VIRsiRNAdb

Predicted off-targets seeds for siRNA "acgaccuguacgcgaacacgg" Using siRNA Seed Locator Algorithm

siRNA Seed Locator
Total Genes with at least one seed match :1509.
Total Genes with multiple seed matches: 102.
Genes with at least one seed match: NM_000092 NM_000093 NM_000097 NM_000109 NM_000113 NM_000128 NM_000214 NM_000253 NM_000264 NM_000303 NM_000304 NM_000317 NM_000330 NM_000332 NM_000334 NM_000340 NM_000351 NM_000353 NM_000368 NM_000407 NM_000434 NM_000455 NM_000531 NM_000539 NM_000547 NM_000573 NM_000596 NM_000598 NM_000629 NM_000635 NM_000651 NM_000664 NM_000705 NM_000833 NM_000838 NM_000842 NM_000857 NM_000868 NM_000875 NM_000880 NM_000890 NM_000891 NM_000917 NM_000933 NM_000935 NM_000997 NM_001000 NM_001001188 NM_001001483 NM_001001678 NM_001001681 NM_001001697 NM_001001699 NM_001001703 NM_001001928 NM_001001929 NM_001001930 NM_001002841 NM_001002843 NM_001002857 NM_001002858 NM_001002860 NM_001002861 NM_001002881 NM_001002926 NM_001003398 NM_001003406 NM_001003407 NM_001003408 NM_001003674 NM_001003675 NM_001004285 NM_001004286 NM_001004307 NM_001004317 NM_001004342 NM_001004349 NM_001004417 NM_001004421 NM_001004422 NM_001005372 NM_001005388 NM_001005409 NM_001005502 NM_001005735 NM_001006114 NM_001006605 NM_001006616 NM_001006624 NM_001006625 NM_001006684 NM_001007279 NM_001007466 NM_001007529 NM_001007535 NM_001007546 NM_001007553 NM_001007794 NM_001008220 NM_001008409 NM_001008493 NM_001008495 NM_001008744 NM_001009554 NM_001009813 NM_001009820 NM_001009880 NM_001009881 NM_001009882 NM_001009883 NM_001009956 NM_001010882 NM_001010980 NM_001010982 NM_001011656 NM_001012267 NM_001012423 NM_001012424 NM_001012426 NM_001012427 NM_001012446 NM_001012478 NM_001012711 NM_001012733 NM_001012734 NM_001013029 NM_001013398 NM_001013617 NM_001013640 NM_001013676 NM_001013679 NM_001013683 NM_001013716 NM_001014283 NM_001014987 NM_001014988 NM_001014989 NM_001015051 NM_001015886 NM_001017396 NM_001017405 NM_001017440 NM_001017916 NM_001017917 NM_001017918 NM_001017962 NM_001017970 NM_001018000 NM_001018025 NM_001018029 NM_001020658 NM_001023562 NM_001023565 NM_001024216 NM_001024460 NM_001024630 NM_001024676 NM_001024736 NM_001024947 NM_001025076 NM_001025077 NM_001025079 NM_001025080 NM_001025201 NM_001025247 NM_001080 NM_001094 NM_001103 NM_001167 NM_001169 NM_001204 NM_001215 NM_001286 NM_001287 NM_001332 NM_001387 NM_001401 NM_001412 NM_001414 NM_001415 NM_001419 NM_001420 NM_001422 NM_001449 NM_001503 NM_001535 NM_001557 NM_001561 NM_001614 NM_001630 NM_001632 NM_001642 NM_001696 NM_001714 NM_001718 NM_001725 NM_001773 NM_001777 NM_001792 NM_001806 NM_001821 NM_001822 NM_001835 NM_001874 NM_001908 NM_001915 NM_001935 NM_001956 NM_001961 NM_001981 NM_001992 NM_002025 NM_002052 NM_002065 NM_002073 NM_002077 NM_002098 NM_002111 NM_002135 NM_002154 NM_002170 NM_002207 