VIRsiRNAdb

Predicted off-targets seeds for siRNA "gacgaccugguuacggaaa" Using siRNA Seed Locator Algorithm

siRNA Seed Locator
Total Genes with at least one seed match :1389.
Total Genes with multiple seed matches: 85.
Genes with at least one seed match: NM_000021 NM_000108 NM_000115 NM_000168 NM_000210 NM_000216 NM_000243 NM_000246 NM_000272 NM_000332 NM_000411 NM_000415 NM_000416 NM_000417 NM_000449 NM_000525 NM_000554 NM_000565 NM_000584 NM_000593 NM_000639 NM_000680 NM_000730 NM_000791 NM_000793 NM_000815 NM_000849 NM_000861 NM_000875 NM_000949 NM_000991 NM_001001549 NM_001001550 NM_001001555 NM_001001567 NM_001001568 NM_001001569 NM_001001570 NM_001001571 NM_001001572 NM_001001573 NM_001001574 NM_001001575 NM_001001576 NM_001001577 NM_001001578 NM_001001579 NM_001001580 NM_001001581 NM_001001582 NM_001001583 NM_001001584 NM_001001585 NM_001001698 NM_001001703 NM_001001709 NM_001001870 NM_001001938 NM_001002909 NM_001003674 NM_001003675 NM_001003716 NM_001003801 NM_001003802 NM_001004053 NM_001004054 NM_001004301 NM_001004335 NM_001004347 NM_001004417 NM_001004421 NM_001004422 NM_001004430 NM_001004433 NM_001004441 NM_001005291 NM_001005303 NM_001005359 NM_001005364 NM_001005408 NM_001005473 NM_001005782 NM_001006600 NM_001006617 NM_001006619 NM_001006620 NM_001006621 NM_001007023 NM_001007071 NM_001007262 NM_001007535 NM_001007546 NM_001007559 NM_001008408 NM_001008493 NM_001008494 NM_001008529 NM_001008756 NM_001009584 NM_001009811 NM_001009813 NM_001009992 NM_001010897 NM_001010924 NM_001010971 NM_001010984 NM_001011513 NM_001011514 NM_001011537 NM_001011655 NM_001012339 NM_001012420 NM_001012423 NM_001012651 NM_001012733 NM_001012734 NM_001012982 NM_001013404 NM_001013627 NM_001013655 NM_001013656 NM_001013667 NM_001013675 NM_001013687 NM_001013695 NM_001013696 NM_001013708 NM_001013725 NM_001015508 NM_001017956 NM_001017957 NM_001017958 NM_001018021 NM_001018025 NM_001018050 NM_001018051 NM_001018052 NM_001023565 NM_001024380 NM_001024381 NM_001024601 NM_001024608 NM_001024736 NM_001024843 NM_001025076 NM_001025077 NM_001025081 NM_001025090 NM_001025092 NM_001025094 NM_001025096 NM_001025097 NM_001025098 NM_001025100 NM_001025101 NM_001025107 NM_001025233 NM_001065 NM_001074 NM_001111 NM_001128 NM_001144 NM_001199 NM_001204 NM_001222 NM_001232 NM_001295 NM_001305 NM_001326 NM_001329 NM_001338 NM_001389 NM_001390 NM_001396 NM_001401 NM_001412 NM_001419 NM_001421 NM_001430 NM_001432 NM_001449 NM_001452 NM_001567 NM_001610 NM_001650 NM_001706 NM_001709 NM_001713 NM_001718 NM_001737 NM_001759 NM_001773 NM_001775 NM_001829 NM_001901 NM_001980 NM_002026 NM_002109 NM_002147 NM_002166 NM_002170 NM_002187 NM_002210 NM_002228 NM_002249 NM_002254 NM_002264 NM_002283 NM_002312 NM_002318 NM_002355 NM_002357 NM_002385 NM_002460 NM_002501 NM_002505 NM_002552 NM_002581 NM_002606 NM_002613 NM_002655 NM_002657 NM_002697 NM_002699 NM_002709 NM_002725 NM_002744 NM_002745 NM_002810 NM_002813 NM_002816 NM_002843 NM_002861 NM_002869 NM_002874 NM_002928 NM_002936 NM_002959 NM_003003 NM_003012 NM_003078 NM_003101 NM_003102 NM_003114 NM_003150 NM_003165 NM_003179 NM_003188 NM_003215 