VIRsiRNAdb

Predicted off-targets seeds for siRNA "guuacuuggacuaacguca" Using siRNA Seed Locator Algorithm

siRNA Seed Locator
Total Genes with at least one seed match :1109.
Total Genes with multiple seed matches: 72.
Genes with at least one seed match: NM_000029 NM_000074 NM_000076 NM_000108 NM_000141 NM_000264 NM_000268 NM_000276 NM_000365 NM_000415 NM_000451 NM_000522 NM_000555 NM_000564 NM_000573 NM_000588 NM_000614 NM_000618 NM_000633 NM_000634 NM_000723 NM_000821 NM_000831 NM_000851 NM_000887 NM_000945 NM_000998 NM_001001331 NM_001001343 NM_001001395 NM_001001560 NM_001001711 NM_001001894 NM_001002260 NM_001002840 NM_001003682 NM_001003792 NM_001003793 NM_001004197 NM_001004285 NM_001004286 NM_001004300 NM_001004302 NM_001004306 NM_001004328 NM_001004329 NM_001004346 NM_001004355 NM_001004720 NM_001004722 NM_001005387 NM_001005388 NM_001005476 NM_001006605 NM_001006656 NM_001006667 NM_001007067 NM_001007068 NM_001007069 NM_001007070 NM_001007097 NM_001007279 NM_001007471 NM_001007543 NM_001008390 NM_001008407 NM_001008408 NM_001008539 NM_001008658 NM_001008726 NM_001008777 NM_001009553 NM_001009566 NM_001009909 NM_001009939 NM_001010000 NM_001010867 NM_001010908 NM_001010915 NM_001010982 NM_001011547 NM_001011553 NM_001011666 NM_001012426 NM_001012427 NM_001012508 NM_001012626 NM_001012651 NM_001012711 NM_001012715 NM_001012964 NM_001012965 NM_001012966 NM_001012977 NM_001013000 NM_001013005 NM_001013406 NM_001013692 NM_001013698 NM_001013701 NM_001013721 NM_001013724 NM_001014279 NM_001014342 NM_001014440 NM_001014797 NM_001015887 NM_001017392 NM_001017395 NM_001017523 NM_001017922 NM_001017975 NM_001018053 NM_001018067 NM_001018068 NM_001018069 NM_001018072 NM_001018111 NM_001020658 NM_001024677 NM_001024843 NM_001024858 NM_001024959 NM_001024960 NM_001025107 NM_001034 NM_001044 NM_001056 NM_001077 NM_001111 NM_001138 NM_001167 NM_001174 NM_001224 NM_001310 NM_001346 NM_001408 NM_001420 NM_001439 NM_001514 NM_001587 NM_001649 NM_001650 NM_001668 NM_001683 NM_001704 NM_001788 NM_001793 NM_001801 NM_001821 NM_001842 NM_001896 NM_001911 NM_001913 NM_001951 NM_001980 NM_002001 NM_002040 NM_002070 NM_002126 NM_002220 NM_002247 NM_002275 NM_002286 NM_002334 NM_002359 NM_002376 NM_002416 NM_002442 NM_002501 NM_002522 NM_002595 NM_002596 NM_002613 NM_002677 NM_002688 NM_002725 NM_002730 NM_002739 NM_002740 NM_002760 NM_002768 NM_002774 NM_002847 NM_002857 NM_002879 NM_002883 NM_002931 NM_002938 NM_002959 NM_002996 NM_002998 NM_003004 NM_003016 NM_003032 NM_003033 NM_003036 NM_003046 NM_003048 NM_003123 NM_003152 NM_003202 NM_003247 NM_003249 NM_003277 NM_003281 NM_003316 NM_003319 NM_003417 NM_003438 NM_003462 NM_003486 NM_003522 NM_003576 NM_003581 NM_003612 NM_003628 NM_003633 NM_003660 NM_003663 NM_003679 NM_003681 NM_003703 NM_003722 NM_003758 NM_003817 NM_003834 NM_003927 NM_003929 NM_003949 NM_003950 NM_004028 NM_004043 NM_004101 NM_004220 NM_004234 NM_004235 NM_004262 NM_004263 NM_004331 NM_004339 NM_004367 NM_004370 NM_004392 NM_004479 NM_004488 NM_004497 NM_004646 NM_004650 NM_004667 NM_004673 NM_004681 NM_004724 NM_004749 NM_004781 NM_004804 NM_004824 NM_004848 NM_004894 NM_004898 