VIRsiRNAdb

Predicted off-targets seeds for siRNA "guacauuccgcucgucggcg" Using siRNA Seed Locator Algorithm

siRNA Seed Locator
Total Genes with at least one seed match :911.
Total Genes with multiple seed matches: 69.
Genes with at least one seed match: NM_000037 NM_000071 NM_000097 NM_000114 NM_000149 NM_000156 NM_000160 NM_000199 NM_000240 NM_000264 NM_000361 NM_000383 NM_000445 NM_000451 NM_000541 NM_000542 NM_000670 NM_000718 NM_000744 NM_000757 NM_000789 NM_000800 NM_000815 NM_000832 NM_000977 NM_001001188 NM_001001418 NM_001001438 NM_001001549 NM_001001550 NM_001001555 NM_001001661 NM_001001675 NM_001001694 NM_001001700 NM_001002860 NM_001003399 NM_001003665 NM_001003681 NM_001003715 NM_001003716 NM_001003941 NM_001004321 NM_001005388 NM_001005753 NM_001005910 NM_001005911 NM_001005912 NM_001005913 NM_001006932 NM_001006946 NM_001007250 NM_001007271 NM_001007277 NM_001008410 NM_001008745 NM_001008896 NM_001009553 NM_001009610 NM_001009883 NM_001009913 NM_001010866 NM_001010867 NM_001010871 NM_001010891 NM_001010903 NM_001010910 NM_001012270 NM_001012271 NM_001012714 NM_001012958 NM_001012960 NM_001013633 NM_001013673 NM_001013685 NM_001013701 NM_001013712 NM_001013721 NM_001013726 NM_001013836 NM_001013837 NM_001013839 NM_001015048 NM_001015049 NM_001015053 NM_001017440 NM_001017528 NM_001017529 NM_001017530 NM_001017924 NM_001017995 NM_001018050 NM_001018051 NM_001018052 NM_001018115 NM_001018116 NM_001020818 NM_001020819 NM_001020820 NM_001020821 NM_001024401 NM_001024654 NM_001025081 NM_001025090 NM_001025092 NM_001025094 NM_001025098 NM_001025101 NM_001168 NM_001243 NM_001374 NM_001395 NM_001419 NM_001421 NM_001427 NM_001430 NM_001451 NM_001455 NM_001481 NM_001668 NM_001774 NM_001791 NM_001991 NM_002064 NM_002079 NM_002080 NM_002105 NM_002134 NM_002189 NM_002340 NM_002353 NM_002360 NM_002385 NM_002387 NM_002414 NM_002481 NM_002522 NM_002531 NM_002570 NM_002582 NM_002613 NM_002725 NM_002756 NM_002776 NM_002829 NM_002834 NM_002842 NM_002898 NM_002929 NM_002957 NM_002978 NM_002997 NM_003012 NM_003161 NM_003190 NM_003251 NM_003310 NM_003486 NM_003550 NM_003605 NM_003626 NM_003627 NM_003660 NM_003671 NM_003714 NM_003769 NM_003778 NM_003804 NM_003841 NM_003918 NM_003924 NM_003939 NM_003969 NM_004200 NM_004220 NM_004227 NM_004240 NM_004269 NM_004321 NM_004364 NM_004382 NM_004429 NM_004431 NM_004505 NM_004535 NM_004567 NM_004588 NM_004593 NM_004598 NM_004649 NM_004711 NM_004732 NM_004762 NM_004776 NM_004778 NM_004793 NM_004821 NM_004838 NM_004873 NM_004907 NM_004992 NM_005002 NM_005050 NM_005052 NM_005093 NM_005157 NM_005173 NM_005184 NM_005186 NM_005231 NM_005234 NM_005311 NM_005333 NM_005392 