NM_002229 NM_002241 NM_002255 NM_002313 NM_002337 NM_002353 NM_002357 NM_002367 NM_002417 NM_002476 NM_002481 NM_002501 NM_002514 NM_002651 NM_002655 NM_002662 NM_002709 NM_002719 NM_002725 NM_002742 NM_002747 NM_002811 NM_002827 NM_002832 NM_002847 NM_002857 NM_002861 NM_002869 NM_002901 NM_002931 NM_002957 NM_003003 NM_003014 NM_003032 NM_003045 NM_003071 NM_003112 NM_003132 NM_003150 NM_003165 NM_003167 NM_003185 NM_003190 NM_003215 NM_003245 NM_003246 NM_003249 NM_003281 NM_003325 NM_003330 NM_003382 NM_003404 NM_003406 NM_003455 NM_003474 NM_003483 NM_003490 NM_003501 NM_003576 NM_003583 NM_003596 NM_003600 NM_003605 NM_003657 NM_003676 NM_003681 NM_003701 NM_003704 NM_003768 NM_003789 NM_003822 NM_003855 NM_003856 NM_003873 NM_003881 NM_003898 NM_003941 NM_003947 NM_003949 NM_003966 NM_004006 NM_004007 NM_004009 NM_004010 NM_004011 NM_004012 NM_004013 NM_004014 NM_004015 NM_004016 NM_004017 NM_004018 NM_004020 NM_004021 NM_004022 NM_004023 NM_004039 NM_004058 NM_004090 NM_004107 NM_004129 NM_004202 NM_004204 NM_004212 NM_004228 NM_004274 NM_004285 NM_004296 NM_004311 NM_004316 NM_004319 NM_004330 NM_004335 NM_004338 NM_004348 NM_004356 NM_004364 NM_004402 NM_004407 NM_004488 NM_004553 NM_004560 NM_004562 NM_004566 NM_004579 NM_004605 NM_004622 NM_004630 NM_004650 NM_004711 NM_004725 NM_004730 NM_004734 NM_004744 NM_004745 NM_004797 NM_004839 NM_004843 NM_004848 NM_004863 NM_004901 NM_004911 NM_004955 NM_004968 NM_004975 NM_004985 NM_004996 NM_005036 NM_005063 NM_005088 NM_005103 NM_005105 NM_005116 NM_005154 NM_005173 NM_005201 NM_005216 NM_005226 NM_005297 NM_005338 NM_005342 NM_005398 NM_005410 NM_005431 NM_005436 NM_005456 NM_005458 NM_005472 NM_005495 NM_005498 NM_005516 NM_005538 NM_005539 NM_005565 NM_005584 NM_005587 NM_005610 NM_005630 NM_005658 NM_005668 NM_005707 NM_005735 NM_005740 NM_005748 NM_005766 NM_005814 NM_005831 NM_005840 NM_005857 NM_005859 NM_005860 NM_005877 NM_005882 NM_005883 NM_005902 NM_005909 NM_005920 NM_005955 NM_005957 NM_005971 NM_005975 NM_005990 NM_006029 NM_006037 NM_006042 NM_006048 NM_006060 NM_006090 NM_006094 NM_006141 NM_006162 NM_006215 NM_006256 NM_006282 NM_006285 NM_006287 NM_006315 NM_006379 NM_006387 NM_006399 NM_006404 NM_006415 NM_006464 NM_006466 NM_006474 NM_006477 NM_006482 NM_006492 NM_006493 NM_006500 NM_006504 NM_006561 NM_006563 NM_006598 NM_006614 NM_006650 NM_006670 NM_006691 NM_006720 NM_006737 NM_006771 NM_006798 NM_006822 NM_006873 NM_006892 NM_006910 NM_006974 NM_006991 NM_007014 NM_007028 NM_007030 NM_007047 NM_007050 NM_007098 NM_007158 NM_007174 NM_007184 NM_007194 NM_007203 NM_007238 NM_007279 NM_007353 NM_007357 NM_007362 NM_007371 NM_012072 NM_012074 NM_012090 NM_012171 NM_012184 NM_012197 NM_012213 NM_012219 NM_012232 NM_012264 NM_012282 NM_012290 NM_012302 NM_012309 NM_012326 NM_012328 NM_012334 NM_012341 