NM_004904 NM_004912 NM_004938 NM_004973 NM_005027 NM_005044 NM_005057 NM_005076 NM_005088 NM_005109 NM_005149 NM_005187 NM_005194 NM_005197 NM_005208 NM_005245 NM_005336 NM_005339 NM_005359 NM_005382 NM_005385 NM_005397 NM_005434 NM_005449 NM_005515 NM_005539 NM_005625 NM_005627 NM_005647 NM_005656 NM_005699 NM_005718 NM_005766 NM_005786 NM_005789 NM_005826 NM_005845 NM_005860 NM_005927 NM_005935 NM_005987 NM_005996 NM_006009 NM_006011 NM_006054 NM_006061 NM_006069 NM_006106 NM_006145 NM_006162 NM_006241 NM_006242 NM_006322 NM_006359 NM_006373 NM_006407 NM_006454 NM_006464 NM_006485 NM_006500 NM_006546 NM_006551 NM_006552 NM_006578 NM_006598 NM_006599 NM_006603 NM_006661 NM_006673 NM_006698 NM_006725 NM_006729 NM_006732 NM_006777 NM_006779 NM_006847 NM_006904 NM_006943 NM_006965 NM_007000 NM_007129 NM_007212 NM_007227 NM_007249 NM_007261 NM_007286 NM_007316 NM_007335 NM_007336 NM_007338 NM_007363 NM_007368 NM_012090 NM_012189 NM_012262 NM_012281 NM_012309 NM_012334 NM_012346 NM_012431 NM_012443 NM_012483 NM_013230 NM_013244 NM_013276 NM_013281 NM_013365 NM_013381 NM_013382 NM_013423 NM_013427 NM_013435 NM_014005 NM_014066 NM_014191 NM_014230 NM_014325 NM_014333 NM_014335 NM_014391 NM_014456 NM_014468 NM_014489 NM_014504 NM_014507 NM_014519 NM_014548 NM_014587 NM_014636 NM_014650 NM_014676 NM_014702 NM_014713 NM_014736 NM_014776 NM_014783 NM_014789 NM_014801 NM_014841 NM_014854 NM_014859 NM_014862 NM_014880 NM_014892 NM_014898 NM_014911 NM_014944 NM_014946 NM_015008 NM_015033 NM_015074 NM_015088 NM_015090 NM_015103 NM_015115 NM_015133 NM_015155 NM_015167 NM_015191 NM_015205 NM_015229 NM_015288 NM_015313 NM_015314 NM_015319 NM_015328 NM_015338 NM_015353 NM_015369 NM_015428 NM_015447 NM_015478 NM_015497 NM_015530 NM_015559 NM_015560 NM_015602 NM_015640 NM_015659 NM_015696 NM_015711 NM_015840 NM_015841 NM_015855 NM_015892 NM_015981 NM_016019 NM_016048 NM_016103 NM_016143 NM_016154 NM_016194 NM_016201 NM_016212 NM_016258 NM_016280 NM_016289 NM_016337 NM_016358 NM_016376 NM_016418 NM_016467 NM_016548 NM_016553 NM_016562 NM_016569 NM_016577 NM_016831 NM_016930 NM_017431 NM_017514 NM_017545 NM_017586 NM_017602 NM_017645 NM_017684 NM_017715 NM_017732 NM_017824 NM_017835 NM_017850 NM_017863 NM_017968 NM_017999 NM_018011 NM_018028 NM_018035 NM_018048 NM_018061 NM_018069 NM_018077 NM_018163 NM_018171 NM_018181 NM_018197 NM_018260 NM_018273 NM_018286 NM_018312 NM_018316 NM_018360 NM_018393 NM_018424 NM_018469 NM_018538 NM_018640 NM_018685 NM_018688 NM_018839 NM_018841 NM_018941 NM_018942 NM_018947 NM_018976 NM_018991 NM_019020 NM_019085 NM_019087 NM_019089 NM_019094 NM_019884 NM_020132 NM_020208 NM_020238 NM_020338 NM_020353 NM_020382 NM_020529 NM_020531 NM_020652 NM_020673 NM_020689 NM_020708 NM_020715 NM_020742 NM_020752 NM_020796 NM_020803 NM_020820 NM_020821 NM_020844 NM_020918 NM_020933 NM_020946 NM_020952 NM_020971 NM_020972 NM_020975 NM_021038 NM_021192 NM_021200 NM_021253 NM_021620 NM_021798 NM_021961 NM_022048 NM_022050 NM_022088 NM_022103 NM_022136 NM_022148 NM_022153 NM_022337 NM_022351 NM_022405 NM_022436 NM_022473 NM_022566 NM_022733 NM_022754 NM_022831 NM_022836 NM_022912 NM_022969 NM_022970 NM_022972 