VIRsiRNAdb

Predicted off-targets seeds for siRNA "aacugacaauucugucguccu" Using siRNA Seed Locator Algorithm

siRNA Seed Locator
Total Genes with at least one seed match :1085.
Total Genes with multiple seed matches: 85.
Genes with at least one seed match: NM_000175 NM_000254 NM_000268 NM_000278 NM_000332 NM_000336 NM_000343 NM_000376 NM_000385 NM_000389 NM_000391 NM_000398 NM_000430 NM_000486 NM_000545 NM_000633 NM_000635 NM_000663 NM_000672 NM_000686 NM_000775 NM_000787 NM_000832 NM_000841 NM_000898 NM_000901 NM_000920 NM_000949 NM_000980 NM_001001188 NM_001001344 NM_001001563 NM_001001677 NM_001001693 NM_001001895 NM_001001927 NM_001001928 NM_001001929 NM_001001930 NM_001002231 NM_001002232 NM_001002847 NM_001002862 NM_001003399 NM_001003406 NM_001003692 NM_001003807 NM_001004056 NM_001004057 NM_001004197 NM_001004301 NM_001004321 NM_001004325 NM_001004342 NM_001004426 NM_001004707 NM_001005387 NM_001005502 NM_001005505 NM_001005920 NM_001006616 NM_001006641 NM_001006642 NM_001006643 NM_001007466 NM_001007540 NM_001008223 NM_001008224 NM_001008404 NM_001008736 NM_001008737 NM_001008739 NM_001009820 NM_001009880 NM_001009957 NM_001010897 NM_001010911 NM_001010925 NM_001010926 NM_001012267 NM_001012270 NM_001012271 NM_001012320 NM_001012426 NM_001012427 NM_001012614 NM_001012644 NM_001012651 NM_001013615 NM_001013678 NM_001013683 NM_001013685 NM_001013691 NM_001013725 NM_001013727 NM_001015053 NM_001017423 NM_001017430 NM_001017431 NM_001017535 NM_001017990 NM_001017995 NM_001018057 NM_001018065 NM_001018066 NM_001018111 NM_001018116 NM_001024226 NM_001024227 NM_001024228 NM_001024457 NM_001024598 NM_001024733 NM_001025076 NM_001025077 NM_001025160 NM_001025205 NM_001065 NM_001092 NM_001168 NM_001203 NM_001206 NM_001256 NM_001280 NM_001294 NM_001328 NM_001346 NM_001408 NM_001433 NM_001441 NM_001483 NM_001518 NM_001519 NM_001552 NM_001554 NM_001620 NM_001628 NM_001632 NM_001634 NM_001658 NM_001774 NM_001776 NM_001784 NM_001874 NM_001896 NM_001945 NM_001956 NM_001964 NM_001978 NM_001979 NM_001983 NM_001993 NM_002111 NM_002182 NM_002183 NM_002293 NM_002309 NM_002319 NM_002353 NM_002357 NM_002359 NM_002473 NM_002501 NM_002515 NM_002540 NM_002541 NM_002579 NM_002602 NM_002608 NM_002676 NM_002705 NM_002737 NM_002776 NM_002833 NM_002840 NM_002850 NM_002860 NM_002885 NM_002891 NM_002938 NM_002957 NM_002959 NM_003004 NM_003030 NM_003045 NM_003048 NM_003089 NM_003131 NM_003155 NM_003162 NM_003181 NM_003216 NM_003288 NM_003307 NM_003320 NM_003355 NM_003412 NM_003450 NM_003455 NM_003458 NM_003486 NM_003490 NM_003505 NM_003560 NM_003562 NM_003580 NM_003633 NM_003644 NM_003660 NM_003677 NM_003748 NM_003778 NM_003809 NM_003841 NM_003846 NM_003856 NM_003862 NM_003901 NM_003926 NM_003953 NM_003987 NM_003988 NM_003989 NM_003990 NM_004036 NM_004059 NM_004068 NM_004077 NM_004093 NM_004096 NM_004115 NM_004171 NM_004174 NM_004200 NM_004204 NM_004265 NM_004269 NM_004273 NM_004315 NM_004339 NM_004377 NM_004409 NM_004433 NM_004463 NM_004473 NM_004565 NM_004573 NM_004575 NM_004712 NM_004737 NM_004784 NM_004811 NM_004838 NM_004914 NM_004921 NM_004930 NM_004937 NM_004978 NM_004995 NM_005036 