VIRsiRNAdb

Predicted off-targets seeds for siRNA "ucaccugccagucaaacga" Using siRNA Seed Locator Algorithm

siRNA Seed Locator
Total Genes with at least one seed match :1253.
Total Genes with multiple seed matches: 72.
Genes with at least one seed match: NM_000021 NM_000044 NM_000050 NM_000079 NM_000116 NM_000138 NM_000246 NM_000268 NM_000286 NM_000301 NM_000337 NM_000351 NM_000405 NM_000448 NM_000450 NM_000452 NM_000503 NM_000522 NM_000554 NM_000565 NM_000594 NM_000621 NM_000623 NM_000629 NM_000633 NM_000647 NM_000664 NM_000705 NM_000719 NM_000721 NM_000726 NM_000793 NM_000838 NM_000843 NM_000864 NM_000870 NM_000896 NM_000902 NM_000933 NM_000958 NM_000963 NM_000964 NM_000991 NM_000998 NM_001001331 NM_001001343 NM_001001411 NM_001001524 NM_001001685 NM_001001704 NM_001001707 NM_001001890 NM_001003399 NM_001003406 NM_001003789 NM_001003891 NM_001003895 NM_001004305 NM_001004322 NM_001004441 NM_001005388 NM_001005473 NM_001005502 NM_001005746 NM_001005747 NM_001006605 NM_001006633 NM_001006636 NM_001006639 NM_001006640 NM_001006666 NM_001007023 NM_001007224 NM_001007225 NM_001007237 NM_001007546 NM_001008544 NM_001008658 NM_001008710 NM_001008711 NM_001008801 NM_001009554 NM_001009611 NM_001009820 NM_001009992 NM_001010890 NM_001010903 NM_001010911 NM_001010915 NM_001011645 NM_001011649 NM_001012714 NM_001012957 NM_001013407 NM_001013442 NM_001013677 NM_001013678 NM_001013682 NM_001013707 NM_001013710 NM_001013721 NM_001013725 NM_001014279 NM_001015045 NM_001017392 NM_001017408 NM_001017440 NM_001017523 NM_001017989 NM_001017995 NM_001018050 NM_001018051 NM_001018052 NM_001018053 NM_001018058 NM_001018064 NM_001018065 NM_001018066 NM_001018067 NM_001018068 NM_001018069 NM_001018072 NM_001018097 NM_001023565 NM_001024226 NM_001024227 NM_001024228 NM_001024732 NM_001024808 NM_001024809 NM_001024843 NM_001024858 NM_001025 NM_001025076 NM_001025077 NM_001025081 NM_001025090 NM_001025092 NM_001025094 NM_001025098 NM_001025100 NM_001025101 NM_001031 NM_001066 NM_001082 NM_001116 NM_001167 NM_001177 NM_001224 NM_001225 NM_001230 NM_001239 NM_001259 NM_001290 NM_001333 NM_001386 NM_001387 NM_001390 NM_001419 NM_001424 NM_001457 NM_001523 NM_001542 NM_001556 NM_001620 NM_001650 NM_001658 NM_001678 NM_001683 NM_001693 NM_001704 NM_001720 NM_001730 NM_001754 NM_001793 NM_001801 NM_001858 NM_001874 NM_001886 NM_001896 NM_001936 NM_001937 NM_001951 NM_001961 NM_001974 NM_002002 NM_002015 NM_002033 NM_002052 NM_002074 NM_002112 NM_002163 NM_002170 NM_002204 NM_002242 NM_002357 NM_002359 NM_002373 NM_002385 NM_002416 NM_002501 NM_002524 NM_002531 NM_002535 NM_002581 NM_002582 NM_002595 NM_002612 NM_002641 NM_002648 NM_002666 NM_002670 NM_002695 NM_002702 NM_002725 NM_002731 NM_002736 NM_002737 NM_002775 NM_002814 NM_002828 NM_002858 NM_002866 NM_002871 NM_002879 NM_002886 NM_002901 