Predicted Off-targets for siRNA "aaugucaacaaccgaccuuga" Using siRNA SpecificityServer

Specificity Server [Result page v1.0]


SpecificityServer - An siRNA design program for determining siRNA specificity

Automatic recommendation
OK - siRNA is specific for both sense and antisense (guide) strands

No (unfiltered) hits were found for :UGUCAACAACCGACCUUGA


3 prime UTR Seed matches

Hits to same gene : 0
Hits to other genes : 1295
View matched accessions

3 prime seed match details

AccessionGene nameHits to this gene
NM_013402FADS14
XM_001132564LOC7288824
XM_001133521MGC513384
NM_001080437SNED13
XM_940984SNED13
NM_014906PPM1E3
NM_024577SH3TC23
NM_017762MTMR102
XM_379694LOC4015772
XM_942510LOC6528272
XM_928150LOC4015772
NM_025074FRAS12
NM_006581FUT92
NM_006918SC5DL2
NM_001024956SC5DL2
NM_0010988322
NM_032837FAM104A2
NM_001080975REPS22
NM_004726REPS22
NM_022766CERK2
NM_001004317LIN28B2
NM_001044722CSNK1G32
NM_001031812CSNK1G32
NM_001044723CSNK1G32
NM_004384CSNK1G32
NM_005158ABL22
NM_007314ABL22
NM_0011001082
NM_004822NTN12
NM_014850SRGAP32
NM_001033117SRGAP32
NM_020338ZMIZ12
NM_033224PURB2
NM_001012418LOC3401562
NM_001014797KCNMA12
XM_001128799MAP3K22
XM_001130495LOC7284292
NM_033637BTRC2
NM_003939BTRC2
NM_004717DGKI2
NM_1735692
NM_139169TRUB12
NM_017705PAQR52
NM_0011045542
NM_012198GCA2
NM_033020TRIM332
NM_015906TRIM332
NM_173851SLC30A82
NM_001024843TNRC6B2
NM_015088TNRC6B2
NM_0011013722
NM_014630ZNF5922
NM_033121ANKRD13A2
NM_205852CLEC12B2
XM_001126195LOC7279422
NM_002655PLAG12
NM_006315PCGF32
NM_021116ADCY12
NM_005795CALCRL2
NM_016399TRIAP12
NM_016640MRPS302
NM_003338UBE2D12
NM_001001389CD442
NM_001001390CD442
NM_001001391CD442
NM_001001392CD442
NM_000610CD442
NM_007375TARDBP2
NM_015852ZNF1172
XM_001131007LOC7296782
XM_001127177LOC7307802
NM_0010985091
NM_014853RUTBC11
NM_020771HACE11
NM_194247HNRPA31
NM_018238AGK1
NM_002480PPP1R12A1
NM_001328CTBP11
NM_001012614CTBP11
NM_212554LOC3998181
NM_016206VGLL31
NM_013378VPREB31
NM_033342TRIM71
NM_004229CRSP21
NM_173658ZNF6601
NM_173174PTK2B1
NM_004103PTK2B1
NM_173175PTK2B1
NM_173176PTK2B1
NM_021945C6orf851
NM_024103SLC25A231
NM_139289AKAP41
NM_003886AKAP41
NM_182663RASSF51
NM_182664RASSF51
NM_182665RASSF51
XM_932892LOC6436231
XM_945080LOC6436231
NM_001481GAS81
NM_016620ZNF6441
NM_201269ZNF6441
NM_032186ZNF6441
NM_145175FAM84A1
NM_032047B3GNT51
NM_001295CCR11
NM_001332CTNND21
NM_017761PNRC21
NM_182758WDR721
NM_032735BEST31
NM_152439BEST31
NM_152361EID2B1
NM_007204DDX201
NM_020190OLFML31
NM_020860STIM21
NM_003651CSDA1
NM_199320PHF171
NM_006963ZNF221
NM_213606SLC16A121
NM_014586HUNK1
NM_181705LYRM71
NM_014743KIAA02321
NM_0011005901
NM_001002860BTBD71
NM_176825SULT1C21
NM_001056SULT1C21
NM_004815ARHGAP291
NM_0247761
NM_057170GIT21
NM_057169GIT21
NM_014776GIT21
NM_175854PAN31
NM_004582RABGGTB1
NM_145060C18orf241
NM_001039535C18orf241
NM_005036PPARA1
NM_001001928PPARA1
NM_004136IREB21
NM_020704FAM40B1
NM_032289PSD21
XM_938194LOC1276021
XM_059166LOC1276021
NM_005436CCDC61
NM_000337SGCD1
NM_005683GPR551
NM_032432ABLIM21
NM_033505SELI1
NM_000138FBN11
NM_014763MRPL191
NM_003211TDG1
NM_004530MMP21
NM_001034841LOC1620731
NM_003020SCG51
NM_004263SEMA4F1
NM_004523KIF111
NM_207361FREM21
NM_148571MRPL271
NM_199044NSUN41
NM_004936CDKN2B1
NM_078487CDKN2B1