NM_005417 NM_005430 NM_005446 NM_005458 NM_005474 NM_005487 NM_005490 NM_005494 NM_005517 NM_005526 NM_005578 NM_005581 NM_005583 NM_005647 NM_005676 NM_005678 NM_005730 NM_005740 NM_005813 NM_005873 NM_005889 NM_005892 NM_005920 NM_005928 NM_005957 NM_006026 NM_006035 NM_006038 NM_006045 NM_006067 NM_006092 NM_006116 NM_006230 NM_006235 NM_006291 NM_006315 NM_006393 NM_006464 NM_006541 NM_006546 NM_006553 NM_006626 NM_006736 NM_006742 NM_006796 NM_006825 NM_006829 NM_006843 NM_006941 NM_006997 NM_006999 NM_007046 NM_007167 NM_007172 NM_007186 NM_007271 NM_007313 NM_007321 NM_007327 NM_007346 NM_007354 NM_009588 NM_012072 NM_012074 NM_012102 NM_012215 NM_012218 NM_012232 NM_012257 NM_012264 NM_012324 NM_012326 NM_012384 NM_012398 NM_012405 NM_012429 NM_013325 NM_013373 NM_013389 NM_014023 NM_014250 NM_014271 NM_014286 NM_014325 NM_014351 NM_014442 NM_014590 NM_014601 NM_014630 NM_014631 NM_014634 NM_014661 NM_014665 NM_014667 NM_014669 NM_014678 NM_014698 NM_014701 NM_014723 NM_014736 NM_014757 NM_014760 NM_014765 NM_014767 NM_014829 NM_014848 NM_014851 NM_014867 NM_014870 NM_014900 NM_014901 NM_014902 NM_014972 NM_015001 NM_015011 NM_015022 NM_015059 NM_015076 NM_015090 NM_015094 NM_015099 NM_015127 NM_015144 NM_015147 NM_015192 NM_015193 NM_015194 NM_015219 NM_015229 NM_015233 NM_015246 NM_015254 NM_015259 NM_015266 NM_015308 NM_015318 NM_015320 NM_015329 NM_015366 NM_015381 NM_015388 NM_015570 NM_015577 NM_015833 NM_015834 NM_015937 NM_015986 NM_016046 NM_016079 NM_016118 NM_016169 NM_016272 NM_016332 NM_016354 NM_016431 NM_016607 NM_016647 NM_016929 NM_016946 NM_016953 NM_017456 NM_017519 NM_017575 NM_017592 NM_017660 NM_017701 NM_017708 NM_017732 NM_017778 NM_017781 NM_017789 NM_017829 NM_017873 NM_017883 NM_017891 NM_017966 NM_018023 NM_018110 NM_018121 NM_018234 NM_018235 NM_018270 NM_018303 NM_018380 NM_018390 NM_018607 NM_018679 NM_018702 NM_018941 NM_018942 NM_018953 NM_018957 NM_018959 NM_019034 NM_019098 NM_019594 NM_020038 NM_020062 NM_020064 NM_020126 NM_020323 NM_020324 NM_020325 NM_020326 NM_020385 NM_020437 NM_020452 NM_020475 NM_020476 NM_020477 NM_020528 NM_020650 NM_020708 NM_020724 NM_020728 NM_020732 NM_020751 NM_020761 NM_020764 NM_020782 NM_020783 NM_020807 NM_020844 NM_020933 NM_021116 NM_021132 NM_021135 NM_021137 NM_021138 NM_021144 NM_021158 NM_021189 NM_021205 NM_021215 NM_021267 NM_021569 NM_021570 NM_021812 NM_021945 NM_022063 NM_022081 NM_022123 NM_022337 NM_022372 NM_022452 NM_022459 NM_022463 NM_023067 NM_023088 NM_023937 NM_024007 NM_024017 NM_024050 NM_024511 NM_024517 NM_024612 NM_024641 NM_024698 NM_024701 NM_024706 NM_024818 NM_024836 NM_024845 NM_024889 NM_024915 