NM_002902 NM_002912 NM_002931 NM_002938 NM_003006 NM_003030 NM_003036 NM_003051 NM_003076 NM_003103 NM_003106 NM_003107 NM_003108 NM_003147 NM_003155 NM_003178 NM_003190 NM_003200 NM_003222 NM_003240 NM_003241 NM_003245 NM_003247 NM_003281 NM_003319 NM_003342 NM_003388 NM_003392 NM_003441 NM_003445 NM_003486 NM_003490 NM_003498 NM_003559 NM_003605 NM_003607 NM_003617 NM_003629 NM_003636 NM_003644 NM_003648 NM_003660 NM_003714 NM_003722 NM_003742 NM_003749 NM_003783 NM_003799 NM_003800 NM_003817 NM_003834 NM_003836 NM_003840 NM_003852 NM_003873 NM_003888 NM_003965 NM_004028 NM_004054 NM_004128 NM_004161 NM_004209 NM_004227 NM_004234 NM_004235 NM_004237 NM_004262 NM_004263 NM_004267 NM_004282 NM_004293 NM_004296 NM_004368 NM_004394 NM_004399 NM_004405 NM_004437 NM_004442 NM_004473 NM_004503 NM_004507 NM_004559 NM_004614 NM_004657 NM_004660 NM_004680 NM_004687 NM_004697 NM_004716 NM_004722 NM_004737 NM_004776 NM_004780 NM_004794 NM_004801 NM_004824 NM_004859 NM_004911 NM_004936 NM_004937 NM_004995 NM_005027 NM_005088 NM_005093 NM_005146 NM_005157 NM_005170 NM_005197 NM_005206 NM_005245 NM_005253 NM_005284 NM_005336 NM_005354 NM_005373 NM_005399 NM_005413 NM_005434 NM_005465 NM_005479 NM_005494 NM_005501 NM_005526 NM_005561 NM_005577 NM_005635 NM_005636 NM_005638 NM_005647 NM_005729 NM_005766 NM_005780 NM_005786 NM_005789 NM_005816 NM_005889 NM_005892 NM_005920 NM_006048 NM_006060 NM_006065 NM_006096 NM_006106 NM_006154 NM_006176 NM_006180 NM_006203 NM_006214 NM_006237 NM_006241 NM_006257 NM_006361 NM_006413 NM_006416 NM_006439 NM_006471 NM_006475 NM_006481 NM_006487 NM_006524 NM_006548 NM_006553 NM_006561 NM_006564 NM_006572 NM_006611 NM_006612 NM_006635 NM_006698 NM_006710 NM_006725 NM_006791 NM_006867 NM_006884 NM_006943 NM_007006 NM_007081 NM_007177 NM_007185 NM_007187 NM_007190 NM_007197 NM_007249 NM_007286 NM_007287 NM_007288 NM_007289 NM_007306 NM_007313 NM_007318 NM_007363 NM_009586 NM_012081 NM_012172 NM_012189 NM_012218 NM_012229 NM_012231 NM_012252 NM_012329 NM_012331 NM_012338 NM_012392 NM_012395 NM_012412 NM_012463 NM_013276 NM_013283 NM_013286 NM_013302 NM_013372 NM_013381 NM_013412 NM_013433 NM_013989 NM_014002 NM_014010 NM_014141 NM_014191 NM_014220 NM_014226 NM_014242 NM_014267 NM_014372 NM_014391 NM_014410 NM_014417 NM_014459 NM_014488 NM_014504 NM_014548 NM_014556 NM_014613 NM_014657 NM_014682 NM_014704 NM_014732 NM_014743 NM_014747 NM_014757 NM_014805 NM_014826 NM_014844 NM_014850 NM_014854 NM_014860 NM_014873 NM_014880 NM_014883 NM_014902 NM_014914 NM_014943 NM_014996 NM_014997 NM_015056 NM_015071 NM_015074 NM_015079 NM_015082 NM_015088 NM_015090 NM_015092 NM_015111 NM_015113 NM_015115 NM_015116 NM_015127 NM_015155 NM_015191 NM_015202 NM_015205 NM_015225 NM_015233 NM_015274 NM_015282 NM_015288 NM_015310 NM_015338 NM_015347 NM_015349 NM_015367 NM_015385 