NM_005055 NM_005169 NM_005170 NM_005180 NM_005185 NM_005186 NM_005197 NM_005307 NM_005376 NM_005397 NM_005400 NM_005474 NM_005490 NM_005542 NM_005551 NM_005597 NM_005634 NM_005650 NM_005656 NM_005658 NM_005785 NM_005806 NM_005828 NM_005861 NM_005867 NM_005883 NM_005902 NM_005904 NM_005938 NM_005957 NM_005969 NM_005971 NM_006011 NM_006030 NM_006060 NM_006067 NM_006076 NM_006086 NM_006091 NM_006133 NM_006224 NM_006315 NM_006352 NM_006361 NM_006373 NM_006459 NM_006489 NM_006504 NM_006553 NM_006560 NM_006561 NM_006615 NM_006618 NM_006651 NM_006738 NM_006743 NM_006775 NM_006783 NM_006864 NM_006868 NM_006884 NM_006895 NM_006897 NM_006901 NM_007014 NM_007030 NM_007073 NM_007177 NM_007189 NM_007200 NM_007249 NM_007321 NM_007326 NM_007327 NM_007353 NM_007359 NM_012068 NM_012072 NM_012090 NM_012101 NM_012111 NM_012140 NM_012151 NM_012156 NM_012171 NM_012256 NM_012271 NM_012301 NM_012306 NM_012308 NM_012324 NM_012397 NM_012398 NM_012429 NM_012445 NM_012465 NM_013253 NM_013255 NM_013366 NM_013385 NM_013412 NM_013434 NM_013440 NM_013443 NM_013449 NM_014001 NM_014048 NM_014077 NM_014079 NM_014231 NM_014235 NM_014286 NM_014384 NM_014388 NM_014390 NM_014403 NM_014405 NM_014434 NM_014468 NM_014556 NM_014577 NM_014578 NM_014591 NM_014612 NM_014631 NM_014634 NM_014646 NM_014655 NM_014672 NM_014678 NM_014717 NM_014730 NM_014759 NM_014760 NM_014772 NM_014776 NM_014783 NM_014792 NM_014801 NM_014837 NM_014910 NM_014940 NM_014959 NM_014974 NM_015011 NM_015033 NM_015039 NM_015053 NM_015063 NM_015077 NM_015080 NM_015085 NM_015094 NM_015099 NM_015107 NM_015124 NM_015125 NM_015150 NM_015161 NM_015166 NM_015173 NM_015205 NM_015206 NM_015226 NM_015233 NM_015246 NM_015264 NM_015266 NM_015271 NM_015272 NM_015277 NM_015288 NM_015315 NM_015318 NM_015347 NM_015374 NM_015417 NM_015557 NM_015568 NM_015609 NM_015658 NM_015691 NM_015881 NM_015898 NM_015932 NM_015996 NM_016015 NM_016068 NM_016076 NM_016100 NM_016118 NM_016332 NM_016373 NM_016407 NM_016418 NM_016431 NM_016452 NM_016457 NM_016479 NM_016532 NM_016542 NM_016548 NM_016586 NM_016735 NM_017450 NM_017550 NM_017551 NM_017590 NM_017666 NM_017668 NM_017679 NM_017706 NM_017731 NM_017798 NM_017804 NM_017858 NM_017873 NM_017915 NM_017921 NM_017931 NM_017974 NM_017977 NM_017980 NM_017991 NM_018003 NM_018025 NM_018028 NM_018059 NM_018099 NM_018182 NM_018201 NM_018205 NM_018209 NM_018239 NM_018316 NM_018337 NM_018440 NM_018443 NM_018452 NM_018479 NM_018639 NM_018667 NM_018704 NM_018708 NM_018717 NM_018836 NM_018942 NM_018957 NM_018961 NM_018974 NM_019020 NM_019070 NM_019096 NM_019103 NM_019106 NM_019624 NM_019625 NM_020119 NM_020126 NM_020167 NM_020182 NM_020210 NM_020215 NM_020245 NM_020309 NM_020335 NM_020438 NM_020546 NM_020674 NM_020686 NM_020697 NM_020713 NM_020768 NM_020776 NM_020777 NM_020782 NM_020817 NM_020836 NM_020850 NM_020853 NM_020898 NM_020918 NM_021019 NM_021096 NM_021106 NM_021131 NM_021155 NM_021164 NM_021168 NM_021218 NM_021260 NM_021269 NM_021569 NM_021612 NM_021633 NM_021649 NM_021910 NM_021949 NM_021962 NM_021978 NM_022059 NM_022081 NM_022114 NM_022128 NM_022172 NM_022338 NM_022460 NM_022759 NM_022791 NM_022822 NM_022833 NM_022897 