NM_032961PCDH101
NM_000368TSC11
NM_198154TMEM951
NM_014976PDCD111
NM_153698C9orf211
NM_173825RABL31
XM_926634LOC6532561
NM_014862ARNT21
NM_018988GFOD11
NM_133493CD1091
NM_015460MYRIP1
NM_018241TMEM341
NM_194292SASS61
NM_007236CHP1
NM_003034ST8SIA11
NM_001040100C3orf571
NM_001001549GRB101
NM_001001555GRB101
NM_001001550GRB101
NM_005311GRB101
NM_017592IXL1
NM_152672OSTalpha1
NM_198381ELF51
NM_001422ELF51
NM_001008537KIAA20221
NM_001010867C1orf691
XM_942692MGC51391
NM_001080533MGC51391
NM_145115ZNF4981
NM_007153ZNF2081
NM_020390EIF5A21
NM_138477CDAN11
XM_001129302CDAN11
NM_019114EPB41L4B1
NM_003200TCF31
NM_032551KISS1R1
NM_0010937551
NM_0010937561
NM_024941FLJ136111
NM_005999TSNAX1
NM_019083CCDC761
NM_153256C10orf471
NM_054030MRGPRX21
NM_020139BDH21
NM_178544ZNF5461
NM_018939PCDHB61
NM_015294TRIM371
NM_005605PPP3CC1
NM_001042646TRAK11
NM_012471TRPC51
NM_001001330REEP31
NM_173815FLJ374641
NM_145655GCNT21
NM_145649GCNT21
NM_001491GCNT21
NM_004473FOXE11
NM_152267RNF1851
NM_001695ATP6V1C11
NM_006226PLCL11
XM_001134308LOC7322751
NM_003014SFRP41
NM_033362MRPS121
NM_033363MRPS121
NM_021107MRPS121
NM_178812MTDH1
NM_020147THAP101
NM_152383DIS3L21
NM_080669SLC46A11
NM_0245621
NM_144498OSBPL21
NM_014835OSBPL21
NM_007371BRD31
NM_018058CRTAC11
NM_152375KLHDC7A1
NM_003489NRIP11
NM_002015FOXO1A1
XM_370871LOC1458371
NM_001448GPC41
NM_173516PNLDC11
NM_153215C3orf451
NM_016101NIP71
NM_020818KIAA14091
NM_134447C19orf21
NM_003796C19orf21
NM_014309RBM91
NM_001082576RBM91
NM_001082577RBM91
NM_001031695RBM91
NM_001082578RBM91
NM_001082579RBM91
NM_001005502CPM1
NM_198320CPM1
NM_001874CPM1
NM_006352ZNF2381
NM_205768ZNF2381
NM_052965C1orf191
XM_938090PEAR11
NM_001080471PEAR11
NM_017681NUP62CL1
NM_003312TST1
XM_926793LOC6427571
XM_942502LOC6427571
NM_014141CNTNAP21
NM_080706TRPV11
NM_018727TRPV11
NM_080704TRPV11
NM_080705TRPV11
XM_942121LOC6458431
XM_930419LOC6458431
NM_018027FRMD4A1
NM_002340LSS1
NM_006172NPPA1
NM_016376ANKFY11
NM_152487TMEM561
NM_014663JMJD2A1
NM_001007102L3MBTL31
NM_032438L3MBTL31
NM_017420SIX41
NM_017790RGS31
NM_006548IGF2BP21
NM_001007225IGF2BP21
XM_001131823ANKRD30A1
NM_052997ANKRD30A1
NM_002644PIGR1
NM_017904TTC221
NM_138690GRIN3B1
NM_021202TP53INP21
NM_0011111131
NM_005339HIP21
NM_0011111121
XM_001133586LOC2834801
XM_001128338LOC2834801
XM_927997LOC6433381
XM_938980LOC6433381
NM_032276RHBDD11
NM_000574CD551
NM_016428ABI31
NM_016614TTRAP1
NM_001012961C1orf841
XM_927936LOC6448411
XM_935685LOC6419331
XM_938176LOC6448411
NM_139015SPPL31
NM_017754C6orf1071
NM_018962DSCR61
NM_001679ATP1B31
XM_001133534ATP1B31
XM_001133533ATP1B31
NM_033379CDC21
NM_001786CDC21
NM_002750MAPK81
NM_139046MAPK81
NM_032359C3orf261
NM_001040445ASB11
NM_000909NPY1R1
NM_000550TYRP11
NM_018018SLC38A41
NM_002747MAPK41
NM_000217KCNA11
NM_001039570KREMEN11
NM_001039571KREMEN11
NM_001037165FOXK11
NM_032383HPS31
NM_058237KIAA16221
NM_013245VPS4A1
NM_133510RAD51L11
NM_004086COCH1
NM_004472FOXD11
NM_007106UBL31
NM_016173HEMK11
NM_001171ABCC61
NM_145272C17orf501
NM_003247THBS21
NM_001196BID1
NM_197967BID1
NM_197966BID1
NM_014016SACM1L1
NM_003307TRPM21
NM_198484ZNF6211
NM_0010984141
NM_001042493C6orf1621
NM_020425C6orf1621
NM_014424HSPB71
NM_000529MC2R1
NM_133458ZFP901
NM_002098GUCA1B1
NM_021007SCN2A1
NM_001040142SCN2A1