NM_015553 NM_015558 NM_015570 NM_015640 NM_015658 NM_015879 NM_015889 NM_015898 NM_015905 NM_015980 NM_015981 NM_015984 NM_016011 NM_016019 NM_016048 NM_016060 NM_016090 NM_016103 NM_016138 NM_016156 NM_016284 NM_016297 NM_016308 NM_016399 NM_016418 NM_016442 NM_016463 NM_016522 NM_016548 NM_016590 NM_016623 NM_016929 NM_017413 NM_017415 NM_017423 NM_017514 NM_017551 NM_017583 NM_017617 NM_017628 NM_017645 NM_017670 NM_017694 NM_017697 NM_017740 NM_017749 NM_017760 NM_017774 NM_017805 NM_017822 NM_017850 NM_017888 NM_017911 NM_017938 NM_017968 NM_017990 NM_018019 NM_018023 NM_018040 NM_018075 NM_018121 NM_018181 NM_018198 NM_018231 NM_018249 NM_018260 NM_018273 NM_018295 NM_018312 NM_018322 NM_018385 NM_018388 NM_018440 NM_018534 NM_018662 NM_018715 NM_018836 NM_018945 NM_018951 NM_018990 NM_019006 NM_019032 NM_020066 NM_020123 NM_020131 NM_020139 NM_020178 NM_020199 NM_020340 NM_020390 NM_020399 NM_020416 NM_020418 NM_020453 NM_020472 NM_020473 NM_020638 NM_020647 NM_020689 NM_020742 NM_020754 NM_020761 NM_020762 NM_020770 NM_020789 NM_020802 NM_020830 NM_020844 NM_020858 NM_020909 NM_020919 NM_020933 NM_020959 NM_020972 NM_020993 NM_021014 NM_021015 NM_021020 NM_021025 NM_021073 NM_021096 NM_021153 NM_021156 NM_021161 NM_021192 NM_021252 NM_021570 NM_021620 NM_021627 NM_021638 NM_021643 NM_021813 NM_021931 NM_021966 NM_022074 NM_022114 NM_022131 NM_022143 NM_022150 NM_022162 NM_022662 NM_022740 NM_022749 NM_022761 NM_022768 NM_022788 NM_022818 NM_022900 NM_022916 NM_023109 NM_024033 NM_024069 NM_024087 NM_024295 NM_024310 NM_024590 NM_024612 NM_024614 NM_024629 NM_024633 NM_024659 NM_024663 NM_024677 NM_024705 NM_024711 NM_024719 NM_024721 NM_024733 NM_024808 NM_024866 NM_024869 NM_024887 NM_024948 NM_025083 NM_025161 NM_025214 NM_025232 NM_025243 NM_025250 NM_030643 NM_030651 NM_030653 NM_030655 NM_030661 NM_030760 NM_030762 NM_030766 NM_030811 NM_030915 NM_030918 NM_030945 NM_030959 NM_030964 NM_031448 NM_031449 NM_031460 NM_031468 NM_031471 NM_031476 NM_031897 NM_031954 NM_032019 NM_032119 NM_032131 NM_032189 NM_032195 NM_032236 NM_032268 NM_032283 NM_032358 NM_032374 NM_032382 NM_032421 NM_032449 NM_032479 NM_032501 NM_032515 NM_032552 NM_032579 NM_032711 NM_032753 NM_032780 NM_032782 NM_032809 NM_032854 NM_032900 NM_032910 NM_032959 NM_032975 NM_032976 NM_032977 NM_032980 NM_032983 NM_032984 NM_033008 NM_033009 NM_033010 NM_033106 NM_033128 NM_033136 NM_033137 NM_033143 NM_033260 NM_033306 NM_033307 NM_033357 NM_033426 NM_033439 NM_033515 NM_052862 NM_052957 NM_052978 NM_052996 NM_053044 NM_053064 NM_053276 NM_054012 NM_054016 NM_054027 NM_058183 NM_058189 NM_078487 NM_080758 NM_080836 NM_130466 NM_130797 NM_130901 NM_133378 NM_133432 NM_133437 NM_133459 NM_133460 NM_133464 NM_133476 NM_133632 NM_133633 NM_133642 NM_134422 NM_134423 NM_134424 NM_138317 