Predicted Off-targets for siRNA "gcauugaacaugagcagca" Using siRNA SpecificityServer

Specificity Server [Result page v1.0]


SpecificityServer - An siRNA design program for determining siRNA specificity

Automatic recommendation
OK - siRNA is specific for both sense and antisense (guide) strands

39 hits were found for GCAUUGAACAUGAGCAGCA (15 guide strand hits and 24 sense strand hits.)

Hits to Guide strand

AccessionGeneStartEndDetails of mismatchesSpec.
Score
MismatchesContiguousJackson style
specificity
Hits similar
gene
HSP
Score
HSP %
Identity
HSP lengthGene Length
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19
NM_014517 UBP1 1376 1394 cagUUGAACAUGAGCAGaA64 4 14 c false   <90%   4158
NM_020247 CABC1 1304 1322 GugUUGAACAUGAGCAaCA45 3 13 c false   <90%   2932
NM_020768 KCTD16 1752 1770 GaAUcGAACAUGAGCAGCA37 2 14 bc false   <90%   5246
NM_012090 MACF1 11760 11778 cCAUUGAuCAUGAGCAGCu30 3 10 bc false   <90%   17821
NM_033044 MACF1 13192 13210 cCAUUGAuCAUGAGCAGCu30 3 10 bc false   <90%   19271
NM_001080404 LOC729747 293 311 aCAUUGAAgAUGAGCAcCA14 3 7 c false   <90%   1737
XM_001126568 LOC730617 293 311 aCAUUGAAgAUGAGCAcCA14 3 7 c false   <90%   1737
XM_001126500 ZNF440 287 305 aCAUUGAAuAUGAGCAcCA14 3 7 c false   <90%   2833
XM_001131146 ZNF440 693 711 aCAUUGAAuAUGAGCAcCA14 3 7 c false   <90%   3533
NM_001684 ATP2B4 1432 1450 GCAUUGAACAgGAGCAaaA12 3 10 c false   <90%   8733
NM_001001396 ATP2B4 1432 1450 GCAUUGAACAgGAGCAaaA12 3 10 c false   <90%   8911
NM_145041 TMEM106A 2757 2775 aagUUuAACAUGAGCAGCA3 4 13 bc false   <90%   2795
XM_001133074 LOC728772 2759 2777 aagUUuAACAUGAGCAGCA3 4 13 bc false   <90%   3268
XM_001133059 LOC728772 2778 2796 aagUUuAACAUGAGCAGCA3 4 13 bc false   <90%   3287
XM_001133066 LOC728772 3061 3079 aagUUuAACAUGAGCAGCA3 4 13 bc false   <90%   3570


Hits to Sense strand

























AccessionGeneStartEndDetails of mismatchesSpec.
Score
MismatchesContiguousJackson style
specificity
Hits similar
gene
HSP
Score
HSP %
Identity
HSP lengthGene Length
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19
XM_001130075 LAMA1 5437 5455 UGCUGCUCAUGgUCAAUGC66 1 11   false   <90%   9304
NM_005559 LAMA1 5437 5455 UGCUGCUCAUGgUCAAUGC66 1 11   false   <90%   9530
XR_019485 LOC341315 1406 1424 UGCUGCUCAUGUaCAAgGu61 3 12   false   <90%   1838
XR_017616 LOC341315 1406 1424 UGCUGCUCAUGUaCAAgGu61 3 12   false   <90%   1838
NM_198941 SERINC3 474 492 cuCUGCUCAUGUUCAAaGu58 4 14 ac false   <90%   1744
NM_006811 SERINC3 474 492 cuCUGCUCAUGUUCAAaGu58 4 14 ac false   <90%   2592
NM_002616 PER1 3581 3599 gGCUGCUCAUGgcCAAUGC53 3 10   false   <90%   4656
NR_000034 TMEM185B 710 728 UGCUGCUCAUGUUCgAaGu46 3 14 c false   <90%   2131
NM_031993 PCDHGA1 781 799 aGCUGCUCAUGgUaAAUGC44 3 10   false   <90%   2472
NM_018912 PCDHGA1 781 799 aGCUGCUCAUGgUaAAUGC44 3 10   false   <90%   4602
NM_139247 ADCY4 887 905 UGgUGCUCAUGcUCAAUGa41 3 8   false   <90%   3320
NM_006598 SLC12A7 545 563 UGCUGCaCAUGUaCAAUGC23 2 6   false   <90%   5316
NM_003589 CUL4A 1742 1760 UGCUcCUCAUGUUCAAcGa20 3 11 c false   <90%   3735
NM_001008895 CUL4A 1804 1822 UGCUcCUCAUGUUCAAcGa20 3 11 c false   <90%   3797
NM_000023 SGCA 1089 1107 ccCUGCcCAUGUUCAAUGu15 4 11 bc false   <90%   1404
XM_001133708 LOC729738 106 124 UGCUGgUCAUGUUCAAaGC13 2 10 c false   <90%   810
NM_001079872 CUL4B 2525 2543 UGCUGCUaAUGUUuAAUGa13 3 7 c false   <90%   5198
NM_003588 CUL4B 2692 2710 UGCUGCUaAUGUUuAAUGa13 3 7 c false   <90%   5365
NM_001034024 DMAP1 1159 1177 UGgUGCaCAUGUUCAAUGa9 3 11 bc false   <90%   1563
NM_001034023 DMAP1 1199 1217 UGgUGCaCAUGUUCAAUGa9 3 11 bc false   <90%   1603
NM_019100 DMAP1 1380 1398 UGgUGCaCAUGUUCAAUGa9 3 11 bc false   <90%   1784
NM_000350 ABCA4 5568 5586 cGCUGCUCAgGUUCAAcGC-8 3 8 c false   <90%   7326
NM_001014842 TM9SF1 1334 1352 UGCUGggCAUGUUCAAUGu-34 3 11 bc false   <90%   2124
NM_006405 TM9SF1 1334 1352 UGCUGggCAUGUUCAAUGu-34 3 11 bc false   <90%   2449