NM_001040143SCN2A1
NM_007038ADAMTS51
NM_152851MS4A6A1
NM_152852MS4A6A1
NM_152740HIBADH1
NM_002235KCNA61
NM_005664MKRN31
NM_001018111PODXL1
NM_005397PODXL1
NM_198281GPRIN31
NM_004355CD741
NM_001025159CD741
NM_001025158CD741
NM_000813GABRB21
NM_021911GABRB21
NM_199040NUDT41
NM_019094NUDT41
NM_012325MAPRE11
NM_174938FRMD31
NM_022153C10orf541
NM_007050PTPRT1
NM_133170PTPRT1
NM_033107GTPBP101
NM_001042717GTPBP101
NM_001009909LUZP21
NM_001005411FCGR2C1
NM_001005410FCGR2C1
NM_001080523ARRDC51
XM_940152LOC6454321
NM_020335VANGL21
NM_152756RICTOR1
NM_144973MGC240391
NM_198485FAM79B1
NM_000351STS1
NM_003178SYN21
NM_005399PRKAB21
NM_014044UNC501
NM_005905SMAD91
NM_0251851
NM_152866MS4A11
NM_021950MS4A11
NM_016532SKIP1
NM_130766SKIP1
NM_170724PKHD11
NM_000719CACNA1C1
NM_020342SLC39A101
NM_032458PHF61
NM_001015877PHF61
NM_016040TMED51
NM_006359SLC9A61
NM_001042537SLC9A61
NM_152458ZNF7851
NM_145212MRPL301
NM_017623CNNM31
NM_199078CNNM31
NM_019843EIF4ENIF11
NM_138444KCTD121
NM_145276ZNF5631
NM_207406CCDC41
NM_022346NCAPG1
NM_138288C14orf1471
NM_174899FBXO361
NM_014765TOMM201
NM_016617UFM11
NM_000161GCH11
XM_936273ZSWIM61
XM_035299ZSWIM61
NM_005843STAM21
NM_178123SESTD11
NM_007131ZNF751
NM_030645SH3BP5L1
NM_001412EIF1AX1
NM_001004328ZNF705A1
NM_199413PRC11
NM_199414PRC11
NM_003981PRC11
NM_014058TMPRSS11E1
NM_0010996621
NM_006016CD1641
XM_001130189LOC7315981
XM_001129850LOC7292911
NM_130794CST111
NM_080830CST111
NM_001042552TATDN31
NM_001042553TATDN31
NM_152423MUM1L11
NM_004347CASP51
NM_032689ZNF6071
NM_024028PCYOX1L1
NM_031442TMEM471
NM_013274POLL1
NM_016540GPR831
NM_015397WDR40A1
NM_199332HOMER21
NM_004839HOMER21
NM_199331HOMER21
NM_199330HOMER21
NM_022492TTC311
NM_012395PFTK11
NM_206914FAM119B1
NM_152278TCEAL71
NM_198549FAM73A1
NM_005652TERF21
NM_000027AGA1
NM_173582PGM2L11
NM_023943TMEM1081
NM_001905CTPS1
NM_001560IL13RA11
NM_053042KIAA17291
NM_015071ARHGAP261
NM_006699MAN1A21
NM_001014380KATNAL11
NM_032116KATNAL11
NM_153235TXLNB1
NM_013231FLRT21
NM_012080HDHD1A1
NM_001025252TPD521
NM_001025253TPD521
NM_005079TPD521
NM_005010NRCAM1
NM_001037133NRCAM1
NM_001037132NRCAM1
NM_005096ZMYM31
NM_201599ZMYM31
NM_016084RASD11
NM_032778MINA1
NM_153182MINA1
NM_001042533MINA1
XM_001127055MGC870421
XM_001128503MGC870421
XM_001128032MGC870421
NM_001079529LOC2021341
NM_147189FAM110B1
NM_017896C20orf111
NM_080832PABPC51
NM_014660PHF141
NM_178585WDFY31
NM_014991WDFY31
NM_153757NAP1L51
XM_943391LOC3399701
XM_291095LOC3399701
NM_022824FBXL171
NM_152356ZNF4911
NM_198459DENND2C1
NM_207325DPY19L31
NM_014445SERP11
XM_925973LOC6530971
NM_172239REXO1L11
NM_032501ACSS11
NM_016023OTUD6B1
NM_004776B4GALT51
NM_152765C8orf461
NM_174934SCN4B1
NM_013261PPARGC1A1
NM_052904KLHL321
NM_018958C15orf21
NM_173487C4orf331
NM_0010997831
NM_018658KCNJ161
NM_170742KCNJ161
NM_170741KCNJ161
NM_019046ANKRD161
NM_002358MAD2L11
NM_001001931MTUS11
NM_001001924MTUS11
NM_020749MTUS11
NM_001001925MTUS11
NM_176081TRDMT11
NM_004412TRDMT11
NM_176083TRDMT11
NM_0150381
NM_199351C1orf321
NM_001003652SMAD21
NM_005901SMAD21
NM_013444UBQLN21
XM_941807NHSL11
XM_496826NHSL11
NM_002298LCP11
NM_000113TOR1A1
NM_005840SPRY31
NM_018834MATR31
NM_199189MATR31
NM_017831RNF1251
NM_006014LAGE31
NM_032505KBTBD81
NM_002543OLR11
NM_004088DNTT1
NM_001017520DNTT1