NM_012384 NM_012399 NM_012402 NM_012413 NM_012425 NM_012443 NM_013231 NM_013261 NM_013275 NM_013296 NM_013302 NM_013322 NM_013323 NM_013389 NM_013399 NM_013416 NM_013446 NM_013449 NM_013987 NM_013988 NM_014056 NM_014155 NM_014157 NM_014271 NM_014286 NM_014294 NM_014322 NM_014341 NM_014354 NM_014386 NM_014387 NM_014388 NM_014468 NM_014480 NM_014489 NM_014506 NM_014511 NM_014550 NM_014556 NM_014573 NM_014586 NM_014587 NM_014590 NM_014615 NM_014667 NM_014671 NM_014676 NM_014732 NM_014762 NM_014767 NM_014770 NM_014783 NM_014792 NM_014797 NM_014809 NM_014830 NM_014835 NM_014837 NM_014840 NM_014850 NM_014859 NM_014862 NM_014867 NM_014910 NM_014918 NM_014919 NM_014934 NM_014959 NM_015009 NM_015011 NM_015035 NM_015040 NM_015051 NM_015056 NM_015057 NM_015082 NM_015090 NM_015092 NM_015113 NM_015138 NM_015151 NM_015202 NM_015205 NM_015206 NM_015225 NM_015226 NM_015259 NM_015261 NM_015264 NM_015267 NM_015269 NM_015289 NM_015299 NM_015317 NM_015329 NM_015346 NM_015347 NM_015409 NM_015458 NM_015475 NM_015506 NM_015548 NM_015557 NM_015577 NM_015608 NM_015627 NM_015630 NM_015635 NM_015678 NM_015691 NM_015693 NM_015868 NM_015886 NM_015894 NM_015896 NM_015898 NM_015949 NM_015981 NM_015993 NM_015995 NM_016002 NM_016107 NM_016114 NM_016133 NM_016138 NM_016183 NM_016227 NM_016240 NM_016261 NM_016263 NM_016297 NM_016298 NM_016334 NM_016388 NM_016422 NM_016475 NM_016535 NM_016545 NM_016573 NM_016601 NM_016606 NM_016647 NM_016953 NM_017457 NM_017482 NM_017484 NM_017487 NM_017550 NM_017556 NM_017592 NM_017607 NM_017621 NM_017622 NM_017628 NM_017643 NM_017649 NM_017661 NM_017665 NM_017681 NM_017693 NM_017700 NM_017728 NM_017751 NM_017765 NM_017775 NM_017791 NM_017798 NM_017811 NM_017819 NM_017832 NM_017863 NM_017883 NM_017891 NM_017925 NM_017946 NM_017951 NM_017958 NM_017990 NM_018008 NM_018022 NM_018024 NM_018047 NM_018058 NM_018089 NM_018091 NM_018128 NM_018137 NM_018141 NM_018167 NM_018178 NM_018185 NM_018212 NM_018222 NM_018238 NM_018243 NM_018269 NM_018280 NM_018303 NM_018319 NM_018332 NM_018396 NM_018438 NM_018469 NM_018555 NM_018579 NM_018590 NM_018652 NM_018660 NM_018667 NM_018669 NM_018691 NM_018698 NM_018702 NM_018703 NM_018704 NM_018706 NM_018891 NM_018898 NM_018899 NM_018900 NM_018901 NM_018902 NM_018903 NM_018904 NM_018905 NM_018906 NM_018907 NM_018908 NM_018909 NM_018910 NM_018911 NM_018941 NM_018975 NM_018999 NM_019028 NM_019034 NM_019044 NM_019069 NM_019559 NM_019862 NM_019898 NM_019899 NM_019900 NM_019901 NM_019902 NM_020133 NM_020137 NM_020150 NM_020154 NM_020160 NM_020179 NM_020182 NM_020210 NM_020223 NM_020226 NM_020227 NM_020238 NM_020245 NM_020340 NM_020346 NM_020412 NM_020482 NM_020526 NM_020663 NM_020673 NM_020684 NM_020685 NM_020698 NM_020699 NM_020702 NM_020717 NM_020745 NM_020761 NM_020762 NM_020776 NM_020786 NM_020800 NM_020856 NM_020873 NM_020909 NM_021088 NM_021096 NM_021116 