3 prime UTR Seed matches

Hits to same gene : 0
Hits to other genes : 1534
View matched accessions

3 prime seed match details

AccessionGene nameHits to this gene
NM_016206VGLL34
NM_018225SMU13
NM_001077349ZNF6823
NM_033196ZNF6823
NM_003966SEMA5A3
NM_030806C1orf213
NM_001014797KCNMA13
NM_016395PTPLAD13
XM_001133298LOC7324023
NM_015879ST8SIA33
NM_007011ABHD23
NM_152924ABHD23
NM_0010129943
NM_173354SNF1LK3
NM_018420SLC22A153
NM_014911AAK13
NM_001002254DGAT2L43
NM_017424CECR12
NM_015076CDC2L62
NM_001419ELAVL12
NM_024593EFCAB12
NM_003994KITLG2
NM_000899KITLG2
NM_014864FAM20B2
NM_021912GABRB32
NM_000814GABRB32
NM_001005502CPM2
NM_198320CPM2
NM_001874CPM2
NM_020375C12orf52
NM_031858NBR12
NM_031862NBR12
NM_005899NBR12
XM_001124828LOC7277322
XM_001124651LOC7277322
NM_014089NUPL12
NM_001008564NUPL12
NM_031845MAP22
NM_031847MAP22
NM_001039538MAP22
NM_002374MAP22
NM_000368TSC12
NM_022459XPO42
NM_031419NFKBIZ2
NM_001005474NFKBIZ2
NM_020772NUFIP22
NM_005665EVI52
NM_013230CD242
NM_018427RRN32
NM_020432PHTF22
NM_018246CCDC252
NM_144571CNOT6L2
NM_024577SH3TC22
NM_133374ZNF6182
NM_002760PRKY2
NM_182612PDDC12
NM_012316KPNA62
NM_178566ZDHHC212
NM_006698BLCAP2
NM_001008407BCAP292
NM_198715PTGER32
NM_002336LRP62
XM_001128311LOC7314492
XM_001129750LOC7289992
NM_004522KIF5C2
NM_002033FUT42
NM_001077352RBM232
NM_018107RBM232
NM_001077351RBM232
NM_014686KIAA03552
NM_014442SIGLEC82
NM_152271LONRF12
NM_014518ZNF2292
NM_015359SLC39A142
NM_012097ARL5A2
NM_001037174ARL5A2
NM_177985ARL5A2
NM_001007024GOSR12
NM_001007025GOSR12
NM_004871GOSR12
NM_020440PTGFRN2
NM_002745MAPK12
NM_001001330REEP32
NM_004615TSPAN72
NM_145913SLC5A82
NM_014153ZC3H7A2
NM_032826SLC35B42
NM_001024843TNRC6B2
NM_015088TNRC6B2
NM_0208232
NM_013277RACGAP12
XM_376444LOC1334912
XM_941190LOC1334912
NM_004586RPS6KA32
NM_012081ELL22
NM_001415EIF2S32
NM_014571HEYL2
NM_015525IBTK2
NM_015517MIZF2
NM_198971MIZF2
NM_001083913C10orf262
NM_017787C10orf262
NM_024295DERL12
NM_138959VANGL12
NM_018120ARMC12
NM_000555DCX2
NM_178152DCX2
NM_178153DCX2
NM_178151DCX2
NM_005668ST8SIA42
NM_004438EPHA42
NM_006037HDAC42
NM_001003652SMAD22
NM_005901SMAD22
NM_152263TPM32
NM_006076HRBL2
NM_001001420SMAD52
NM_001001419SMAD52
NM_005903SMAD52
NM_018003UACA1
NM_012213MLYCD1
NM_001008224UACA1
NM_015443KIAA12671
NM_052880PIK3IP11
NM_022340ZFYVE201
NM_019072SGTB1
NM_020205OTUD7B1
NM_005353ITGAD1
NM_005600NIT11
NM_001007559SS181
NM_005637SS181
NM_000351STS1
NM_003852TRIM241
NM_015905TRIM241
NM_178585WDFY31
NM_014991WDFY31
NM_018330KIAA15981
NM_004193GBF11
NM_033544RCCD11
NM_001017919RCCD11
NM_031372HNRPDL1
NM_002401MAP3K31
NM_203351MAP3K31
NM_0011055731
NM_0333901
NM_001080541MGA1
XM_932727MGA1
XM_939296MGA1
XM_944092MGA1
NM_0011055291
NM_006095ATP8A11
NM_006265RAD211
NM_152464C17orf321
NM_017420SIX41
NM_206914FAM119B1
NM_015433FAM119B1
NM_019095CRLS11
NM_001007526RBMY1A11
NM_005058RBMY1A11
NM_001006120RBMY1D1
NM_152585RBMY1F1
NM_001006117RBMY1J1
NM_016586MBIP1
NM_203397LOC2553741
NM_153633HOXC41
NM_014620HOXC41
NM_007187WBP41
NM_144984C10orf721
NM_000390CHM1
NM_198847FAM111A1
NM_022074FAM111A1
NM_014674EDEM11
XM_001126706ZNF6541
NM_018293ZNF6541
NM_000092COL4A41
NM_080546SLC44A11
NM_005941MMP161
XM_001132247C1orf1081
NM_003203C2orf31
XM_001132703FLJ410471
XM_001133280FLJ410471
NM_006775QKI1
NM_001289CLIC21
NM_006380APPBP21
NM_145808MTPN1
NM_015026MON21
NM_001008408RBM331
NM_053043PRR81
NM_001079812DIAPH11
NM_005219DIAPH11
NM_005937MLLT61
NM_175884FLJ360311
NM_194434VAPA1
NM_003574VAPA1
NM_033542SYS11
NM_018000MREG1
NM_173851SLC30A81
NM_0151881
NM_018407LAPTM4B1
NM_032263IQCG1
NM_016277RAB231
NM_183227RAB231
NM_005499SAE21
NM_020873LRRN11
NM_173576MKX1
NM_001025433NQO11
NM_000903NQO11
NM_001025434NQO11
NM_0245621
NM_004094EIF2S11
NM_033225CSMD11
NM_005562LAMC21
NM_001009909LUZP21
NM_020844KIAA14561
NM_0010996771
NM_0010999521
NM_002222ITPR11
NM_178582HM131
NM_022058SLC4A101
NM_001042697ZSWIM71
NM_016626RKHD21
NM_198841FAM120AOS1
NM_032873STS-11
NM_0011005951
NM_182620FAM33A1
NM_0011004251
NM_015314KIAA08951
NM_018167BTBD71
NM_001006121RBMY1B1
NM_001006118RBMY1E1
NM_000782CYP24A11
NM_153226TMEM201
NM_006729DIAPH21
NM_138554TLR41
NM_018639WSB21
NM_002977SCN9A1
NM_015660GIMAP21
NM_001008493ENAH1
NM_018212ENAH1
NM_001007257PRDM21
NM_015866PRDM21
NM_005197CHES11
NM_0010854711
NM_052918SORCS11
NM_001013031SORCS11
NM_001030006AP2B11
NM_001282AP2B11
NM_001040285PAPD51
NM_001040284PAPD51
NM_001975ENO21