NM_003246 NM_003262 NM_003274 NM_003277 NM_003288 NM_003352 NM_003369 NM_003379 NM_003382 NM_003391 NM_003392 NM_003439 NM_003450 NM_003455 NM_003575 NM_003576 NM_003602 NM_003605 NM_003612 NM_003651 NM_003657 NM_003660 NM_003661 NM_003680 NM_003684 NM_003713 NM_003714 NM_003720 NM_003768 NM_003789 NM_003792 NM_003799 NM_003833 NM_003873 NM_003874 NM_003882 NM_003887 NM_003936 NM_003941 NM_003950 NM_003955 NM_004028 NM_004092 NM_004093 NM_004165 NM_004171 NM_004176 NM_004220 NM_004223 NM_004254 NM_004293 NM_004302 NM_004304 NM_004320 NM_004321 NM_004322 NM_004329 NM_004338 NM_004442 NM_004473 NM_004487 NM_004499 NM_004504 NM_004518 NM_004520 NM_004565 NM_004583 NM_004588 NM_004606 NM_004612 NM_004615 NM_004630 NM_004642 NM_004663 NM_004707 NM_004708 NM_004710 NM_004805 NM_004840 NM_004863 NM_004918 NM_004962 NM_004973 NM_005026 NM_005046 NM_005053 NM_005063 NM_005069 NM_005077 NM_005093 NM_005095 NM_005098 NM_005102 NM_005139 NM_005141 NM_005147 NM_005180 NM_005185 NM_005197 NM_005202 NM_005233 NM_005254 NM_005311 NM_005316 NM_005343 NM_005370 NM_005399 NM_005434 NM_005455 NM_005458 NM_005465 NM_005477 NM_005479 NM_005520 NM_005637 NM_005643 NM_005644 NM_005725 NM_005737 NM_005752 NM_005779 NM_005806 NM_005841 NM_005895 NM_005902 NM_005908 NM_005964 NM_006047 NM_006048 NM_006066 NM_006073 NM_006091 NM_006095 NM_006128 NM_006141 NM_006162 NM_006187 NM_006191 NM_006278 NM_006282 NM_006315 NM_006353 NM_006361 NM_006374 NM_006375 NM_006390 NM_006393 NM_006449 NM_006457 NM_006534 NM_006546 NM_006549 NM_006553 NM_006557 NM_006561 NM_006563 NM_006570 NM_006596 NM_006598 NM_006609 NM_006626 NM_006658 NM_006660 NM_006671 NM_006673 NM_006697 NM_006707 NM_006708 NM_006783 NM_006811 NM_006812 NM_006848 NM_006854 NM_006876 NM_006889 NM_006925 NM_006955 NM_006984 NM_007006 NM_007014 NM_007030 NM_007073 NM_007125 NM_007236 NM_007245 NM_007249 NM_007250 NM_007270 NM_007271 NM_007306 NM_007318 NM_007335 NM_007336 NM_007338 NM_007353 NM_007375 NM_012074 NM_012137 NM_012208 NM_012242 NM_012261 NM_012282 NM_012296 NM_012384 NM_012398 NM_012408 NM_012424 NM_012446 NM_012479 NM_013235 NM_013239 NM_013243 NM_013252 NM_013291 NM_013293 NM_013390 NM_013989 NM_014023 NM_014069 NM_014077 NM_014112 NM_014153 NM_014157 NM_014177 NM_014183 NM_014235 NM_014252 NM_014289 NM_014309 NM_014321 NM_014323 NM_014338 NM_014353 NM_014363 NM_014368 NM_014397 NM_014421 NM_014426 NM_014448 NM_014468 NM_014504 NM_014553 NM_014556 NM_014587 NM_014601 NM_014607 NM_014613 NM_014632 NM_014657 NM_014674 NM_014682 NM_014707 NM_014719 NM_014724 NM_014731 NM_014732 NM_014743 NM_014759 NM_014762 NM_014770 NM_014772 NM_014792 NM_014801 NM_014804 NM_014812 NM_014821 NM_014835 NM_014836 NM_014850 NM_014851 NM_014902 NM_014914 NM_014957 NM_014984 NM_014997 NM_015002 NM_015003 NM_015020 NM_015033 NM_015059 NM_015080 NM_015088 NM_015111 NM_015144 NM_015155 NM_015157 NM_015161 NM_015187 NM_015206 NM_015245 NM_015265 NM_015267 NM_015278 NM_015286 NM_015299 NM_015310 NM_015328 NM_015335 NM_015347 NM_015355 NM_015359 NM_015381 NM_015385 NM_015433 NM_015447 NM_015457 NM_015525 NM_015564 NM_015657 NM_015686 NM_015691 NM_015840 NM_015841 