NM_021167 NM_021202 NM_021213 NM_021260 NM_021572 NM_021638 NM_021735 NM_021736 NM_021737 NM_021808 NM_021813 NM_021910 NM_021945 NM_021966 NM_021977 NM_022041 NM_022046 NM_022085 NM_022098 NM_022103 NM_022114 NM_022171 NM_022308 NM_022350 NM_022458 NM_022469 NM_022479 NM_022744 NM_022748 NM_022755 NM_022763 NM_022828 NM_022898 NM_022901 NM_022905 NM_023008 NM_023011 NM_023018 NM_023914 NM_024034 NM_024043 NM_024072 NM_024086 NM_024094 NM_024334 NM_024345 NM_024511 NM_024512 NM_024557 NM_024563 NM_024607 NM_024610 NM_024627 NM_024628 NM_024718 NM_024719 NM_024733 NM_024758 NM_024768 NM_024804 NM_024824 NM_024866 NM_024874 NM_024875 NM_024897 NM_024910 NM_024915 NM_024941 NM_024944 NM_024948 NM_024989 NM_025023 NM_025049 NM_025097 NM_025107 NM_025154 NM_025191 NM_025233 NM_025240 NM_030574 NM_030582 NM_030622 NM_030626 NM_030650 NM_030762 NM_030779 NM_030782 NM_030799 NM_030809 NM_030810 NM_030964 NM_031265 NM_031411 NM_031448 NM_031468 NM_031484 NM_031849 NM_031857 NM_031860 NM_031886 NM_031904 NM_031912 NM_031949 NM_032010 NM_032023 NM_032047 NM_032102 NM_032105 NM_032121 NM_032131 NM_032160 NM_032189 NM_032211 NM_032217 NM_032251 NM_032255 NM_032270 NM_032271 NM_032276 NM_032281 NM_032287 NM_032373 NM_032374 NM_032409 NM_032423 NM_032525 NM_032554 NM_032566 NM_032581 NM_032682 NM_032706 NM_032714 NM_032777 NM_032779 NM_032788 NM_032853 NM_032957 NM_032967 NM_033012 NM_033017 NM_033044 NM_033085 NM_033089 NM_033091 NM_033106 NM_033109 NM_033199 NM_033200 NM_033213 NM_033225 NM_033262 NM_033346 NM_033360 NM_033397 NM_033426 NM_052816 NM_052854 NM_052905 NM_052916 NM_052917 NM_052928 NM_052941 NM_052949 NM_052996 NM_053042 NM_053055 NM_053056 NM_053064 NM_053282 NM_053286 NM_054016 NM_057159 NM_058172 NM_058183 NM_058184 NM_058240 NM_078625 NM_080387 NM_080588 NM_080589 NM_080590 NM_080618 NM_080626 NM_080656 NM_080669 NM_080687 NM_080758 NM_080836 NM_080915 NM_080917 NM_130387 NM_130435 NM_130444 NM_130445 NM_130459 NM_130465 NM_130466 NM_130783 NM_130842 NM_130843 NM_130848 NM_133170 NM_133265 NM_133330 NM_133331 NM_133332 NM_133333 NM_133334 NM_133335 NM_133336 NM_133375 NM_133444 NM_133456 NM_133632 NM_133633 NM_134433 NM_138323 NM_138350 NM_138415 NM_138445 NM_138457 NM_138576 NM_138704 NM_138706 NM_138771 NM_138779 NM_138801 NM_138966 NM_138983 NM_139201 NM_139276 NM_139279 NM_139323 NM_144498 NM_144565 NM_144599 NM_144618 NM_144628 NM_144642 NM_144693 NM_144717 NM_144781 NM_144969 NM_144995 NM_145010 NM_145013 NM_145042 NM_145065 NM_145201 NM_145206 NM_145230 NM_145231 NM_145253 NM_145282 NM_145690 NM_145693 NM_145699 NM_145862 NM_145896 NM_145912 NM_147150 NM_147189 NM_147780 NM_147781 NM_147782 NM_147783 NM_148170 NM_148571 NM_152244 NM_152247 NM_152253 NM_152264 NM_152271 NM_152292 NM_152301 NM_152314 NM_152362 NM_152367 NM_152379 NM_152411 NM_152418 NM_152439 NM_152444 