499579 XR_000182 XR_000184 XR_000216 XR_000261 XR_000263 XR_000292 XR_000294	Genes with multiple seed matches: NM_001001928 NM_001001929 NM_001001930 NM_001002814 NM_001007278 NM_001013726 NM_001358 NM_001859 NM_002581 NM_005036 NM_005044 NM_005687 NM_005798 NM_006614 NM_014586 NM_014864 NM_015149 NM_015892 NM_018706 NM_020348 NM_020956 NM_024512 NM_024646 NM_033141 NM_033266 NM_052811 NM_152253 NM_153346 NM_173823 NM_175901 NM_181457 NM_181458 NM_181460 NM_198887 NM_207411 NM_207458 NM_213590 XM_047610 XM_051017 XM_370849 XM_371176 XM_378678 XM_378825 XM_379255

For Details about the algorithm please see
"3' UTR seed matches, but not overall identity, are associated with RNAi off-targets" ,Nature Methods - 3, 199 - 204 (2006)

VIRsiRNAdb

Database of Viral siRNA / shRNA