NM_015878 NM_015879 NM_015894 NM_015898 NM_015956 NM_015965 NM_015984 NM_015995 NM_016018 NM_016026 NM_016041 NM_016114 NM_016131 NM_016141 NM_016143 NM_016173 NM_016196 NM_016199 NM_016206 NM_016221 NM_016272 NM_016337 NM_016391 NM_016412 NM_016426 NM_016436 NM_016441 NM_016442 NM_016491 NM_016524 NM_016538 NM_016544 NM_016570 NM_016641 NM_016654 NM_016930 NM_016940 NM_017410 NM_017418 NM_017523 NM_017540 NM_017554 NM_017575 NM_017583 NM_017615 NM_017628 NM_017637 NM_017664 NM_017671 NM_017680 NM_017729 NM_017736 NM_017740 NM_017750 NM_017793 NM_017841 NM_017857 NM_017881 NM_017896 NM_017922 NM_017925 NM_017929 NM_017943 NM_017948 NM_017953 NM_017974 NM_018008 NM_018066 NM_018082 NM_018089 NM_018090 NM_018108 NM_018127 NM_018182 NM_018195 NM_018210 NM_018212 NM_018214 NM_018238 NM_018242 NM_018243 NM_018276 NM_018277 NM_018280 NM_018303 NM_018370 NM_018381 NM_018423 NM_018425 NM_018450 NM_018476 NM_018579 NM_018590 NM_018660 NM_018671 NM_018695 NM_018717 NM_018839 NM_018960 NM_018977 NM_018983 NM_019007 NM_019092 NM_019555 NM_019557 NM_019605 NM_019610 NM_020133 NM_020144 NM_020150 NM_020184 NM_020190 NM_020208 NM_020237 NM_020362 NM_020390 NM_020405 NM_020433 NM_020444 NM_020453 NM_020643 NM_020654 NM_020655 NM_020699 NM_020739 NM_020755 NM_020770 NM_020771 NM_020776 NM_020781 NM_020794 NM_020803 NM_020830 NM_020856 NM_020894 NM_020895 NM_020909 NM_020914 NM_020925 NM_020933 NM_021083 NM_021093 NM_021106 NM_021111 NM_021127 NM_021174 NM_021215 NM_021220 NM_021230 NM_021248 NM_021638 NM_021705 NM_021823 NM_021935 NM_021942 NM_021943 NM_021957 NM_021960 NM_021961 NM_021967 NM_022062 NM_022068 NM_022073 NM_022078 NM_022114 NM_022137 NM_022150 NM_022171 NM_022308 NM_022405 NM_022469 NM_022552 NM_022754 NM_022779 NM_022780 NM_022802 NM_022818 NM_022898 NM_022978 NM_023079 NM_024117 NM_024298 NM_024311 NM_024420 NM_024490 NM_024512 NM_024527 NM_024592 NM_024624 NM_024629 NM_024630 NM_024667 NM_024701 NM_024725 NM_024761 NM_024766 NM_024769 NM_024795 NM_024832 NM_024834 NM_024859 NM_024886 NM_024887 NM_024891 NM_024986 NM_024997 NM_025078 NM_025084 NM_025164 NM_025203 NM_025219 NM_025224 NM_025236 NM_025240 NM_030590 NM_030592 NM_030643 NM_030651 NM_030661 NM_030780 NM_030787 NM_030803 NM_030805 NM_030891 NM_030915 NM_030943 NM_030958 NM_031213 NM_031266 NM_031268 NM_031281 NM_031418 NM_031453 NM_031460 NM_031469 NM_031483 NM_031910 NM_031912 NM_031921 NM_031940 NM_032017 NM_032019 NM_032025 NM_032037 NM_032038 NM_032050 NM_032052 NM_032138 NM_032144 NM_032182 NM_032217 NM_032236 NM_032246 NM_032280 NM_032288 NM_032294 NM_032296 NM_032307 NM_032335 NM_032354 NM_032385 NM_032435 NM_032442 NM_032536 NM_032554 NM_032569 NM_032575 NM_032599 NM_032682 NM_032801 NM_032810 NM_032814 NM_032826 NM_032837 NM_032853 NM_032868 NM_032871 NM_032895 NM_032900 NM_032902 NM_032974 NM_032975 NM_032980 NM_032989 NM_032993 NM_033025 NM_033089 NM_033111 NM_033261 NM_033274 NM_033318 NM_033331 NM_033346 NM_033397 NM_033409 NM_033512 NM_033624 NM_033656 NM_052846 NM_052847 NM_052849 NM_052905 NM_052906 NM_052919 NM_052949 NM_052954 NM_052965 NM_052978 NM_057159 NM_058167 NM_058175 NM_058237 NM_078473 