NM_004866SCAMP11
NM_000916OXTR1
NM_004975KCNB11
NM_003492TMEM1871
NM_001039396MPEG11
XM_001130020KIAA11471
XM_001130081KIAA11471
NM_001080392KIAA11471
NM_004660DDX3Y1
NM_003246THBS11
NM_173622CDRT41
NM_000902MME1
NM_007289MME1
NM_007288MME1
NM_007287MME1
NM_006317BASP11
XM_001129292MBOAT21
NM_138799MBOAT21
NM_002537OAZ21
NM_0209101
NM_006353HMGN41
NM_173511ALS2CR131
NM_001025108AFF31
NM_002285AFF31
NM_080927DCBLD21
NM_0010986381
NM_133462TTC141
NM_001042601TTC141
NM_001432EREG1
NM_001083620GRIA21
NM_000826GRIA21
NM_001083619GRIA21
NM_153188TNPO11
NM_002270TNPO11
NM_005924MEOX21
NM_022351EFCBP11
NM_002239KCNJ31
NM_000710BDKRB11
NM_033550TP53RK1
NM_173800FLJ906501
NM_004277SLC25A271
NM_030899ZNF3231
NM_145909ZNF3231
NM_182551LYCAT1
NM_001002257LYCAT1
NM_001031617COX191
NM_001003406CACNA1I1
NM_021096CACNA1I1
NM_024807TREML21
NM_005069SIM21
NM_032341DDI21
NM_018945PDE7B1
NM_015393DKFZP564O08231
NM_012308FBXL111
NM_001031804MAF1
NM_014517UBP11
NM_138328RHBDL31
NM_052941GBP41
NM_001442FABP41
NM_005934MLLT11
NM_018085IPO91
NM_000439PCSK11
NM_130385MRVI11
NM_0011001631
NM_0010985791
NM_0011001671
NM_018970GPR851
NM_001009993LOC1300741
NM_017610RNF1111
NM_000277PAH1
NM_005868BET11
NM_003948CDKL21
NM_018394ABHD101
NM_006464TGOLN21
XM_941733LOC6471151
XM_930136LOC6471151
NM_013411AK21
NM_207299PRG-31
NM_017753PRG-31
XM_936833LOC6441961
XM_927389LOC6441961
NM_138318KCNK101
NM_138317KCNK101
NM_021161KCNK101
NM_007136ZNF801
XM_930081KRTAP2-21
XM_001127069KRTAP2-21
XM_498907LOC2849981
XM_944715LOC2849981
NM_178326ATG4B1
NM_013325ATG4B1
XM_001126088LOC7277371
XM_001125996LOC7277371
XM_001126099LOC7277371
XM_001125933LOC7277371
XM_001126076LOC7277371
XM_001126139LOC7277371
NM_033103RHPN21
XM_941026ING51
XM_001126273LOC7277731
NM_032329ING51
NM_002576PAK11
NM_001012959DISC11
NM_015267CUTL21
NM_176815DHFRL11
NM_016144COMMD101
NM_018373SYNJ2BP1
NM_000956PTGER21
NM_183043RNF61
NM_183044RNF61
NM_005977RNF61
NM_017688BSPRY1
NM_020925CACHD11
NM_014398LAMP31
NM_001077484SLC38A11
NM_030674SLC38A11
NM_001001874TPD52L31
NM_004283RAB3D1
NM_022491SUDS31
NM_007078LDB31
NM_001080114LDB31
NM_145017C11orf661
NM_0011055431
NM_024612DHX401
XM_942276DHX401
NM_022824FBXL171
NM_022894PAPOLG1
XM_001129399LOC6423461
XM_928707LOC6423461
XM_925879LOC6423461
XM_925864LOC6423251
XM_001130526LOC7286361
XM_001130555LOC7286361
XM_001130543LOC7286361
XM_001130536LOC7286361
NM_001304CPD1
NM_030966KRTAP1-31
XM_001128885LOC7289511
NM_031866FZD81
NM_001003407ABLIM11
NM_001003408ABLIM11
NM_002313ABLIM11
NM_006720ABLIM11
NM_006390IPO81
NM_025203C2orf441
NM_001001938C9orf471
NM_006618JARID1B1
XM_001131899LOC2839041
NM_139070MAPK91
NM_139068MAPK91
NM_002752MAPK91
NM_139069MAPK91
NM_007137ZNF811
NM_139056ADAMTS161
NM_015352POFUT11
NM_016577RAB6B1
NM_014292CBX61
NM_004614TK21
NM_001037164ARL4A1
NM_005738ARL4A1
NM_212460ARL4A1
NM_015087SPG201
NM_005439MLF21
NM_024942C10orf881
NM_005813PRKD31
NM_173536GABRG11
NM_001110ADAM101
NM_198484ZNF6211
NM_0010984141
NM_000912OPRK11
NM_017645FAM29A1
NM_181443BTBD31
NM_014962BTBD31
NM_003747TNKS1
NM_177403RAB7B1
NM_020673RAB22A1
NM_000633BCL21
NM_031281FCRL51
NM_181425FXN1
NM_000144FXN1
NM_015541LRIG11
NM_198896RAB6A1
NM_002869RAB6A1
NM_014500HTATSF11
NM_001921DCTD1
NM_001012732DCTD1
NM_024667VPS37B1
NM_005596NFIB1
XM_291671RBM201
XM_939337RBM201
NM_198920C6orf1571
NM_0011001591
NM_001014RPS101
XM_938568LOC3888851
XM_373949LOC3888851
NM_003890FCGBP1
XM_001131379FCGBP1
NM_032211LOXL41
NM_153631HOXA31
NM_153632HOXA31
NM_030661HOXA31
NM_006252PRKAA21
NM_016540GPR831
NM_017676ZH2C21
NM_003325HIRA1
NM_194329RNF381
NM_194328RNF381
NM_194330RNF381
NM_022781RNF381
NM_194332RNF381
NM_000260MYO7A1
NM_002563P2RY11
NM_001007527LMBRD21
NM_080760DACH11
NM_080759DACH11
NM_004392DACH11
NM_000450SELE1
NM_015455CNOT61
NM_145295ZNF6271
XM_209227LOC6534641
NM_001821CHML1
XM_373030LOC2855561
XM_939505LOC2855561
NM_006020ALKBH11
NM_0010993341
NM_020359PLSCR21
NM_020147THAP101
NM_018462C3orf101
NM_033020TRIM331
NM_015906TRIM331
XM_929931LOC6534891
XM_001128468NSF1
NM_006178NSF1
NM_005497GJA71
NM_001080383GJA71
NM_000081LYST1
NM_148170CTSC1
NM_006544EXOC51
NM_032783CBR41
NM_001003760KLHL311
NM_177972TUB1
NM_003320TUB1
NM_015174KIAA10861
NM_006194PAX91
NM_177405CECR11
NM_015239AGTPBP11
NM_004727SLC24A11
NM_018712ELMOD11
NM_025133FBXO111
NM_001033925TIAL11
NM_003252TIAL11
NM_015683ARRDC21
NM_001025604ARRDC21
NM_173475DCUN1D31
NM_006359SLC9A61