NM_022975 NM_023028 NM_023029 NM_023030 NM_023031 NM_023037 NM_023076 NM_023107 NM_023108 NM_024013 NM_024297 NM_024308 NM_024590 NM_024645 NM_024676 NM_024693 NM_024721 NM_024725 NM_024736 NM_024769 NM_024792 NM_024832 NM_024834 NM_024843 NM_024878 NM_024881 NM_024896 NM_024971 NM_025010 NM_025160 NM_025176 NM_025213 NM_025225 NM_025232 NM_030569 NM_030578 NM_030648 NM_030650 NM_030651 NM_030670 NM_030671 NM_030781 NM_030783 NM_030806 NM_030900 NM_031211 NM_031268 NM_031282 NM_031295 NM_031409 NM_031418 NM_031426 NM_031431 NM_031457 NM_032039 NM_032102 NM_032182 NM_032189 NM_032221 NM_032228 NM_032251 NM_032268 NM_032271 NM_032281 NM_032295 NM_032298 NM_032354 NM_032361 NM_032373 NM_032382 NM_032383 NM_032471 NM_032557 NM_032579 NM_032584 NM_032632 NM_032638 NM_032711 NM_032780 NM_032801 NM_032817 NM_032838 NM_032843 NM_032905 NM_032910 NM_032968 NM_032969 NM_032973 NM_032982 NM_032983 NM_032984 NM_033034 NM_033044 NM_033052 NM_033053 NM_033056 NM_033119 NM_033121 NM_033213 NM_033282 NM_033392 NM_033397 NM_033516 NM_033634 NM_033647 NM_033671 NM_052847 NM_052861 NM_053052 NM_057169 NM_057170 NM_058238 NM_078628 NM_080546 NM_080645 NM_080656 NM_080666 NM_080738 NM_080759 NM_080760 NM_080860 NM_080862 NM_080872 NM_130385 NM_130831 NM_130832 NM_130833 NM_130834 NM_130835 NM_130836 NM_130837 NM_130842 NM_130843 NM_133378 NM_133432 NM_133437 NM_133443 NM_133445 NM_133448 NM_133451 NM_133627 NM_134422 NM_134423 NM_134424 NM_138393 NM_138440 NM_138457 NM_138573 NM_138713 NM_138714 NM_138784 NM_138788 NM_139018 NM_139073 NM_144570 NM_144586 NM_144599 NM_144601 NM_144617 NM_144621 NM_144633 NM_144657 NM_145068 NM_145187 NM_145188 NM_145189 NM_145190 NM_145296 NM_145305 NM_145326 NM_145328 NM_145341 NM_145861 NM_145913 NM_147131 NM_147132 NM_147164 NM_148915 NM_152268 NM_152280 NM_152295 NM_152306 NM_152322 NM_152344 NM_152354 NM_152437 NM_152470 NM_152475 NM_152519 NM_152523 NM_152538 NM_152554 NM_152557 NM_152594 NM_152613 NM_152702 NM_152835 NM_152896 NM_152939 NM_153184 NM_153232 NM_153235 NM_153262 NM_153442 NM_153451 NM_153462 NM_153463 NM_153611 NM_153712 NM_153714 NM_153718 NM_153719 NM_153757 NM_153768 NM_170610 NM_170751 NM_170752 NM_170753 NM_170754 NM_170768 NM_171825 NM_172016 NM_172127 NM_172128 NM_172239 NM_172242 NM_172346 NM_172387 NM_172388 NM_172389 NM_173042 NM_173043 NM_173044 NM_173214 NM_173216 NM_173217 NM_173344 NM_173463 NM_173476 NM_173545 NM_173562 NM_173570 NM_173576 NM_173591 NM_173627 NM_173640 NM_173675 NM_173687 NM_173700 NM_173833 NM_173851 NM_174891 NM_175726 NM_175898 NM_175901 NM_175921 NM_175931 NM_176792 NM_176799 NM_176824 NM_176825 NM_176863 NM_177401 NM_177424 NM_177937 NM_177977 NM_178008 NM_178014 NM_178126 NM_178151 NM_178152 NM_178153 NM_178226 NM_178426 NM_178427 NM_178514 NM_178864 NM_181078 NM_181079 NM_181332 NM_181500 NM_181504 NM_181523 NM_181524 NM_181553 NM_181554 NM_181555 NM_181720 NM_181723 NM_181726 NM_181782 NM_181789 NM_181794 NM_181795 NM_181826 NM_181827 NM_181828 NM_181829 NM_181830 NM_181832 NM_181833 NM_181834 NM_181835 NM_182477 NM_182483 NM_182525 NM_182526 NM_182540 NM_182586 NM_182621 NM_182740 NM_182894 NM_182898 NM_182899 NM_182971 