NM_138318 NM_138338 NM_138370 NM_138440 NM_138444 NM_138462 NM_138568 NM_138722 NM_138723 NM_138735 NM_138773 NM_138788 NM_138806 NM_138925 NM_138926 NM_138927 NM_138958 NM_139071 NM_139214 NM_139245 NM_139279 NM_144599 NM_144617 NM_144621 NM_144654 NM_144671 NM_145250 NM_145251 NM_145284 NM_145308 NM_145646 NM_145660 NM_145698 NM_145805 NM_145814 NM_145815 NM_147129 NM_147194 NM_152257 NM_152261 NM_152280 NM_152287 NM_152322 NM_152333 NM_152344 NM_152390 NM_152395 NM_152411 NM_152414 NM_152439 NM_152442 NM_152466 NM_152490 NM_152520 NM_152527 NM_152531 NM_152557 NM_152609 NM_152613 NM_152630 NM_152679 NM_152684 NM_152690 NM_152693 NM_152699 NM_152745 NM_152760 NM_152879 NM_152945 NM_153032 NM_153045 NM_153191 NM_153211 NM_153237 NM_153343 NM_153355 NM_153365 NM_153442 NM_153456 NM_153616 NM_153617 NM_153618 NM_153619 NM_153631 NM_153632 NM_153639 NM_153693 NM_153715 NM_153768 NM_170696 NM_170697 NM_170707 NM_170708 NM_170721 NM_170744 NM_170750 NM_170751 NM_170752 NM_170780 NM_171825 NM_172058 NM_172059 NM_172060 NM_172127 NM_172128 NM_172130 NM_172239 NM_172345 NM_172367 NM_173079 NM_173357 NM_173358 NM_173463 NM_173532 NM_173551 NM_173580 NM_173602 NM_173625 NM_173661 NM_173687 NM_173795 NM_173800 NM_173803 NM_173808 NM_173855 NM_174921 NM_174929 NM_174936 NM_174962 NM_175078 NM_175698 NM_175723 NM_175729 NM_175864 NM_175907 NM_175921 NM_176863 NM_176876 NM_177402 NM_177454 NM_177937 NM_178120 NM_178126 NM_178135 NM_178314 NM_178443 NM_178520 NM_178526 NM_178536 NM_178812 NM_178836 NM_178839 NM_181041 NM_181311 NM_181312 NM_181313 NM_181314 NM_181332 NM_181355 NM_181359 NM_181435 NM_181489 NM_181503 NM_181655 NM_181656 NM_181701 NM_181776 NM_181826 NM_181827 NM_181828 NM_181829 NM_181830 NM_181832 NM_181833 NM_181834 NM_181835 NM_181876 NM_182500 NM_182501 NM_182525 NM_182532 NM_182534 NM_182580 NM_182626 NM_182682 NM_182686 NM_182700 NM_182752 NM_182775 NM_182796 NM_182797 NM_182831 NM_182925 NM_182948 NM_183006 NM_183337 NM_183373 NM_183414 NM_183415 NM_183416 NM_194310 NM_194317 NM_198074 NM_198089 NM_198186 NM_198187 NM_198189 NM_198196 NM_198320 NM_198400 NM_198461 NM_198462 NM_198595 NM_198834 NM_198835 NM_198836 NM_198837 NM_198838 NM_198839 NM_198844 NM_198847 NM_198859 NM_198935 NM_198956 NM_198989 NM_199132 NM_199133 NM_199167 NM_199321 NM_199367 NM_199454 NM_201267 NM_201277 NM_201278 NM_201281 NM_201348 NM_201432 NM_201433 NM_201436 NM_201516 NM_201517 NM_201548 NM_203282 NM_203293 NM_203294 NM_203295 NM_203296 NM_203297 NM_203342 NM_203343 NM_203346 NM_203394 NM_203446 NM_203453 NM_203510 NM_205861 NM_206839 NM_207009 NM_207345 NM_207371 NM_207394 NM_207404 NM_207432 NM_207438 NM_207444 NM_207461 NM_207469 NM_207478 NM_207491 NM_207504 NM_207509 NM_207577 NM_212552 NM_213598 NM_213604 NM_213723 XM_027236 XM_031553 XM_034872 XM_036936 XM_036942 XM_037523 