NM_152445 NM_152454 NM_152472 NM_152507 NM_152510 NM_152527 NM_152542 NM_152558 NM_152583 NM_152588 NM_152606 NM_152619 NM_152624 NM_152636 NM_152654 NM_152681 NM_152689 NM_152724 NM_152760 NM_152831 NM_152890 NM_152913 NM_153013 NM_153025 NM_153032 NM_153033 NM_153045 NM_153181 NM_153220 NM_153235 NM_153247 NM_153321 NM_153322 NM_153330 NM_153333 NM_153358 NM_153375 NM_153425 NM_153443 NM_153487 NM_153608 NM_153619 NM_153639 NM_153709 NM_153717 NM_153752 NM_153757 NM_153810 NM_153812 NM_170740 NM_171825 NM_172242 NM_172370 NM_172375 NM_172386 NM_172387 NM_172388 NM_172389 NM_173079 NM_173156 NM_173157 NM_173216 NM_173217 NM_173342 NM_173354 NM_173459 NM_173470 NM_173476 NM_173509 NM_173528 NM_173557 NM_173583 NM_173611 NM_173640 NM_173699 NM_173795 NM_173805 NM_173808 NM_173833 NM_174953 NM_174954 NM_174955 NM_174956 NM_174957 NM_174958 NM_175061 NM_175064 NM_175075 NM_175619 NM_175719 NM_175721 NM_175722 NM_175848 NM_175849 NM_175850 NM_175885 NM_175898 NM_175901 NM_175907 NM_175911 NM_176853 NM_176894 NM_177963 NM_177973 NM_177977 NM_178145 NM_178159 NM_178441 NM_178509 NM_178519 NM_178586 NM_178841 NM_181457 NM_181458 NM_181481 NM_181482 NM_181483 NM_181701 NM_181717 NM_181719 NM_181725 NM_181900 NM_182506 NM_182533 NM_182546 NM_182568 NM_182573 NM_182607 NM_182631 NM_182643 NM_182700 NM_182703 NM_182729 NM_182742 NM_182743 NM_182797 NM_182894 NM_182932 NM_182933 NM_182936 NM_182943 NM_183002 NM_183241 NM_183376 NM_183377 NM_183380 NM_183397 NM_183414 NM_183415 NM_194071 NM_194287 NM_194288 NM_194295 NM_194303 NM_194309 NM_197941 NM_198066 NM_198271 NM_198276 NM_198320 NM_198381 NM_198389 NM_198392 NM_198401 NM_198406 NM_198431 NM_198433 NM_198434 NM_198435 NM_198436 NM_198437 NM_198440 NM_198527 NM_198554 NM_198563 NM_198582 NM_198595 NM_198793 NM_198835 NM_198889 NM_198896 NM_198907 NM_198925 NM_198956 NM_198968 NM_198991 NM_199050 NM_199075 NM_199076 NM_199124 NM_199129 NM_199135 NM_199169 NM_199170 NM_199171 NM_199255 NM_199330 NM_199331 NM_199332 NM_199358 NM_199424 NM_199425 NM_199454 NM_201348 NM_201568 NM_201569 NM_201628 NM_201995 NM_201998 NM_203293 NM_203294 NM_203295 NM_203296 NM_203297 NM_203301 NM_203304 NM_203327 NM_203365 NM_203371 NM_203381 NM_203400 NM_203445 NM_203451 NM_203452 NM_203462 NM_203463 NM_203481 NM_205860 NM_206835 NM_206854 NM_206855 NM_206876 NM_206877 NM_206887 NM_206962 NM_206998 NM_207172 NM_207303 NM_207316 NM_207325 NM_207333 NM_207335 NM_207362 NM_207366 NM_207382 NM_207404 NM_207406 NM_207451 NM_207454 NM_207458 NM_207470 NM_207474 NM_207477 NM_207505 NM_207517 NM_207582 NM_207644 NM_207660 NM_207661 NM_207662 NM_213566 NM_213604 NM_213662 NM_214677 NM_214678 NM_214679 XM_027307 XM_031553 XM_032945 XM_041126 XM_043493 XM_046600 XM_047355 XM_047995 XM_048592 XM_051862 XM_059482 XM_086761 XM_089384 XM_113947 XM_113967 XM_117408 XM_166132 XM_166320 