NM_001042537SLC9A61
NM_194314ZBTB411
NM_024636STEAP41
NM_174975SEC14L31
NM_021964ZNF1481
NM_000163GHR1
NM_178013PRIMA11
NM_032810ATAD11
NM_001034915RBM35A1
NM_001116ADCY91
XM_001130398LOC7316661
XM_001131009LOC7296801
NM_001268RCBTB21
XM_926112LOC4411551
XM_930997LOC4411551
XM_496814LOC4411551
XM_931006LOC4411551
NM_014827ZC3H11A1
XM_936434LOC4411551
XM_942821LOC4411551
XM_942819LOC4411551
XM_942815LOC4411551
NM_001042520MGC130571
NM_001042521MGC130571
NM_001042519MGC130571
NM_032321MGC130571
NM_015533DAK1
NM_173214NFAT51
NM_006599NFAT51
NM_138714NFAT51
NM_0011131781
NM_138713NFAT51
NM_006716DBF41
NM_032124HDHD21
NM_002025AFF21
NM_030648SETD71
NM_020825CRAMP1L1
NM_019617GKN11
NM_005065SEL1L1
NM_001007176C8orf221
NM_033331CDC14B1
NM_003671CDC14B1
NM_001077181CDC14B1
NM_178012TUBB2B1
NM_014331SLC7A111
NM_005792MPHOSPH61
NM_015423AASDHPPT1
NM_018264TYW11
NM_021183RAP2C1
NM_152261C12orf231
NM_0010937721
NM_000222KIT1
NM_080836STK351
NM_001003722GLE1L1
NM_014746RNF1441
XM_926071LOC6425921
NM_0010996921
NM_015576ERC21
NM_021067GINS11
XM_001129103LOC7290291
XM_001128912LOC7312381
NM_017526LEPROT1
NM_172388NFATC11
NM_006162NFATC11
NM_172389NFATC11
NM_172387NFATC11
NM_024573C6orf2111
NM_1735951
NM_001081640PRKDC1
NM_006904PRKDC1
NM_018326GIMAP41
NM_001029883FLJ349311
NM_001079685KIAA11911
NM_020444KIAA11911
NM_001079684KIAA11911
NM_003317TITF11
NM_001079668TITF11
NM_052832SLC26A71
NM_198240CLIP11
NM_002956CLIP11
NM_015147CEP681
NM_001040199CLDND11
NM_001040200CLDND11
NM_001040181CLDND11
NM_001040183CLDND11
NM_019895CLDND11
NM_001040182CLDND11
NM_022842CDCP11
NM_0208461
NM_014936ENPP41
NM_001001394HCG31
NM_0010976361
NM_0010976341
NM_0010976351
NM_001490GCNT11
NM_0010976331
NM_007375TARDBP1
NM_001082480ZNF6231
NM_014789ZNF6231
NM_153346CXorf201
NM_182767SLC6A151
NM_017955CDCA41
NM_182511CBLN21
NM_145701CDCA41
NM_012306FAIM21
NM_003108SOX111
NM_020672S100A141
NM_032808LINGO11
NM_0330261
NM_018027FRMD4A1
NM_005708GPC61
NM_014730KIAA01521
NM_018115SDAD11
NM_032495HOP1
NM_139212HOP1
NM_139211HOP1
NM_014867KBTBD111
NM_021629GNB41
NM_153364FAM71C1
NM_033262SLC8A31
NM_183002SLC8A31
NM_058240SLC8A31
NM_182936SLC8A31
NM_182932SLC8A31
NM_002397MEF2C1
NM_001024647RAB3IP1
NM_022456RAB3IP1
NM_175624RAB3IP1
NM_175625RAB3IP1
NM_175623RAB3IP1
NM_001040446MTMR121
NM_001001936AFAP1L21
NM_032550AFAP1L21
NM_015471NSL11
NM_001042549NSL11
NM_032864PRPF38A1
NM_145753PHLDB21
NM_014672KIAA03911
XM_931945LOC6439621
XM_943665LOC6439621
NM_001083112GPD21
NM_000408GPD21
NM_152707SLC25A161
NM_001039547GK51
NM_001077619LOC1378861
NM_001040020FAM3C1
NM_014888FAM3C1
NM_001042467MLPH1
NM_024101MLPH1
XM_496575FLJ140821
XM_936846FLJ140821
NM_021615CHST61
NM_001537HSBP11
NM_004744LRAT1
NM_001031702SEMA5B1
NM_024561NARG1L1
NM_198461LONRF21
NM_198836ACACA1
NM_198837ACACA1
NM_198834ACACA1
NM_198838ACACA1
NM_198839ACACA1
NM_138417KTI121
NM_016059PPIL11
NM_057170GIT21
NM_057169GIT21
NM_014776GIT21
XM_927712LOC4401041
XM_938268TBX181
NM_001080508TBX181
NM_0133181
NM_152307C14orf1721
NM_030645SH3BP5L1
NM_177951PPM1A1
NM_000348SRD5A21
NM_004507HUS11
NM_014423AFF41
NM_207333ZNF3201
NM_198098AQP11
NM_019089HES21
NM_006371CRTAP1
NM_133647SLC12A61
NM_001042495SLC12A61
NM_001042494SLC12A61
NM_001042497SLC12A61
NM_005135SLC12A61
NM_001042496SLC12A61
NM_003926MBD31
NM_006651CPLX11
NM_005250FOXL11
NM_000587C71
NM_022755IPPK1
NM_014910ZNF5071
NM_202003FOXM11
NM_202002FOXM11
NM_021953FOXM11
NM_006591POLD31
NM_022725FANCF1
NM_017410HOXC131
NM_001006641SLC25A251
NM_001006642SLC25A251
NM_052901SLC25A251
NM_001006643SLC25A251
NM_014285EXOSC21
NM_016083CNR11
NM_033181CNR11
NM_021049MAGEA51
NM_145715TIGD21
NM_138723BCL2L141
NM_030766BCL2L141
NM_138722BCL2L141
NM_013986EWSR11
NM_005243EWSR11
NM_022067C14orf1331
NM_001077196PDE11A1
NM_001077197PDE11A1
NM_016953PDE11A1
NM_015199ANKRD281
NM_014732KIAA05131
NM_005845ABCC41
NM_014838ZBED41
NM_024422DSC21
NM_004949DSC21
XM_375443LOC2841001
NM_005158ABL21
NM_007314ABL21
NM_0011001081
NM_000441SLC26A41
NM_003679KMO1
NM_138793CANT11
NM_003889NR1I21
NM_022002NR1I21
NM_033013NR1I21
NM_023923PHACTR41
NM_001048183PHACTR41
NM_021951DMRT11
NM_014243ADAMTS31
NM_020435GJA121
NM_033138CALD11
NM_033139CALD11
NM_004342CALD11
NM_033157CALD11
NM_033140CALD11
NM_206925CA121
NM_001218CA121
NM_004487GOLGB11
NM_015090NFASC1
NM_000276OCRL1
NM_001587OCRL1
NM_021641ADAM121
NM_014798PLEKHM11
XM_001128220PLEKHM11
NM_181789GLDN1
NM_016141DYNC1LI11