NM_024922 NM_024974 NM_025082 NM_025132 NM_025203 NM_025204 NM_025218 NM_025230 NM_030581 NM_030621 NM_030629 NM_030651 NM_030655 NM_030806 NM_030913 NM_030941 NM_031268 NM_031281 NM_031309 NM_031443 NM_031467 NM_031468 NM_031908 NM_031912 NM_031954 NM_032042 NM_032051 NM_032052 NM_032105 NM_032129 NM_032179 NM_032296 NM_032311 NM_032329 NM_032354 NM_032385 NM_032432 NM_032510 NM_032525 NM_032529 NM_032683 NM_032732 NM_032789 NM_032792 NM_032853 NM_032878 NM_032957 NM_032958 NM_032959 NM_032995 NM_033025 NM_033070 NM_033111 NM_033118 NM_033136 NM_033137 NM_033153 NM_033251 NM_033274 NM_033296 NM_033331 NM_033387 NM_033389 NM_033637 NM_033661 NM_033666 NM_052818 NM_052838 NM_052898 NM_052949 NM_052988 NM_053006 NM_053286 NM_057179 NM_079834 NM_080607 NM_080625 NM_130459 NM_133334 NM_133460 NM_134268 NM_138284 NM_138319 NM_138338 NM_138372 NM_138373 NM_138415 NM_138471 NM_138477 NM_138479 NM_138499 NM_138565 NM_138567 NM_138793 NM_138983 NM_139016 NM_139124 NM_139179 NM_139275 NM_144501 NM_144502 NM_144503 NM_144504 NM_144621 NM_144692 NM_144719 NM_144736 NM_144997 NM_145003 NM_145008 NM_145039 NM_145065 NM_145068 NM_145109 NM_145110 NM_145349 NM_145350 NM_145351 NM_145654 NM_145796 NM_145888 NM_147131 NM_147132 NM_147148 NM_152253 NM_152274 NM_152361 NM_152461 NM_152463 NM_152511 NM_152547 NM_152643 NM_152657 NM_152686 NM_152689 NM_152701 NM_152721 NM_152737 NM_152783 NM_152793 NM_152830 NM_152840 NM_152841 NM_152842 NM_152856 NM_152934 NM_152939 NM_152942 NM_152994 NM_153026 NM_153029 NM_153254 NM_153350 NM_153462 NM_153463 NM_153645 NM_153684 NM_170705 NM_170711 NM_172172 NM_172200 NM_172211 NM_173079 NM_173359 NM_173463 NM_173478 NM_173507 NM_173511 NM_173547 NM_173583 NM_173590 NM_173617 NM_173680 NM_173793 NM_173795 NM_173804 NM_173849 NM_174934 NM_174953 NM_174954 NM_174955 NM_174956 NM_174957 NM_175575 NM_175863 NM_175864 NM_175898 NM_176095 NM_176874 NM_177438 NM_177938 NM_177939 NM_177947 NM_177948 NM_177999 NM_178136 NM_178140 NM_178172 NM_178326 NM_178426 NM_178427 NM_178562 NM_178568 NM_178579 NM_178830 NM_178835 NM_178842 NM_181291 NM_181314 NM_181333 NM_181357 NM_181571 NM_181655 NM_181656 NM_181671 NM_181701 NM_181722 NM_181782 NM_181785 NM_182477 NM_182510 NM_182526 NM_182556 NM_182584 NM_182612 NM_182686 NM_182717 NM_182718 NM_182719 NM_182720 NM_182721 NM_182722 NM_182723 NM_182724 NM_182725 NM_182734 NM_182769 NM_182770 NM_182771 NM_182772 NM_182850 NM_182853 NM_182915 NM_182933 NM_182980 NM_183006 NM_183011 NM_183012 NM_183013 NM_183060 NM_183065 NM_194278 NM_194295 NM_194460 NM_198066 NM_198155 NM_198284 NM_198291 NM_198329 NM_198390 NM_198445 NM_198681 NM_198851 NM_198867 