NM_014035SNX241
XM_939083TTC281
XM_929318TTC281
NM_020194C2orf331
NM_144570HN1L1
NM_014632MICAL21
NM_015271TRIM21
NM_153689FLJ389731
NM_021140UTX1
NM_000046ARSB1
NM_012465TLL21
NM_005497GJA71
NM_001080383GJA71
NM_004852ONECUT21
NM_194286KIAA18531
NM_002706PPM1B1
NM_177969PPM1B1
NM_001033557PPM1B1
NM_020922WNK31
NM_001002838WNK31
NM_001015882bA16L21.2.11
NM_020443NAV11
XM_001127950LOC7305661
XM_001133333LOC7291721
NM_002264KPNA11
NM_014499P2RY101
NM_198333P2RY101
NM_005933MLL1
NM_017953C1orf1811
NM_014023WDR371
NM_207335KLHDC61
XM_001133045LOC1497731
XM_001133447LOC1497731
NM_014679CEP571
NM_002714PPP1R101
NM_003703NOL141
NM_021136RTN11
NM_206852RTN11
NM_206857RTN11
NM_024687FLJ230491
NM_205864CAGE11
NM_052886MAL21
XM_942072CPN21
NM_001080513CPN21
NM_152855IGLL11
NM_020070IGLL11
NM_173629C18orf261
NM_019857CTPS21
NM_175859CTPS21
NM_080737SYTL41
NM_005521TLX11
NM_000486AQP21
NM_020315PDXP1
NM_001048201UHRF11
NM_013282UHRF11
NM_145687MAP4K41
NM_145686MAP4K41
NM_004834MAP4K41
NM_001013618LOC913531
NM_006154NEDD41
NM_198400NEDD41
NM_014325CORO1C1
NM_015879ST8SIA31
NM_173463DKFZp761B1071
NM_152641ARID21
NM_0133181
NM_178564NRBP21
NM_003440ZNF1401
NM_002887RARS1
NM_001004432LINGO41
NM_003811TNFSF91
NM_015559SETBP11
NM_0011023961
NM_025073SIKE1
NM_000104CYP1B11
XM_001127199LOC7280071
NM_003749IRS21
NM_000090COL3A11
NM_019117KLHL41
XM_001130020KIAA11471
XM_001130081KIAA11471
NM_001080392KIAA11471
NM_006778TRIM101
NM_052828TRIM101
NM_000809GABRA41
NM_032873STS-11
NM_053277CLIC61
NM_024539RNF1281
NM_194463RNF1281
NM_025218ULBP11
NM_001024465SOD21
NM_001024466SOD21
NM_014935PLEKHA61
NM_001077196PDE11A1
NM_001077197PDE11A1
NM_016953PDE11A1
NM_182831TNT1
NM_022458LMBR11
NM_005065SEL1L1
NM_022912REEP11
NM_017944USP471
NM_021158TRIB31
XM_291671RBM201
XM_939337RBM201
NM_001079526IKZF21
NM_016260IKZF21
NM_017438SETD41
NM_0150361
NM_0321731
XM_373690LOC3882821
XM_001133719LOC3882821
NM_018479ECHDC11
NM_0010020301
NM_0011055441
NM_0011055451
NM_033018PCTK11
NM_006201PCTK11
XM_001132234LOC7300541
NM_033495KLHL131
XM_932965LOC6455531
XM_945010LOC6455531
NM_031445AMMECR1L1
NM_032208ANTXR11
NM_147161ACOT111
NM_001012264RNASE131
NM_001385DPYS1
NM_019050USP531
NM_001816CEACAM81
NM_001511CXCL11
NM_002414CD991
NM_021813BACH21
NM_012425RSU11
NM_152724RSU11
NM_0011055671
NM_0011055661
NM_022113KIF13A1
NM_004114FGF131
NM_033642FGF131
NM_003217TEGT1
NM_0010985761
NM_033062KRTAP4-21
NM_145058MGC70361
NM_199454PRDM161
NM_022114PRDM161
NM_153289DEFB1191
NM_173460DEFB1191
NM_004747DLG51
NM_018708FEM1A1
NM_003347UBE2L31
NM_198157UBE2L31
NM_003051SLC16A11
NM_005828WDR681
NM_014848SV2B1
NM_001005267C15orf211
NM_001005268C15orf211
NM_001005266C15orf211
NM_001005269C15orf211
NM_173609C15orf211
XM_001131805LOC7320811
XM_001130480LOC7295051
XM_945624LOC6494451
XM_933938LOC6438721
XM_001132219LOC7286321
NM_005517HMGN21
XM_001127272LOC7305621
XM_001125913LOC7277951
NM_001001662ZNF7821
NM_004391CYP8B11
NM_005927MFAP31
NM_005098MSC1
NM_001006938TCEAL61
NM_004321KIF1A1
NM_003870IQGAP11
NM_001042413GLIS31
NM_152629GLIS31
NM_030805LMAN2L1
NM_018976SLC38A21
NM_013302EEF2K1
NM_181435C1QTNF31
NM_030945C1QTNF31
NM_006942SOX151
NM_173798ZCCHC121
XM_933310LOC6459671
XM_945193LOC6459671
NM_020463SMEK21
NM_182537HTR3D1