XM_172995 XM_211287 XM_290546 XM_290597 XM_290734 XM_291019 XM_291154 XM_291262 XM_292717 XM_293380 XM_294450 XM_297816 XM_351854 XM_370636 XM_370696 XM_370837 XM_370917 XM_371204 XM_371311 XM_371486 XM_371488 XM_371561 XM_371664 XM_371943 XM_372038 XM_372090 XM_372227 XM_372716 XM_373562 XM_373666 XM_373704 XM_373744 XM_373779 XM_373855 XM_373883 XM_374004 XM_374069 XM_374086 XM_374113 XM_374141 XM_374343 XM_374460 XM_374766 XM_374767 XM_374902 XM_374945 XM_375007 XM_375029 XM_375152 XM_375174 XM_375183 XM_375357 XM_375373 XM_375558 XM_375697 XM_375853 XM_375929 XM_376018 XM_376062 XM_376372 XM_376522 XM_376558 XM_376677 XM_376822 XM_376841 XM_376846 XM_378327 XM_378331 XM_378379 XM_378394 XM_378398 XM_378421 XM_378430 XM_378456 XM_378545 XM_378553 XM_378573 XM_378649 XM_378653 XM_378692 XM_378758 XM_378786 XM_378825 XM_378876 XM_378976 XM_379075 XM_379102 XM_379112 XM_379114 XM_379118 XM_379207 XM_379214 XM_379267 XM_379273 XM_379309 XM_379409 XM_379458 XM_379619 XM_379622 XM_379648 XM_379696 XM_379722 XM_379840 XM_379858 XM_379931 XM_495828 XM_495918 XM_496047 XM_496079 XM_496156 XM_496351 XM_496383 XM_496554 XM_496575 XM_496782 XM_496894 XM_496898 XM_496899 XM_496905 XM_496912 XM_496959 XM_496966 XM_497036 XM_497089 XM_498451 XM_498459 XM_498464 XM_498553 XM_498559 XM_498570 XM_498596 XM_498651 XM_498660 XM_498747 XM_498825 XM_498897 XM_498917 XM_498954 XM_499009 XM_499056 XM_499152 XM_499314 XM_499321 XM_499328 XM_499330 XM_499333 XM_499338 XM_499354 XM_499356 XM_499503 XM_499581 XM_499589 XM_499594 XR_000268	Genes with multiple seed matches: NM_000264 NM_001001681 NM_001003674 NM_001003675 NM_001005372 NM_001009880 NM_001013640 NM_001023565 NM_001167 NM_001169 NM_001286 NM_001412 NM_001420 NM_001718 NM_002077 NM_002827 NM_002861 NM_003190 NM_003215 NM_003330 NM_004338 NM_004630 NM_004745 NM_004797 NM_004863 NM_004996 NM_005063 NM_005975 NM_012402 NM_013261 NM_014732 NM_014792 NM_014867 NM_015035 NM_015092 NM_015264 NM_015267 NM_015346 NM_015458 NM_016263 NM_016298 NM_017946 NM_019862 NM_019898 NM_019899 NM_019900 NM_019901 NM_019902 NM_020210 NM_020673 NM_020761 NM_021116 NM_021202 NM_021735 NM_021736 NM_021737 NM_021966 NM_030582 NM_032047 NM_032160 NM_032271 NM_032281 NM_033225 NM_130444 NM_130445 NM_139279 NM_145013 NM_152253 NM_153757 NM_173583 NM_175898 NM_176853 NM_181481 NM_181482 NM_181483 NM_181725 NM_182607 NM_182729 NM_182742 NM_182743 NM_183414 NM_194309 NM_198925 NM_199331 NM_199332 NM_206835 NM_207451 NM_207477 NM_207582 XM_043493 XM_371204 XM_374113 XM_375029 XM_375373 XM_376558 XM_378456 XM_378758 XM_378825 XM_379458 XM_379840 XM_499056 XM_499503

For Details about the algorithm please see
"3' UTR seed matches, but not overall identity, are associated with RNAi off-targets" ,Nature Methods - 3, 199 - 204 (2006)

VIRsiRNAdb

Database of Viral siRNA / shRNA