NM_005201CCR81
NM_152750FLJ238341
NM_001620AHNAK1
NM_016489NT5C31
NM_001002010NT5C31
NM_001002009NT5C31
NM_173497HECTD21
NM_144723ZMAT21
NM_005207CRKL1
NM_000850GSTM41
NM_000848GSTM21
NM_000561GSTM11
NM_146421GSTM11
NM_001006667TAC31
NM_013251TAC31
NM_0011052141
NM_004674ASH2L1
NM_030759NRBF21
NM_000771CYP2C91
NM_024585ARMC71
NM_203437AFTPH1
NM_001002243AFTPH1
NM_017657AFTPH1
NM_018553C17orf851
NM_007236CHP1
NM_012393PFAS1
NM_017964SLC30A61
XM_927936LOC6448411
XM_935685LOC6419331
XM_938176LOC6448411
NM_032833PPP1R15B1
NM_006980MTERF1
NM_015987HEBP11
NM_153251ZDHHC201
NM_004684SPARCL11
NM_000332ATXN11
NM_182935MOBP1
NM_014952BAHD11
NM_017628KIAA15461
NM_002716PPP2R1B1
NM_173654C3orf641
NM_001201BMP31
NM_033437PDE5A1
NM_001083PDE5A1
NM_033430PDE5A1
NM_153451ORAOV11
NM_003438ZNF1371
XM_496634LOC3447871
XM_039908LOC916641
NM_001040185ZNF7651
NM_001008401ZNF7611
NM_0010996941
NM_002945RPA11
NM_001148ANK21
NM_020977ANK21
NM_001013659ZNF7931
NM_025135FHOD31
NM_032440LCOR1
NM_198261RSRC21
NM_198262RSRC21
NM_023012RSRC21
NM_181678PPP2R2B1
NM_181676PPP2R2B1
NM_181677PPP2R2B1
NM_181675PPP2R2B1
NM_181674PPP2R2B1
NM_004576PPP2R2B1
NM_018440PAG11
NM_005233EPHA31
NM_001010895LOC3757481
NM_005911MAT2A1
NM_020734FAM80B1
NM_016073HDGFRP31
NM_018649H2AFY21
NM_016125LOC511361
NM_080550AP1GBP11
NM_007247AP1GBP11
NM_007147ZNF1751
NM_004985KRAS1
NM_033360KRAS1
NM_0011026121
NM_003338UBE2D11
NM_139245PPM1L1
NM_178353LCE1E1
NM_144570HN1L1
NM_007212RNF21
NM_033495KLHL131
NM_173509C1orf761
NM_012300FBXW111
NM_033644FBXW111
NM_033645FBXW111
NM_007315STAT11
NM_003584DUSP111
NM_145176SLC2A121
XM_001130691LOC7295781
XM_001127109LOC7307611
NM_001584MPPED21
NM_005370RAB8A1
NM_013989DIO21
NM_001007023DIO21
NM_000793DIO21
NM_001776ENTPD11
NM_0010981751
NM_144778MBNL21
NM_133261GIPC31
NM_001001872C14orf371
NM_006136CAPZA21
NM_022370ROBO31
NM_152551C6orf1511
NM_145160MAP2K51
NM_002757MAP2K51
NM_058169LOH12CR11
NM_001918DBT1
NM_019001XRN11
NM_001042604XRN11
NM_001420ELAVL31
NM_032281ELAVL31
NM_001789CDC25A1
NM_201567CDC25A1
NM_000287PEX61
NM_018371ChGn1
NM_000866HTR1F1
NM_004676PRY1
NM_001002758PRY21
NM_017946FKBP141
NM_016033FAM82B1
NM_001024688NBN1
NM_002485NBN1
NM_030621DICER11
NM_177438DICER11
NM_002062GLP1R1
NM_003029SHC11
NM_001079673FNDC3A1
NM_014923FNDC3A1
NM_0152951
NM_020125SLAMF81
NM_054022GOSR21
NM_004287GOSR21
NM_006811SERINC31
NM_006242PPP1R3D1
NM_002473MYH91
NM_000484APP1
NM_201414APP1
NM_201413APP1
NM_018409LRP2BP1
NM_031407HUWE11
NM_000811GABRA61
XM_001130409LOC7294881
NM_003831RIOK31
NM_001010891MTX31
NM_198399ARPP-211
NM_001025069ARPP-211
NM_001025068ARPP-211
XM_001134277LOC2213621
NM_019857CTPS21
NM_175859CTPS21
NM_015686TMEM281
NM_032123KIRREL21
NM_199180KIRREL21
NM_199179KIRREL21
NM_033505SELI1
XM_001129857PDDC11
NM_015991C1QA1
NM_001497B4GALT11
NM_032023RASSF41
NM_145687MAP4K41
NM_145686MAP4K41
NM_004834MAP4K41
NM_052956ACSM11
NM_001079526IKZF21
NM_016260IKZF21
NM_0011045861
NM_024744ALS2CR81
NM_001008212OPTN1
NM_001008213OPTN1
NM_021980OPTN1
NM_001008211OPTN1
NM_020778ALPK31
NM_000388CASR1
XM_001129158LIMS11
NM_005504BCAT11
NM_207322NLF11
NM_006575MAP4K51
NM_198794MAP4K51
NM_0056401
NM_032013NDRG31
NM_022477NDRG31
XM_942240LOC6505571
NM_173578C11orf721
NM_001001709FLJ455371
NM_176081TRDMT11
NM_004412TRDMT11
NM_176083TRDMT11
NM_002015FOXO1A1
NM_020917ZFP141
NM_031203HNRPM1
NM_005968HNRPM1
NM_006888CALM11
NM_001029939ZFAT11
NM_000579CCR51
NM_0011001681
NM_0011055361
NM_139022TSPAN321
NM_005705TSPAN321
NM_002847PTPRN21
NM_130843PTPRN21
NM_130842PTPRN21
NM_016151TAOK21
NM_004779CNOT81
NM_015553PIP3-E1
NM_203436ASCL41
NM_000991RPL281
NM_015358MORC31
NM_005829AP3S21
NM_003309TSPYL11
NM_025243SLC19A31
NM_012193FZD41
NM_000038APC1
NM_004035ACOX11
NM_007292ACOX11
NM_004464FGF51
NM_033143FGF51
NM_024947PHC31
NM_016488PPHLN11
NM_004798KIF3B1
NM_015375RIPK51
NM_199462RIPK51
NM_001001415ZNF4291
NM_016056TMBIM41
NM_032299DCUN1D51
NM_000858GUK11
NM_002483CEACAM61
NM_031886KCNA71
NM_004293GDA1
NM_018979WNK11
NM_015157PHLDB11
NM_198542ZNF7731
NM_019067GNL3L1
NM_014904RAB11FIP21
NM_007175ERLIN21
NM_004776B4GALT51
NM_005293GPR201
NM_001040402DCUN1D41
NM_015115DCUN1D41
NM_016569TBX31
NM_005996TBX31
NM_001167BIRC41
NM_005759ABI21
XM_001126750ABI21
NM_006590USP391
NM_015902EDD11
NM_017460CYP3A41
NM_006502POLH1
NM_002562P2RX71
NM_144590ANKRD221
NM_173551ANKS61
NM_030592MATN41
NM_030590MATN41
NM_003833MATN41
XM_498491LOC4399941
XM_930748LOC6423611