NM_153367C10orf561
NM_198404KCTD41
NM_005475SH2B31
NM_198570VWC21
NM_178842LASS31
NM_080650ATPBD41
NM_203453PPAPDC21
NM_015345DAAM21
NM_014240LIMD11
NM_002357MXD11
NM_015055SWAP701
NM_030639BHLHB91
NM_014897ZNF6521
NM_002731PRKACB1
NM_182948PRKACB1
NM_005082TRIM251
NM_017610RNF1111
NM_000663ABAT1
NM_020686ABAT1
NM_000838GRM11
NM_148957TNFRSF191
NM_004569PIGH1
NM_001037317PAP2D1
NM_001010861PAP2D1
NM_018048FLJ102921
NM_152564VPS13B1
NM_017890VPS13B1
NM_001076786QSER11
NM_020784KIAA13441
NM_032300TCHP1
NM_004285H6PD1
NM_016498MTP181
NM_024097C1orf501
NM_001189BAPX11
NM_004286GTPBP11
NM_015044GGA21
NM_002036DARC1
NM_173084TRIM591
NM_006995BTN2A21
NM_181531BTN2A21
NM_024642GALNT121
NM_005117FGF191
NM_016390C9orf1141
NM_006145DNAJB11
NM_002221ITPKB1
XM_943378LOC6423351
XM_930823LOC6423351
NM_024948C10orf971
NM_016531KLF31
NM_022896LPIN31
XM_001126319LOC7279991
NM_181333PRR51
NM_001017530PRR51
NM_015366PRR51
NM_001017528PRR51
NM_001017529PRR51
NM_000926PGR1
NM_001040709SYPL21
NM_001004329DBX21
NM_006410HTATIP21
NM_0010985211
NM_0010985201
NM_0010985221
NM_020404CD2481
NM_020766PCDH191
NM_0011052431
NM_016513ICK1
NM_014920ICK1
NM_0209111
NM_014650ZNF4321
NM_018453EAPP1
NM_018229C14orf1081
NM_009589ARSD1
NM_002210ITGAV1
NM_015157PHLDB11
NM_015368PANX11
NM_005910MAPT1
NM_016841MAPT1
NM_016834MAPT1
NM_016835MAPT1
NM_024613PLEKHF21
NM_030780SLC25A321
NM_033413LRRC461
NM_000089COL1A21
NM_024847TMC71
NM_198968DZIP11
NM_014934DZIP11
NM_001018112FANCA1
NM_004863SPTLC21
NM_001083112GPD21
NM_000408GPD21
XM_940609FLJ250761
XM_059689FLJ250761
NM_133334WHSC11
XM_938689KIAA16711
XM_371461KIAA16711
NM_003027SH3GL31
NM_014233UBTF1
NM_001076683UBTF1
NM_001076684UBTF1
NM_001512GSTA41
NM_016169SUFU1
NM_030806C1orf211
NM_001040659TTC231
NM_001040656TTC231
NM_001040658TTC231
NM_022905TTC231
NM_001040657TTC231
NM_001040655TTC231
NM_001040660TTC231
NM_001040633PRKAG21
NM_016203PRKAG21
NM_024429PRKAG21
NM_006372SYNCRIP1
NM_001008393LOC2017251
NM_000997RPL371
NM_001006114C21orf571
NM_199000LHFPL31
NM_032842FLJ148031
NM_014669NUP931
NM_138727ST7L1
NM_138728ST7L1
NM_017744ST7L1
NM_178177NMNAT31
NM_001010971SAMD131
NM_145298APOBEC3F1
NM_1528331
NM_006609MAP3K21
XM_929835LOC2840231
XM_941810LOC2840231
NM_001809CENPA1
NM_001042426CENPA1
NM_002067GNA111
XM_001131779LOC7309191
NM_005493RANBP91
NM_001430EPAS11
NM_130387ASB141
NM_005197CHES11
NM_0010854711
NM_001003793RBMS31
NM_001003792RBMS31
NM_021145DMTF11
NM_001017973P4HA21
NM_001017974P4HA21
NM_004199P4HA21
XM_946032LOC6448521
XM_934218LOC6448521
NM_174892CD300LB1
NM_014911AAK11
XM_928637LOC6431591
XM_942664LOC6431591
NM_052831C6orf1921
NM_023002HAPLN41
NM_004067CHN21
NM_001039936CHN21
NM_020661AICDA1
NM_001806CEBPG1
NM_018128TSR11
NM_004234ZNF2351
NM_006464TGOLN21
NM_001039380C10orf251
NM_002820PTHLH1
NM_198964PTHLH1
NM_0010987901
NM_021242MID1IP11
NM_0010987911
NM_144949SOCS51
NM_014011SOCS51
NM_018351FGD61
NM_012287CENTB21
NM_198901SRI1
NM_003130SRI1
NM_033238PML1
NM_148170CTSC1
NM_145913SLC5A81
NM_004232SOCS61
NM_153634CPNE81
NM_203472SELS1
NM_015355SUZ121
NM_006300ZNF2301
NM_144633KCNH81
NM_183394CADPS1
NM_003716CADPS1
NM_183393CADPS1
NM_0010854551
NM_020773TBC1D141
NM_145291ZNF5091
NM_025152NUBPL1
NM_0010983981
NM_004371COPA1
NM_001024372BAALC1
NM_019024HEATR5B1