NM_079834 NM_080415 NM_080417 NM_080491 NM_080679 NM_080680 NM_080681 NM_080818 NM_080872 NM_080878 NM_101395 NM_130436 NM_130437 NM_130438 NM_130468 NM_130759 NM_130760 NM_130761 NM_130762 NM_130795 NM_130807 NM_130830 NM_133171 NM_133180 NM_133334 NM_133445 NM_133477 NM_133489 NM_133510 NM_133646 NM_134264 NM_134427 NM_138278 NM_138279 NM_138316 NM_138322 NM_138338 NM_138350 NM_138357 NM_138369 NM_138399 NM_138415 NM_138426 NM_138572 NM_138576 NM_138715 NM_138716 NM_138732 NM_138734 NM_138793 NM_138923 NM_138931 NM_138958 NM_139028 NM_139126 NM_139201 NM_139204 NM_139276 NM_139277 NM_139319 NM_139321 NM_144488 NM_144489 NM_144498 NM_144576 NM_144604 NM_144607 NM_144628 NM_144648 NM_144662 NM_144688 NM_144692 NM_144778 NM_144991 NM_144995 NM_145013 NM_145015 NM_145018 NM_145044 NM_145068 NM_145173 NM_145179 NM_145185 NM_145206 NM_145231 NM_145298 NM_145331 NM_145332 NM_145333 NM_145343 NM_145344 NM_145646 NM_145652 NM_145654 NM_145660 NM_145714 NM_145728 NM_145756 NM_145794 NM_145795 NM_146387 NM_146388 NM_147147 NM_147152 NM_148174 NM_148414 NM_148415 NM_148416 NM_148894 NM_148960 NM_148977 NM_148978 NM_152222 NM_152227 NM_152272 NM_152380 NM_152422 NM_152510 NM_152603 NM_152624 NM_152636 NM_152689 NM_152745 NM_152754 NM_152777 NM_152785 NM_152831 NM_152838 NM_152857 NM_152858 NM_152939 NM_153008 NM_153020 NM_153025 NM_153029 NM_153033 NM_153211 NM_153214 NM_153231 NM_153238 NM_153239 NM_153251 NM_153254 NM_153264 NM_153274 NM_153326 NM_153342 NM_153360 NM_153371 NM_153425 NM_153442 NM_153443 NM_153447 NM_153450 NM_153499 NM_153500 NM_153608 NM_153620 NM_153631 NM_153632 NM_153634 NM_153683 NM_153714 NM_153717 NM_153746 NM_153759 NM_153810 NM_153822 NM_170686 NM_170731 NM_170732 NM_170733 NM_170734 NM_170735 NM_170768 NM_170769 NM_170770 NM_170781 NM_170782 NM_172169 NM_172170 NM_172171 NM_172172 NM_172173 NM_172206 NM_172216 NM_172218 NM_172226 NM_172387 NM_172388 NM_172389 NM_173076 NM_173201 NM_173354 NM_173463 NM_173470 NM_173551 NM_173556 NM_173560 NM_173643 NM_173658 NM_173661 NM_173667 NM_173673 NM_173689 NM_173847 NM_174871 NM_175629 NM_175736 NM_175745 NM_175862 NM_175864 NM_175898 NM_175901 NM_175907 NM_175923 NM_176795 NM_176815 NM_176823 NM_177414 NM_177424 NM_177442 NM_177550 NM_177953 NM_177995 NM_177999 NM_178129 NM_178448 NM_178516 NM_178526 NM_178544 NM_178557 NM_178568 NM_178569 NM_178838 NM_180991 NM_181041 NM_181076 NM_181077 NM_181336 NM_181359 NM_181481 NM_181482 NM_181483 NM_181552 NM_181659 NM_181672 NM_181673 NM_181724 NM_181741 NM_181742 NM_181846 NM_182314 NM_182483 NM_182486 NM_182511 NM_182533 NM_182586 NM_182612 NM_182763 NM_182764 NM_182827 NM_182848 NM_182904 NM_182920 NM_182971 NM_183006 NM_183047 NM_183048 NM_183065 NM_183372 NM_194071 NM_194252 NM_194281 NM_194283 NM_194286 NM_194290 NM_194299 NM_194315 NM_194316 NM_194324 NM_194356 NM_194457 NM_194458 NM_197975 NM_198181 NM_198183 NM_198225 NM_198287 NM_198321 NM_198401 NM_198441 NM_198472 NM_198502 NM_198530 NM_198554 NM_198582 NM_198595 NM_198686 NM_198889 NM_198890 NM_198896 NM_198900 NM_198947 NM_198993 NM_199001 NM_199050 NM_199053 NM_199139 NM_199141 NM_199160 NM_199163 NM_199176 