NM_183065 NM_183337 NM_183373 NM_183376 NM_194310 NM_194356 NM_194439 NM_194454 NM_194455 NM_194456 NM_198076 NM_198147 NM_198152 NM_198271 NM_198274 NM_198316 NM_198391 NM_198441 NM_198451 NM_198480 NM_198508 NM_198513 NM_198524 NM_198531 NM_198557 NM_198576 NM_198586 NM_199040 NM_199122 NM_199168 NM_199324 NM_199426 NM_199436 NM_199461 NM_201348 NM_201428 NM_201429 NM_201628 NM_201632 NM_201634 NM_203346 NM_203422 NM_203423 NM_203446 NM_203451 NM_203453 NM_205852 NM_206835 NM_206914 NM_206944 NM_206945 NM_206946 NM_206947 NM_207113 NM_207285 NM_207292 NM_207293 NM_207294 NM_207295 NM_207296 NM_207297 NM_207324 NM_207349 NM_207368 NM_207391 NM_207405 NM_207406 NM_207411 NM_207435 NM_207451 NM_207458 NM_207481 NM_207485 NM_207502 NM_207518 NM_212502 NM_212503 NM_213568 NM_213589 NM_213604 NM_213648 XM_027307 XM_032571 XM_042066 XM_042978 XM_048592 XM_056455 XM_059909 XM_087672 XM_093839 XM_097580 XM_117451 XM_208097 XM_290342 XM_290597 XM_290737 XM_291277 XM_295213 XM_370838 XM_371177 XM_371354 XM_371374 XM_371461 XM_371647 XM_372019 XM_372028 XM_372030 XM_372267 XM_373500 XM_373566 XM_373578 XM_373704 XM_373881 XM_374003 XM_374260 XM_374915 XM_375292 XM_375491 XM_375500 XM_375606 XM_375646 XM_376062 XM_376303 XM_376305 XM_376652 XM_376680 XM_376783 XM_376784 XM_376986 XM_378273 XM_378299 XM_378372 XM_378374 XM_378394 XM_378491 XM_378730 XM_378735 XM_378921 XM_379060 XM_379094 XM_379114 XM_379135 XM_379254 XM_379273 XM_379276 XM_379438 XM_379452 XM_379456 XM_379573 XM_379595 XM_379619 XM_379664 XM_379665 XM_379892 XM_379920 XM_379934 XM_380151 XM_495937 XM_495950 XM_496050 XM_496088 XM_496388 XM_496390 XM_496749 XM_496836 XM_496879 XM_496959 XM_496966 XM_496981 XM_496982 XM_496983 XM_496984 XM_496985 XM_498439 XM_498473 XM_498481 XM_498624 XM_498646 XM_498651 XM_498757 XM_498758 XM_498760 XM_498761 XM_498765 XM_498766 XM_498767 XM_498768 XM_498769 XM_498770 XM_498771 XM_498772 XM_498773 XM_498774 XM_498777 XM_498778 XM_498779 XM_498780 XM_498781 XM_498782 XM_498783 XM_498784 XM_498785 XM_498786 XM_498789 XM_498801 XM_498802 XM_498804 XM_498835 XM_498917 XM_498991 XM_499051 XM_499298 XM_499569 XR_000182 XR_000184 XR_000216 XR_000265 XR_000294	Genes with multiple seed matches: NM_001008408 NM_001012966 NM_001801 NM_001911 NM_002879 NM_003004 NM_003036 NM_003486 NM_004101 NM_005197 NM_005339 NM_005434 NM_006599 NM_007335 NM_007336 NM_007338 NM_014504 NM_015155 NM_015229 NM_015369 NM_019094 NM_020820 NM_020844 NM_020918 NM_020933 NM_021038 NM_022836 NM_023028 NM_023037 NM_024693 NM_032354 NM_033053 NM_033121 NM_134422 NM_134423 NM_134424 NM_138713 NM_138714 NM_139073 NM_153757 NM_172239 NM_172346 NM_173214 NM_173851 NM_176799 NM_182740 NM_183065 NM_194310 NM_194356 NM_199040 NM_206835 NM_207292 NM_207293 NM_207294 NM_207295 NM_207296 NM_207297 NM_207405 NM_207502 XM_371461 XM_373704 XM_376652 XM_376784 XM_378921 XM_379273 XM_379438 XM_379892 XM_496983 XM_496984 XM_496985 XM_498481 XM_498646

For Details about the algorithm please see
"3' UTR seed matches, but not overall identity, are associated with RNAi off-targets" ,Nature Methods - 3, 199 - 204 (2006)

VIRsiRNAdb

Database of Viral siRNA / shRNA