NM_022898 NM_023002 NM_023007 NM_023008 NM_023009 NM_023036 NM_023067 NM_023938 NM_024034 NM_024035 NM_024039 NM_024076 NM_024087 NM_024120 NM_024296 NM_024513 NM_024544 NM_024554 NM_024561 NM_024569 NM_024676 NM_024701 NM_024704 NM_024766 NM_024832 NM_024847 NM_024919 NM_024935 NM_025002 NM_025054 NM_025179 NM_025225 NM_025230 NM_025251 NM_025265 NM_030581 NM_030622 NM_030626 NM_030783 NM_030803 NM_030813 NM_030899 NM_030928 NM_030943 NM_031265 NM_031283 NM_031429 NM_031437 NM_031460 NM_031466 NM_031949 NM_031952 NM_032028 NM_032109 NM_032153 NM_032181 NM_032189 NM_032294 NM_032295 NM_032329 NM_032348 NM_032375 NM_032430 NM_032492 NM_032509 NM_032603 NM_032644 NM_032645 NM_032711 NM_032818 NM_032826 NM_032836 NM_032875 NM_032932 NM_032951 NM_032952 NM_032953 NM_032954 NM_032994 NM_032999 NM_033000 NM_033001 NM_033016 NM_033044 NM_033130 NM_033131 NM_033223 NM_033224 NM_033246 NM_033315 NM_033331 NM_033401 NM_033513 NM_033514 NM_033551 NM_033631 NM_033649 NM_052839 NM_052861 NM_052876 NM_052884 NM_052890 NM_052892 NM_052901 NM_052906 NM_052933 NM_053002 NM_053279 NM_053286 NM_054030 NM_057169 NM_057170 NM_078467 NM_078481 NM_079424 NM_079425 NM_080611 NM_080612 NM_080668 NM_080720 NM_080821 NM_080836 NM_130435 NM_130440 NM_130465 NM_130766 NM_130788 NM_130790 NM_130792 NM_130795 NM_130809 NM_130853 NM_130854 NM_130855 NM_133279 NM_133371 NM_133443 NM_133451 NM_133463 NM_133490 NM_133632 NM_133633 NM_133642 NM_134427 NM_134433 NM_138400 NM_138452 NM_138457 NM_138576 NM_138614 NM_138619 NM_138732 NM_138734 NM_138774 NM_138781 NM_138783 NM_138795 NM_138813 NM_138959 NM_138992 NM_139124 NM_139202 NM_144488 NM_144489 NM_144586 NM_144599 NM_144600 NM_144606 NM_144664 NM_144669 NM_144767 NM_144966 NM_144997 NM_145045 NM_145117 NM_145166 NM_145230 NM_145255 NM_145685 NM_145719 NM_145733 NM_145734 NM_145798 NM_145888 NM_145909 NM_147147 NM_148175 NM_148176 NM_148887 NM_148920 NM_152235 NM_152237 NM_152245 NM_152247 NM_152253 NM_152307 NM_152363 NM_152372 NM_152422 NM_152449 NM_152470 NM_152473 NM_152509 NM_152554 NM_152581 NM_152719 NM_152735 NM_152840 NM_152841 NM_152842 NM_152990 NM_153012 NM_153238 NM_153239 NM_153334 NM_153335 NM_153343 NM_153362 NM_153456 NM_153609 NM_153685 NM_153717 NM_153815 NM_170664 NM_170706 NM_170739 NM_172000 NM_172206 NM_172207 NM_172208 NM_172239 NM_172248 NM_172367 NM_173156 NM_173191 NM_173192 NM_173193 NM_173194 NM_173195 NM_173342 NM_173459 NM_173463 NM_173477 NM_173528 NM_173529 NM_173541 NM_173551 NM_173578 NM_173590 NM_173627 NM_173637 NM_173681 NM_173795 NM_173802 NM_173807 NM_174918 NM_175039 NM_175040 NM_175047 NM_175609 NM_175898 NM_175900 NM_175929 NM_176799 NM_177435 NM_177550 NM_177924 NM_177925 NM_177937 NM_177972 NM_177991 NM_177995 NM_177996 NM_177999 NM_178000 NM_178001 NM_178002 NM_178003 NM_178129 NM_178159 NM_178238 NM_178441 NM_178831 NM_178839 NM_178863 NM_181336 NM_181357 NM_181492 NM_181527 NM_181528 NM_181784 NM_181826 NM_181827 NM_181828 NM_181829 NM_181830 NM_181832 NM_181833 NM_181834 NM_181835 NM_182511 NM_182534 NM_182538 NM_182546 NM_182557 NM_182570 NM_182665 NM_182740 NM_182812 NM_182895 NM_182964 NM_182982 