XM_001130036LOC7308151
XM_001132008LOC7287691
NM_018713SLC30A101
NM_006981NR4A31
NM_173198NR4A31
NM_173200NR4A31
NM_020125SLAMF81
NM_020698TMCC31
NM_130834OPA11
NM_015560OPA11
NM_130836OPA11
NM_130831OPA11
NM_130832OPA11
NM_130837OPA11
NM_130833OPA11
NM_130835OPA11
NM_032832LRP111
NM_0251531
NM_024624SMC61
NM_0010839621
NM_003199TCF41
NM_005565LCP21
NM_032445MEGF111
NM_016478ZC3HC11
NM_019001XRN11
NM_001042604XRN11
NM_032524KRTAP4-41
NM_014838ZBED41
NM_000450SELE1
NM_002709PPP1CB1
NM_206876PPP1CB1
NM_024492LPAL21
NM_002711PPP1R3A1
NM_016184CLEC4A1
NM_194450CLEC4A1
NM_194447CLEC4A1
NM_194448CLEC4A1
NM_006390IPO81
NM_005628SLC1A51
NM_178011LRRTM31
NM_014096SLC43A31
NM_199329SLC43A31
NM_017611SLC43A31
NM_138381OXNAD11
NM_207299PRG-31
NM_017753PRG-31
NM_018566YOD11
XM_942240LOC6505571
NM_012304FBXL71
NM_198715PTGER31
NM_001077445PHF161
NM_014735PHF161
NM_183237RNF71
NM_014245RNF71
NM_001271CHD21
NM_005862STAG11
NM_139125MASP11
NM_033058TRIM551
NM_184085TRIM551
NM_184086TRIM551
NM_184087TRIM551
NM_173578C11orf721
NM_152916EMR21
NM_152918EMR21
NM_152917EMR21
NM_152920EMR21
NM_152921EMR21
NM_013447EMR21
NM_152919EMR21
NM_016091EIF3S6IP1
NM_003185TAF41
NM_006074TRIM221
NM_004429EFNB11
NM_0010400611
NM_014476PDLIM31
NM_001002862DERL31
NM_198440DERL31
NM_020787ZNF6241
NM_017765PQLC21
NM_001040126PQLC21
NM_001040125PQLC21
NM_014760TATDN21
NM_000674ADORA11
NM_001048230ADORA11
NM_152263TPM31
NM_178831GATS1
NM_133448TMEM132D1
XM_001133842LOC7294461
NM_001001420SMAD51
NM_001001419SMAD51
NM_005903SMAD51
XM_001133220LOC7292391
XM_001133473LOC7316651
NM_145861EDARADD1
NM_080738EDARADD1
NM_006598SLC12A71
NM_017811UBE2R21
NM_006767LZTR11
NM_014345ZNF3181
NM_017759FLJ203091
NM_012179FBXO71
NM_001033024FBXO71
XM_001125753MUC3B1
NM_004273CHST31
NM_013347RPA41
NM_182493MLCK1
NM_012093AK51
NM_174858AK51
NM_001001552LEMD11
NM_002581PAPPA1
NM_0011016671
NM_003501ACOX31
NM_017933PID11
NM_0011008181
NM_020150SAR1A1
NM_001018000KIAA10261
NM_001017999KIAA10261
NM_001018001KIAA10261
NM_015209KIAA10261
NM_181774SLC36A31
NM_006955ZNF33B1
NM_006974ZNF33A1
NM_006954ZNF33A1
NM_007271STK381
NM_006420ARFGEF21
NM_021821MRPS351
NM_002649PIK3CG1
NM_001082972CASC11
NM_012414RAB3GAP21
NM_016096ZNF7061
NM_001042511ZNF7061
NM_001042510ZNF7061
NM_007057ZWINT1
NM_032997ZWINT1
NM_001005413ZWINT1
NM_0010986721
NM_021947SRR1
NM_016448DTL1
NM_001077263TMPRSS131
NM_024949WWC21
NM_015107PHF81
NM_003093SNRPC1
NM_024039MIS121
NM_030786SYNC11
NM_014333CADM11
NM_0010985171
NM_201252AFAR31
NM_0010992691
NM_018186C1orf1121
NM_014159SETD21
NM_001025233CLLU11
NM_182972IRF2BP21
NM_001077397IRF2BP21
NM_001010908C1QL31
NM_024944CHODL1
NM_052896CSMD21
NM_002063GLRA21
NM_002444MSN1
NM_003476CSRP31
XM_001132645ODZ31
XM_931600ODZ31
NM_001080477ODZ31
XM_940722ODZ31
NM_002031FRK1
NM_014744TBC1D51
NM_207647FSD1L1
NM_005156ROD11
NM_004319ASTN11
NM_032102SFRS2B1
NM_004663RAB11A1
NM_018698NXT21
XM_371176FLJ418561
XM_941062FLJ418561
NM_000945PPP3R11
NM_020116FSTL51
NM_001080530LOC920171
NM_004283RAB3D1
NM_020184CNNM41
NM_147166AKAP91
NM_006148LASP11
NM_171825CAMK2A1
NM_015981CAMK2A1
NM_152277UBTD21
NM_017924C14orf1191
NM_006922SCN3A1
NM_001081677SCN3A1
NM_001081676SCN3A1
NM_005722ACTR21
NM_001005386ACTR21
NM_003241TGM41
NM_001030055ARHGAP51