NM_006293TYRO31
NM_0149871
NM_025010KLHL181
NM_020452ATP8B21
NM_005120MED121
NM_005028PIP5K2A1
NM_000499CYP1A11
NM_001030060SAMD51
NM_001252CD701
NM_001040092ENPP21
NM_006209ENPP21
NM_181354OXR11
NM_019044CCDC931
NM_021648TSPYL41
NM_007182RASSF11
NM_170714RASSF11
NM_170712RASSF11
NM_170713RASSF11
NM_153757NAP1L51
NM_173814PRTG1
NM_015321CRTC11
NM_0010984821
NM_000682ADRA2B1
NM_018691C5orf31
NM_005607PTK21
NM_153831PTK21
NM_000599IGFBP51
NM_005595NFIA1
NM_005105RBM8A1
NM_031314HNRPC1
NM_001077443HNRPC1
NM_001077442HNRPC1
NM_004500HNRPC1
NM_001204BMPR21
NM_014848SV2B1
NM_015227POFUT21
NM_133634POFUT21
NM_133635POFUT21
XM_001131014LOC7296831
XM_001130799LOC7317831
NM_198859PRICKLE21
NM_0010996451
NM_178583WDFY31
NM_000217KCNA11
NM_017988SCYL21
NM_018362LIN7C1
NM_016272TOB21
XM_001130894LOC7296441
NM_021116ADCY11
NM_001037293PALM21
NM_053016PALM21
NM_020746VISA1
NM_139279MCFD21
NM_002799PSMB71
NM_024919FRMD11
NM_003200TCF31
NM_032105PPP1R12B1
NM_002481PPP1R12B1
NM_032104PPP1R12B1
NM_032103PPP1R12B1
NM_002567PEBP11
NM_020714ZNF4901
NM_005955MTF11
NM_001005845ADAM91
NM_012304FBXL71
NM_014618DBC11
NM_032924ZNF31
NM_153213ARHGEF191
NM_0010937251
NM_033631LUZP11
NM_033200TMEM112B1
NM_000322PRPH21
NM_000448RAG11
NM_052917GALNT131
NM_001039029LRTM21
NM_198490RAB431
NM_001172ARG21
NM_001042751STAG21
NM_001042750STAG21
NM_001042749STAG21
NM_006603STAG21
NM_005837POP71
NM_178571MGC510251
NM_030769NPL1
NM_133367PAQR81
NM_024584CCDC1211
NM_007325GRIA31
NM_000828GRIA31
NM_001031680RUNX31
NM_004350RUNX31
NM_017770ELOVL21
XM_941540FLJ900861
XM_371820FLJ900861
NM_017651AHI11
NM_022744C16orf581
NM_175861TMTC11
NM_014212HOXC111
NM_006813PNRC11
NM_001004329DBX21
NM_145005C9orf721
NM_001009554MFAP3L1
NM_021647MFAP3L1
XM_001134208LOC7299751
XM_001134327LOC7323241
NM_001080412ZBTB381
XM_001133510ZBTB381
NM_0024581
NM_001033564LOC6192081
NM_012233RAB3GAP11
NM_001730KLF51
NM_007072HHLA21
NM_213594RFX41
NM_032491RFX41
NM_000411HLCS1
NM_001002026CLDN181
NM_016369CLDN181
NM_003722TP73L1
NM_021961TEAD11
NM_018135MRPS18A1
NM_152267RNF1851
NM_020546ADCY21
NM_015627LDLRAP11
NM_031445AMMECR1L1
NM_054026CNOT71
NM_173644C20orf1971
NM_012257HBP11
NM_021970MAP2K1IP11
NM_002523NPTX21
NM_000578SLC11A11
NM_033666ITGB11
NM_015270ADCY61
NM_020983ADCY61
NM_198952NUDT11
NM_198950NUDT11
NM_198949NUDT11
NM_002452NUDT11
NM_198948NUDT11
NM_198953NUDT11
NM_198954NUDT11
NM_017588WDR51
NM_052821WDR51
NM_004506HSF21
NM_003178SYN21
NM_052923ZNF4521
NM_032790TMEM142A1
NM_003713PPAP2B1
NM_177414PPAP2B1
NM_001040441ZBTB81
XM_001124597LOC7304111
NM_015967PTPN221
NM_006903PPA21
NM_176866PPA21
NM_176869PPA21
NM_176867PPA21
NM_001034191PPA21
NM_001448GPC41
NM_138927SON1
NM_178554KY1
NM_006713SUB11
NM_173518C8orf451
NM_000544TAP21
NM_014337PPIL21
NM_017896C20orf111
NM_031417MARK41
NM_004525LRP21
NM_016441CRIM11
NM_016239MYO15A1
NM_006536CLCA21
NM_173491LSM111
NM_001039840CHIC11
NM_153711FAM26E1
NM_005316GTF2H11
NM_012242DKK11
NM_005044PRKX1
NM_153040C15orf321
NM_001024936WASF11
NM_003931WASF11
NM_001024934WASF11
NM_001024935WASF11
NM_017799C14orf1011
NM_203349SHC41
NM_005006NDUFS11
NM_001040202PAQR31
NM_016142HSD17B121
NM_181670ANKS1B1
NM_014805EPM2AIP11
NM_000414HSD17B41
NM_203355CTAGE51
NM_203354CTAGE51
NM_203356CTAGE51
NM_005930CTAGE51
NM_005023PGGT1B1
NM_007005TLE41
NM_003496TRRAP1
NM_000719CACNA1C1
NM_003412ZIC11
NM_003644GAS71
NM_201432GAS71
NM_201433GAS71
NM_004959NR5A11
NM_004290RNF141
NM_183400RNF141
NM_183398RNF141
NM_183401RNF141
NM_183399RNF141
NM_014804KIAA07531
NM_014600EHD31
NM_016275SELT1
NM_000373UMPS1
NM_018084KIAA12121
NM_015185ARHGEF91
NM_015409EP4001
NM_004578RAB4A1
NM_019042PUS71
NM_023940RASL11B1
NM_015200SCC-1121
NM_0011003991
NM_003503CDC71
NM_021252RAB181
NM_002504NFX11
NM_019119PCDHB91
NM_004808NMT21
NM_003856IL1RL11
NM_138621BCL2L111
NM_006538BCL2L111
NM_024512LRRC21
NM_182697UBE2H1
NM_003344UBE2H1
NM_001025100MBP1
NM_021167GATAD11
NM_031243HNRPA2B11
NM_002137HNRPA2B11
NM_0011050781
NM_005241EVI11
NM_0011050771
NM_012426SF3B31
NM_020755SERINC11
NM_014989RIMS11
NM_004446EPRS1
NM_006754SYPL11
NM_182715SYPL11
NM_001039152RGS211
NM_006699MAN1A21
NM_001560IL13RA11
NM_006614CHL11
NM_052859RFT11
NM_014915ANKRD261
NM_001006656ZNF4731
NM_015428ZNF4731
NM_001879MASP11
NM_152694ZCCHC51
NM_015247CYLD1
NM_001042412CYLD1
NM_001042355CYLD1
NM_006111ACAA21
NM_016265ZNF121
NM_006956ZNF121
NM_006965ZNF241
NM_016373WWOX1
NM_144963FAM91A11
NM_024906SCD51