XM_038436 XM_039393 XM_039676 XM_042936 XM_047995 XM_048898 XM_049237 XM_055866 XM_056455 XM_087137 XM_087353 XM_096317 XM_097977 XM_113228 XM_166132 XM_211287 XM_290546 XM_290737 XM_290842 XM_291625 XM_294521 XM_295213 XM_297816 XM_370654 XM_370665 XM_370899 XM_371116 XM_371354 XM_371423 XM_371429 XM_372019 XM_372118 XM_372267 XM_373513 XM_373566 XM_373578 XM_373692 XM_373881 XM_373958 XM_373973 XM_374003 XM_374013 XM_374343 XM_374917 XM_374973 XM_375007 XM_375029 XM_375185 XM_375443 XM_375558 XM_375697 XM_375929 XM_376254 XM_376558 XM_376560 XM_376680 XM_376784 XM_377476 XM_377742 XM_378238 XM_378250 XM_378321 XM_378358 XM_378368 XM_378389 XM_378394 XM_378399 XM_378573 XM_378606 XM_378608 XM_378620 XM_378684 XM_378692 XM_378700 XM_378742 XM_378758 XM_378777 XM_378914 XM_378946 XM_378971 XM_379029 XM_379075 XM_379189 XM_379243 XM_379276 XM_379298 XM_379452 XM_379456 XM_379535 XM_379547 XM_379573 XM_379635 XM_379651 XM_379920 XM_379927 XM_379934 XM_380160 XM_495796 XM_495844 XM_495886 XM_495909 XM_495939 XM_495950 XM_496341 XM_496343 XM_496449 XM_496664 XM_496704 XM_496826 XM_496836 XM_496862 XM_496907 XM_496981 XM_496982 XM_496983 XM_496984 XM_496985 XM_497012 XM_497056 XM_498434 XM_498474 XM_498478 XM_498544 XM_498563 XM_498588 XM_498646 XM_498671 XM_498751 XM_498757 XM_498758 XM_498760 XM_498761 XM_498765 XM_498766 XM_498767 XM_498768 XM_498769 XM_498770 XM_498771 XM_498772 XM_498773 XM_498774 XM_498777 XM_498778 XM_498779 XM_498780 XM_498781 XM_498782 XM_498783 XM_498784 XM_498785 XM_498786 XM_498789 XM_498801 XM_498802 XM_498804 XM_498817 XM_498828 XM_498835 XM_498883 XM_498954 XM_498992 XM_499008 XM_499047 XM_499051 XM_499056 XM_499068 XM_499084 XM_499147 XM_499343 XM_499496 XM_499502 XM_499503 XM_499519 XM_499539 XM_499563 XM_499602 XR_000261 XR_000266 XR_000268 XR_000292	Genes with multiple seed matches: NM_000522 NM_000554 NM_000623 NM_000664 NM_001001343 NM_001007237 NM_001009992 NM_001010915 NM_001013721 NM_001017392 NM_001017995 NM_001018050 NM_001018051 NM_001018052 NM_001023565 NM_001024858 NM_001025077 NM_001025100 NM_001390 NM_001542 NM_002074 NM_002501 NM_003965 NM_004227 NM_004293 NM_005465 NM_005647 NM_006060 NM_006096 NM_007249 NM_012218 NM_013286 NM_013381 NM_014704 NM_014757 NM_014844 NM_014854 NM_015205 NM_015980 NM_018295 NM_020472 NM_020473 NM_021153 NM_021966 NM_030811 NM_031954 NM_032189 NM_032975 NM_032980 NM_052996 NM_080836 NM_133460 NM_138338 NM_152531 NM_153211 NM_153442 NM_173687 NM_173800 NM_178839 NM_182501 NM_182534 NM_194310 NM_198835 NM_207438 XM_027236 XM_096317 XM_375697 XM_376558 XM_379075 XM_496836 XM_497056 XM_499047

For Details about the algorithm please see
"3' UTR seed matches, but not overall identity, are associated with RNAi off-targets" ,Nature Methods - 3, 199 - 204 (2006)

VIRsiRNAdb

Database of Viral siRNA / shRNA