NM_001173ARHGAP51
NM_015187KIAA07461
NM_018047RBM221
NM_152745NXPH11
NM_032818C9orf1001
NM_016516VPS541
NM_001005739VPS541
NM_001005473PLCXD31
NM_000461THRB1
NM_022143LRRC41
NM_014803ZNF5181
NM_001025247TAF5L1
NM_024311MFSD111
NM_006223PIN41
NM_001040000MLLT41
NM_145052UPRT1
NM_130847AMOTL11
NM_015901NUDT131
NM_020805KLHL141
NM_017554PARP141
NM_020774MIB11
NM_006710COPS81
NM_198189COPS81
NM_030641APOL61
NM_014225PPP2R1A1
NM_006255PRKCH1
NM_002868RAB5B1
NM_024626VTCN11
NM_005578LPP1
NM_001031746C10orf721
NM_003566EEA11
NM_006393NEBL1
NM_001017440CALN11
NM_031468CALN11
NM_153688ZFP11
NM_004282BAG21
NM_003243TGFBR31
NM_001080416MYBL11
NM_012262HS2ST11
NM_173854SLC41A11
NM_015338ASXL11
NM_207372SH2D4B1
NM_001010922C1orf1781
NM_020657ZNF3041
NM_018402IL261
NM_003455ZNF2021
NM_014171CRIPT1
NM_014480ZNF5441
NM_018847KLHL91
NM_145061C13orf31
NM_007225NXPH31
NM_052885SLC2A131
XM_938097DKFZP686C22811
XM_927469DKFZP686C22811
NM_016132MYEF21
XM_001126406LOC7279221
XM_001126391LOC7279221
XM_001126417LOC7279221
NM_181787DPY19L41
NM_022173TIA11
NM_022037TIA11
XM_371369MIA31
XM_943876MIA31
XM_943869MIA31
XM_943873MIA31
XM_496436MIA31
XM_932541MIA31
XM_932548MIA31
NM_198551MIA31
NM_023926ZSCAN181
NM_003558PIP5K1B1
NM_006180NTRK21
NM_001018064NTRK21
NM_016144COMMD101
XM_001129415FLJ226751
XM_001129697FLJ226751
NM_001030005CPLX31
NM_003010MAP2K41
NM_033512TSPYL51
NM_003626PPFIA11
NM_176072P2RY21
NM_002564P2RY21
NM_176071P2RY21
NM_017902HIF1AN1
NM_207380FLJ433391
NM_173495PTCHD11
NM_138333FAM122A1
NM_012406PRDM41
NM_0011016761
NM_015144ZCCHC141
NM_001008738FNIP11
NM_133372FNIP11
NM_004660DDX3Y1
NM_198904GABRG21
NM_203390RBM12B1
NM_182749N6AMT11
NM_013240N6AMT11
NM_000016ACADM1
NM_018367PHCA1
NM_001039709CBFA2T21
NM_001032999CBFA2T21
NM_005093CBFA2T21
NM_177925H2AFJ1
NM_032538TTBK11
XM_001132728LOC7323141
XM_001128520LOC7287991
NM_007007CPSF61
NM_174909TMEM1671
NM_022470ZMAT31
NM_152240ZMAT31
XM_001127757LOC7309281
XM_001126412LOC7280401
NM_181900STARD51
NM_0011051931
NM_0011051951
NM_0011051941
NM_152698FLJ383771
NM_001233CAV21
NM_198212CAV21
NM_019051MRPL501
NM_015891CDC401
NM_024529CDC731
NM_016817OAS21
NM_012157FBXL21
NM_015913TXNDC121
NM_0011006241
NM_031922REPS11
NM_032295SLC37A31
NM_207113SLC37A31
NM_001013626LOC2861871
NM_012334MYO101
NM_153365TAPT11
NM_020144PAPOLB1
NM_003074SMARCC11
NM_006930SKP1A1
NM_170731BDNF1
NM_001709BDNF1
NM_170732BDNF1
NM_170733BDNF1
NM_170734BDNF1
NM_170735BDNF1
NM_006713SUB11
NM_004857AKAP51
NM_194429FGFR1OP1
NM_007045FGFR1OP1
NM_006022TSC22D11
NM_183422TSC22D11
NM_016281TAOK31
NM_015576ERC21
NM_003326TNFSF41
NM_018640LMO31
NM_001001395LMO31
NM_005509DMXL11
NM_006931SLC2A31
NM_178445CCRL11
NM_016557CCRL11
NM_001033521CSTF11
NM_001033522CSTF11
NM_001324CSTF11
NM_032189ATP11A1
NM_015205ATP11A1
NM_020726NLN1
NM_015172BAT2D11
NM_018151RIF11
NM_001039887C19orf551
NM_0207221
NM_002154HSPA41
NM_000349STAR1
NM_001007243STAR1
NM_001278CHUK1
NM_144571CNOT6L1
NM_022783DEPDC61
NM_025009CEP1351
NM_207672GRIPAP11
NM_198935SS18L11
NM_0209231
NM_004397DDX61
NM_002349LY751
NM_018230NUP1331
NM_000811GABRA61
NM_030787CFHR51
NM_003986BBOX11
NM_004782SNAP291
NM_001012755MCART61
NM_0011004211
NM_0011004201
NM_017447C21orf911
NM_0011008291
NM_015079TBC1D2B1
NM_003478CUL51
NM_000431MVK1