XM_946240FBXO461
XM_946239FBXO461
XM_934743FBXO461
NM_001080469FBXO461
NM_022465IKZF41
NM_016218POLK1
NM_017667CCDC1321
NM_016019LUC7L21
XM_943865LOC4400841
XM_498537LOC4400841
NM_0011096891
NM_021061ZNF2501
NM_174929ZMIZ21
NM_031449ZMIZ21
NM_015365AMMECR11
NM_001025580AMMECR11
NM_172070ZNF6501
NM_017422CALML51
NM_001077440BCLAF11
NM_001077441BCLAF11
NM_014739BCLAF11
NM_016304C15orf151
NM_016048ISOC11
NM_018713SLC30A101
NM_022841RFXDC21
NM_006038SPATA21
NM_014797ZBTB241
NM_005204MAP3K81
NM_133379TTN1
NM_004119FLT31
XM_001128291PARP81
NM_016096ZNF7061
NM_001042511ZNF7061
NM_001042510ZNF7061
NM_018638ETNK11
NM_207315LOC1296071
NM_033637BTRC1
NM_003939BTRC1
NM_001040424PRDM151
NM_002591PCK11
NM_012238SIRT11
NM_012096APPL11
XM_001128844LOC7289401
XM_001128809LOC7312091
NM_012141INTS61
NM_001039937INTS61
NM_024635MAK101
NM_018696ELAC11
NM_005437NCOA41
NM_018243SEPT111
NM_004432ELAVL21
NM_198269HIPK11
NM_181358HIPK11
NM_198268HIPK11
NM_006287TFPI1
NM_024884L2HGDH1
NM_016230CYB5R41
NM_001621AHR1
NM_024619FN3KRP1
NM_0011024211
NM_0011024201
NM_006007ZFAND51
NM_014299BRD41
NM_145804ABTB21
NM_007188ABCB81
NM_052898XKR41
XM_001132169LOC7312471
NM_022555HLA-DRB31
NM_002124HLA-DRB11
NM_002125HLA-DRB51
XM_379623FLJ412001
XM_943473FLJ412001
NM_000355TCN21
NM_005436CCDC61
NM_016507CRKRS1
NM_0150831
NM_012214MGAT4A1
NM_017953C1orf1811
NM_138734NRXN21
NM_015080NRXN21
NM_138732NRXN21
NM_032966BLR11
NM_001716BLR11
NM_001040715LOC6533191
NM_005227EFNA41
NM_003173SUV39H11
NM_145114MAX1
NM_005231CTTN1
NM_138565CTTN1
NM_002714PPP1R101
NM_0010839621
NM_003199TCF41
NM_016269LEF11
NM_020390EIF5A21
NM_018121C10orf61
NM_053064GNG21
NM_198404KCTD41
NM_019555ARHGEF31
NM_001083591CUGBP21
NM_001025077CUGBP21
NM_006561CUGBP21
NM_001025076CUGBP21
NM_145341PDCD41
NM_014456PDCD41
NM_002267KPNA31
NM_001001563TIMM501
XM_942776SYNPO21
XM_936336SYNPO21
NM_133477SYNPO21
XM_001126254LOC7305381
XM_001131842LOC7303581
XM_001131526LOC7298521
NM_016252BIRC61
NM_004773ZNHIT31
NM_172239REXO1L11
NM_052958C8orf341
NM_152416C8orf381
NM_001018058TFEC1
NM_012252TFEC1
NM_000983RPL221
NM_020132AGPAT31
NM_001037553AGPAT31
NM_212555C11orf381
NM_006998SCGN1
NM_006108SPON11
NM_022469GREM21
NM_003417ZNF2641
NM_020682AS3MT1
NM_024641MANEA1
NM_031302GLT8D21
NM_025160WDR261
NM_003411ZFY1
NM_017488ADD21
NM_017483ADD21
NM_001617ADD21
NM_152402TRAM1L11
NM_080821C20orf1081
NM_032490C14orf1421
NM_020165RAD181
NM_138381OXNAD11
NM_032142CEP1921
NM_016599MYOZ21
NM_138285NUP351
NM_018327SPTLC31
NM_005590MRE11A1
NM_005591MRE11A1
NM_017693BIVM1
NM_006446SLCO1B11
NM_001009569MLLT101
NM_004641MLLT101
NM_025237SOST1
NM_017824MARCH51
NM_144675GSG1L1
NM_0011097631
NM_020962NOPE1
NM_019844SLCO1B31
XM_001127257LOC7307971
XM_001127694LOC7285371
NM_003034ST8SIA11
NM_001012393OPCML1
NM_002545OPCML1
NM_014974DIP2C1
NM_207645LOC3999471
NM_025235TNKS21
NM_006622PLK21
NM_001007189LOC4923111
NM_003913PRPF4B1
NM_016620ZNF6441
NM_201269ZNF6441
NM_032186ZNF6441
NM_013313YPEL11
NM_024665TBL1XR11
NM_173199NR4A31
NM_003714STC21
NM_153835GPR1131
NM_020467LOC572281
NM_001031628LOC572281
NM_001033873LOC572281
NM_138818PRUNE21
NM_016544RBJ1
NM_175876EXOC81
NM_013995LAMP21
NM_015259ICOSLG1
NM_022757CCDC141
NM_006424SLC34A21
NM_144726RNF1451
NM_144664FAM76B1
NM_001077426ZNF5861
NM_014480ZNF5441
NM_004642CDK2AP11
NM_004474FOXD21
NM_138634MSMB1
NM_002443MSMB1
NM_030763NSBP11
NM_014876JOSD11
NM_006762LAPTM51
NM_022766CERK1
NM_001044722CSNK1G31
NM_001031812CSNK1G31
NM_001044723CSNK1G31
NM_004384CSNK1G31
NM_032725BUD131
NM_015110SMC51
NM_021191NEUROD41
NM_180991SLCO4C11
NM_003941WASL1
NM_005779LHFPL21
NM_001017523BTBD111
NM_001018072BTBD111
XM_001128903LOC7312361
XM_001131717LOC7299021
NM_001039618CREBZF1
NM_152622MIER31
NM_025076UXS11
NM_145284FAM122B1
NM_182749N6AMT11
NM_013240N6AMT11
NM_018566YOD11
NM_145034TOR1AIP21
NM_019063EML41
NM_020204LHX91
NM_001014434LHX91
NM_020766PCDH191
NM_0011052431
NM_181723EFHA21
NM_0071501
NM_001002923IGFL41
NM_019049FLJ200541
NM_0011110191
NM_145117NAV21
NM_182964NAV21
NM_0011110181
XM_001127197LOC7280051
XM_001132588LOC7290921
XM_001127140LOC7280051
XM_001132582LOC7290921
XM_001127212LOC7280051
XM_001127181LOC7280051
XM_001132574LOC7290921
XM_001132585LOC7290921
NM_001037131CENTG21
NM_014914CENTG21
NM_005433YES11
NM_031438NUDT121
NM_016061YPEL51
NM_012287CENTB21
NM_000028AGL1
NM_000646AGL1
NM_000645AGL1
NM_000644AGL1
NM_000642AGL1
NM_000643AGL1
NM_133446CTGLF11