NM_199050 NM_199131 NM_199367 NM_199423 NM_199461 NM_201348 NM_201378 NM_201379 NM_201380 NM_201381 NM_201382 NM_201383 NM_201384 NM_201397 NM_201399 NM_201520 NM_201559 NM_201628 NM_203400 NM_203423 NM_203452 NM_206860 NM_206861 NM_206862 NM_207032 NM_207033 NM_207034 NM_207117 NM_207308 NM_207335 NM_207378 NM_207385 NM_207401 NM_207419 NM_207426 NM_207432 NM_207442 NM_207458 NM_207462 NM_207470 NM_207483 NM_207500 NM_207514 NM_207644 NM_207645 NM_212543 NM_213568 XM_017374 XM_028810 XM_032901 XM_032945 XM_043493 XM_053966 XM_059689 XM_086360 XM_088459 XM_117117 XM_168578 XM_290809 XM_290925 XM_291064 XM_294450 XM_294910 XM_295213 XM_370607 XM_370665 XM_370849 XM_370995 XM_371461 XM_371754 XM_371760 XM_371943 XM_372198 XM_373561 XM_373682 XM_373704 XM_373925 XM_373974 XM_374004 XM_374141 XM_374502 XM_375307 XM_375558 XM_375602 XM_376189 XM_376269 XM_376610 XM_378239 XM_378350 XM_378379 XM_378550 XM_378567 XM_378582 XM_378631 XM_378708 XM_378823 XM_378835 XM_378883 XM_378949 XM_378976 XM_379029 XM_379215 XM_379254 XM_379273 XM_379309 XM_379391 XM_379406 XM_379432 XM_379540 XM_379643 XM_379651 XM_379668 XM_379831 XM_379920 XM_495909 XM_495937 XM_495939 XM_496191 XM_496251 XM_496449 XM_496672 XM_496766 XM_496836 XM_496870 XM_496877 XM_496882 XM_496889 XM_496912 XM_498436 XM_498491 XM_498500 XM_498507 XM_498561 XM_498567 XM_498569 XM_498572 XM_498607 XM_498810 XM_498818 XM_498834 XM_498835 XM_498841 XM_498899 XM_498904 XM_498917 XM_499022 XM_499035 XM_499056 XM_499068 XM_499088 XM_499114 XM_499147 XM_499187 XM_499286 XM_499295 XM_499301 XM_499312 XM_499354 XM_499356 XM_499503 XM_499519 XM_499543 XM_499602 XR_000167 XR_000184 XR_000268 XR_000275 XR_000294	Genes with multiple seed matches: NM_001004321 NM_001010867 NM_001012714 NM_001013685 NM_001017528 NM_001017529 NM_001017530 NM_001018050 NM_001018051 NM_001018052 NM_002957 NM_003190 NM_003486 NM_004220 NM_004711 NM_004762 NM_004776 NM_004992 NM_005093 NM_005928 NM_006035 NM_006291 NM_006546 NM_007354 NM_012102 NM_012398 NM_014286 NM_015366 NM_017456 NM_017701 NM_019594 NM_020062 NM_024701 NM_024845 NM_032329 NM_032853 NM_033387 NM_134268 NM_138338 NM_144692 NM_153350 NM_175864 NM_181333 NM_182612 NM_194295 NM_199461 NM_207462 NM_207483 NM_207644 XM_032901 XM_117117 XM_295213 XM_373704 XM_378350 XM_379273 XM_379391 XM_379406 XM_379920 XM_496449 XM_496877 XM_496889 XM_498500 XM_498835 XM_498841 XM_499022 XM_499068 XM_499312 XM_499519 XR_000275

For Details about the algorithm please see
"3' UTR seed matches, but not overall identity, are associated with RNAi off-targets" ,Nature Methods - 3, 199 - 204 (2006)

VIRsiRNAdb

Database of Viral siRNA / shRNA