Immunostimulatory motif search results


UGUGU - Judge et al. Sequence-dependent stimulation of the mammalian innate immune response by synthetic siRNA. Nat Biotechnol. 2005 Apr;23(4):457-62. (PMID: 15778705)
No Immunostimulatory motif found (UGUGU).

GUCCUUCAA - Hornung et al. Sequence-specific potent induction of IFN-alpha by short interfering RNA in plasmacytoid dendritic cells through TLR7. Nat Med. 2005 Mar;11(3):263-70. Epub 2005 Feb 20. (PMID: 15723075)
No Immunostimulatory motif found (GUCCUUCAA).



Settings used for search

Scores were calculated using scoring scheme SS1
Using AVG scoring mode.

Hit scores

ParameterSpec. Score cut-offColourComment
Hit to same geneColourHits to the same accession or genes with 100 percent identity (i.e. likely transcript variants). It is advisable to always check the genes hit.
High scoring hit≥80ColourHits are very likely to cause an off-target effect
Medium scoring hit<80¸≥40ColourHits with a small chance of causing an off target effect.
Low scoring hitColourHits very unlikely to cause an off-target effect

The mismatches are colour coded based on the weighting of that position.

Cut-offColour
MatchColour
Wobble base pairs (G-U)Colour
Critical bases (none)Colour
0.6 bitsColour
0.4 bitsColour
0.2 bitsColour

About SpecificityServer

SpecificityServer is designed to help you identify potential non-specific matches to your siRNA. It incorporates the latest information about non-specific matches (sequence-specific only).

Designed by: Alistair Chalk, Quan Du, Zicai Liang and Erik L.L. Sonnhammer


For more details about the algorithm "siRNA specificity searching incorporating mismatch tolerance data" Bioinformatics (2008) 24 (10): 1316-1317