Immunostimulatory motif search results


UGUGU - Judge et al. Sequence-dependent stimulation of the mammalian innate immune response by synthetic siRNA. Nat Biotechnol. 2005 Apr;23(4):457-62. (PMID: 15778705)
No Immunostimulatory motif found (UGUGU).

GUCCUUCAA - Hornung et al. Sequence-specific potent induction of IFN-alpha by short interfering RNA in plasmacytoid dendritic cells through TLR7. Nat Med. 2005 Mar;11(3):263-70. Epub 2005 Feb 20. (PMID: 15723075)
No Immunostimulatory motif found (GUCCUUCAA).



Settings used for search

Scores were calculated using scoring scheme SS1
Using AVG scoring mode.

Hit scores

ParameterSpec. Score cut-offColourComment
Hit to same geneColourHits to the same accession or genes with 100 percent identity (i.e. likely transcript variants). It is advisable to always check the genes hit.
High scoring hit≥80ColourHits are very likely to cause an off-target effect
Medium scoring hit<80¸≥40ColourHits with a small chance of causing an off target effect.
Low scoring hitColourHits very unlikely to cause an off-target effect

The mismatches are colour coded based on the weighting of that position.

Cut-offColour
MatchColour
Wobble base pairs (G-U)Colour
Critical bases (none)Colour
0.6 bitsColour
0.4 bitsColour
0.2 bitsColour

About SpecificityServer

SpecificityServer is designed to help you identify potential non-specific matches to your siRNA. It incorporates the latest information about non-specific matches (sequence-specific only).

Designed by: Alistair Chalk, Quan Du, Zicai Liang and Erik L.L. Sonnhammer


For more details about the algorithm "siRNA specificity searching incorporating mismatch tolerance data" Bioinformatics (2008) 24 (10): 1316-1317