NM_183040 NM_183238 NM_194071 NM_194286 NM_194290 NM_194303 NM_194316 NM_194358 NM_194359 NM_198078 NM_198098 NM_198285 NM_198320 NM_198324 NM_198336 NM_198337 NM_198403 NM_198440 NM_198458 NM_198476 NM_198481 NM_198484 NM_198526 NM_198563 NM_198576 NM_198582 NM_198700 NM_198851 NM_198890 NM_198925 NM_199045 NM_199052 NM_199131 NM_199141 NM_199169 NM_199170 NM_199171 NM_199245 NM_199334 NM_199359 NM_199360 NM_199361 NM_199362 NM_199363 NM_199424 NM_199454 NM_199461 NM_201432 NM_201433 NM_201520 NM_201568 NM_201569 NM_203304 NM_203375 NM_203395 NM_203426 NM_203444 NM_203445 NM_205768 NM_205843 NM_207113 NM_207119 NM_207313 NM_207323 NM_207391 NM_207395 NM_207462 NM_207463 NM_207469 NM_207472 NM_207484 NM_207495 NM_207502 NM_207577 NM_207582 NM_212543 NM_213598 NM_213609 NM_213631 NM_213632 XM_032901 XM_032996 XM_035299 XM_035497 XM_037557 XM_038436 XM_042978 XM_043493 XM_043653 XM_047610 XM_049237 XM_058931 XM_059689 XM_084852 XM_097792 XM_166132 XM_209097 XM_209187 XM_209569 XM_211816 XM_290502 XM_290597 XM_290854 XM_290925 XM_291128 XM_293918 XM_295213 XM_297816 XM_370603 XM_370758 XM_370932 XM_371082 XM_371184 XM_371254 XM_371664 XM_371891 XM_372556 XM_372774 XM_373474 XM_373627 XM_373704 XM_374141 XM_374422 XM_375041 XM_375456 XM_375558 XM_375670 XM_376018 XM_376284 XM_376679 XM_376720 XM_376784 XM_378178 XM_378390 XM_378511 XM_378544 XM_378642 XM_378706 XM_378708 XM_378741 XM_378756 XM_378766 XM_378799 XM_378908 XM_378947 XM_379235 XM_379295 XM_379391 XM_379406 XM_379452 XM_379535 XM_379584 XM_379664 XM_379665 XM_379716 XM_379920 XM_379933 XM_379967 XM_380160 XM_496036 XM_496349 XM_496351 XM_496371 XM_496408 XM_496449 XM_496766 XM_496849 XM_496877 XM_496889 XM_496907 XM_496981 XM_496982 XM_496983 XM_496984 XM_496985 XM_497019 XM_497036 XM_498469 XM_498497 XM_498508 XM_498540 XM_498545 XM_498639 XM_498649 XM_498835 XM_498857 XM_498861 XM_498986 XM_499043 XM_499046 XM_499050 XM_499068 XM_499142 XM_499170 XM_499257 XM_499312 XM_499343 XM_499519 XR_000190 XR_000192 XR_000194	Genes with multiple seed matches: NM_000278 NM_001004321 NM_001005920 NM_001010925 NM_001013685 NM_001017995 NM_001025076 NM_001025077 NM_001519 NM_002309 NM_002501 NM_002705 NM_002938 NM_002957 NM_003155 NM_003987 NM_003988 NM_005957 NM_005969 NM_006091 NM_006133 NM_006561 NM_007321 NM_012156 NM_014231 NM_014286 NM_014591 NM_014634 NM_014772 NM_015053 NM_015063 NM_015077 NM_015205 NM_015246 NM_015691 NM_016332 NM_017921 NM_021106 NM_021131 NM_021155 NM_022898 NM_024676 NM_031265 NM_031283 NM_032109 NM_032189 NM_032818 NM_033224 NM_130795 NM_134427 NM_138576 NM_144488 NM_144489 NM_145685 NM_152470 NM_173191 NM_173192 NM_173193 NM_173194 NM_173195 NM_173342 NM_177996 NM_178000 NM_178001 NM_178002 NM_178003 NM_199245 NM_207577 XM_084852 XM_295213 XM_373704 XM_375558 XM_378708 XM_379664 XM_379665 XM_379920 XM_496877 XM_496907 XM_498497 XM_498508 XM_498639 XM_498649 XM_498835 XM_499046 XM_499343

For Details about the algorithm please see
"3' UTR seed matches, but not overall identity, are associated with RNAi off-targets" ,Nature Methods - 3, 199 - 204 (2006)

VIRsiRNAdb

Database of Viral siRNA / shRNA