NM_199205 NM_199206 NM_199242 NM_199326 NM_199327 NM_199359 NM_199360 NM_199361 NM_199362 NM_199363 NM_199420 NM_199424 NM_199451 NM_199452 NM_199454 NM_199464 NM_201348 NM_201434 NM_201995 NM_201998 NM_203306 NM_203394 NM_203426 NM_203433 NM_203451 NM_203481 NM_205857 NM_205861 NM_205864 NM_206841 NM_206876 NM_206877 NM_206887 NM_206902 NM_206910 NM_206911 NM_206914 NM_206937 NM_207313 NM_207371 NM_207378 NM_207380 NM_207383 NM_207405 NM_207438 NM_207453 NM_207465 NM_207497 NM_207500 NM_207505 NM_207506 NM_207514 NM_212474 NM_212475 NM_212476 NM_212478 NM_212481 NM_212482 NM_213568 NM_213662 XM_032278 XM_032945 XM_032996 XM_039721 XM_045911 XM_049237 XM_056455 XM_087353 XM_172874 XM_173160 XM_208545 XM_209163 XM_209363 XM_209824 XM_210048 XM_211367 XM_290342 XM_290540 XM_290811 XM_292160 XM_294743 XM_294765 XM_297816 XM_350880 XM_351948 XM_370837 XM_370843 XM_370899 XM_371074 XM_371204 XM_371286 XM_371311 XM_371461 XM_371486 XM_371777 XM_371820 XM_372420 XM_372556 XM_372716 XM_373474 XM_373500 XM_373513 XM_373588 XM_374108 XM_374141 XM_374152 XM_374343 XM_374399 XM_374766 XM_374767 XM_375152 XM_375275 XM_375629 XM_375729 XM_375928 XM_376051 XM_376062 XM_376558 XM_377002 XM_377073 XM_378236 XM_378301 XM_378327 XM_378350 XM_378358 XM_378421 XM_378456 XM_378473 XM_378620 XM_378642 XM_378660 XM_378667 XM_378678 XM_378758 XM_378822 XM_378824 XM_378861 XM_378876 XM_378883 XM_378908 XM_378946 XM_378957 XM_379065 XM_379075 XM_379141 XM_379327 XM_379381 XM_379474 XM_379508 XM_379520 XM_379597 XM_379692 XM_379730 XM_380089 XM_380103 XM_380129 XM_380146 XM_495902 XM_495961 XM_496036 XM_496081 XM_496088 XM_496103 XM_496134 XM_496335 XM_496690 XM_496749 XM_496943 XM_497002 XM_498440 XM_498478 XM_498614 XM_498620 XM_498629 XM_498636 XM_498649 XM_498662 XM_498673 XM_498814 XM_498882 XM_498907 XM_498925 XM_498946 XM_498998 XM_499008 XM_499023 XM_499035 XM_499038 XM_499057 XM_499067 XM_499084 XM_499106 XM_499160 XM_499170 XM_499362 XM_499502 XM_499505 XM_499517 XM_499539 XM_499570 XR_000268	Genes with multiple seed matches: NM_000849 NM_001010897 NM_001012420 NM_001012651 NM_001012733 NM_001012734 NM_001013695 NM_001023565 NM_001718 NM_001759 NM_001980 NM_002249 NM_002254 NM_003188 NM_003612 NM_004093 NM_005197 NM_005233 NM_005254 NM_005343 NM_006534 NM_006549 NM_007236 NM_012208 NM_013252 NM_014235 NM_014363 NM_014587 NM_014732 NM_015033 NM_015111 NM_016114 NM_016654 NM_017540 NM_018303 NM_018590 NM_018977 NM_020133 NM_020699 NM_020739 NM_020925 NM_020933 NM_021174 NM_022780 NM_025219 NM_031910 NM_032144 NM_032246 NM_032294 NM_032837 NM_032900 NM_134264 NM_144692 NM_145179 NM_145331 NM_145332 NM_145333 NM_152636 NM_153499 NM_153500 NM_170781 NM_170782 NM_172206 NM_172216 NM_172226 NM_173556 NM_175736 NM_175901 NM_176795 NM_178544 NM_181659 NM_182486 NM_194071 NM_194356 NM_198321 NM_198554 NM_198900 NM_199050 NM_199205 NM_203306 NM_205857 XM_370843 XM_375629 XM_376558 XM_496943

For Details about the algorithm please see
"3' UTR seed matches, but not overall identity, are associated with RNAi off-targets" ,Nature Methods - 3, 199 - 204 (2006)

VIRsiRNAdb

Database of Viral siRNA / shRNA