VIRsiRNAdb

SpecificityServer - An siRNA design program for determining siRNA specificity
Automatic recommendation
Not OK - siRNA is not specific

141 hits were found for GCAUCAUCAUCAUAAUCAA (37 guide strand hits and 104 sense strand hits.)

Hits to Guide strand

Accession

Gene

Start

End

Details of mismatches

Spec. Score

Mismatches

Contiguous

Jackson style specificity

Hits similar gene

HSP Score

HSP % Identity

HSP length

Gene Length

1

2

3

4

5

6

7

8

9

10

11

12

13

14

15

16

17

18

19

NM_001240

CCNT1

1874

1892

u

C

A

U

C

A

U

C

A

U

C

A

U

A

A

U

C

A

c

93

2

17

abc

false

<90%

2568

NM_001240

CCNT1

1874

1892

u

C

A

U

C

A

U

C

A

U

C

A

U

A

A

U

C

A

c

93

2

17

abc

false

<90%

2568

NM_022058

SLC4A10

743

761

G

C

A

U

C

A

U

C

A

U

C

A

g

A

A

U

C

A

g

84

2

12

false

<90%

3929

XM_001125695

LOC727743

344

362

c

C

A

U

C

A

U

C

A

U

C

A

U

c

A

U

C

A

c

73

3

12

c

false

<90%

714

XM_001132504

LOC732278

344

362

c

C

A

U

C

A

U

C

A

U

C

A

U

c

A

U

C

A

c

73

3

12

c

false

<90%

714

NM_152647

C15orf33

1757

1775

u

C

A

U

C

A

U

C

A

U

C

A

U

c

A

U

C

A

c

73

3

12

c

false

<90%

1990

NM_152647

C15orf33

1757

1775

x

C

A

U

C

A

U

C

A

U

C

A

U

c

A

U

C

A

c

73

3

12

c

false

<90%

1990

NM_178468

FAM83C

3009

3027

u

C

A

U

C

A

U

C

A

U

C

A

U

c

A

U

C

A

u

73

3

12

c

false

<90%

3188

NM_178468

FAM83C

3012

3030

u

C

A

U

C

A

U

C

A

U

C

A

U

c

A

U

C

A

u

73

3

12

c

false

<90%

3188

NM_178468

FAM83C

3009

3027

u

C

A

U

C

A

U

C

A

U

C

A

U

c

A

U

C

A

u

73

3

12

c

false

<90%

3188

NM_178468

FAM83C

3012

3030

u

C

A

U

C

A

U

C

A

U

C

A

U

c

A

U

C

A

u

73

3

12

c

false

<90%

3188

NM_207499

FLJ41841

1062

1080

u

C

A

U

C

A

U

C

A

U

C

A

U

c

A

U

C

A

c

73

3

12

c

false

<90%

3230

XM_938097

DKFZP686C2281

152

170

u

C

A

U

C

A

U

C

A

U

C

A

U

c

A

U

C

A

c

73

3

12

c

false

<90%

3930

XM_927469

DKFZP686C2281

152

170

u

C

A

U

C

A

U

C

A

U

C

A

U

c

A

U

C

A

c

73

3

12

c

false

<90%

3930

NM_145003

TSNARE1

1619

1637

u

C

A

U

C

A

U

C

A

U

C

A

U

c

A

U

C

g

c

70

4

12

c

false

<90%

1912

NM_004781

VAMP3

381

399

u

C

A

U

C

A

U

C

A

U

C

A

U

c

A

U

C

g

u

70

4

12

c

false

<90%

2225

NM_032242

PLXNA1

3009

3027

c

C

A

U

C

A

U

C

A

U

C

A

a

c

A

U

C

A

A

68

3

11

false

<90%

9040

NM_004858

SLC4A8

835

853

G

C

A

U

C

A

U

C

A

U

C

A

g

A

A

U

g

A

A

66

2

12

false

<90%

4010

NM_001039960

SLC4A8

835

853

G

C

A

U

C

A

U

C

A

U

C

A

g

A

A

U

g

A

A

66

2

12

false

<90%

5218

NM_006150

LMO6

1562

1580

c

C

A

c

C

A

U

C

A

U

C

A

U

A

A

U

C

A

c

56

3

14

bc

false

<90%

1990

NM_002095

GTF2E2

344

362

u

C

A

U

C

A

U

C

A

U

C

A

U

c

g

U

C

A

A

53

3

12

c

false

<90%

1560

NM_004781

VAMP3

378

396

u

C

u

U

C

A

U

C

A

U

C

A

U

c

A

U

C

A

u

53

4

10

c

false

<90%

2225

XM_001129032

TMEM16J

689

707

c

C

A

U

C

A

U

C

A

U

C

A

U

g

A

c

C

A

A

52

3

12

c

false

<90%

2208

NM_001012302

TMEM16J

1251

1269

c

C

A

U

C

A

U

C

A

U

C

A

U

g

A

c

C

A

A

52

3

12

c

false

<90%

2879

NM_017882

CLN6

450

468

G

C

A

U

C

A

U

C

A

U

C

u

U

c

A

U

C

A

u

41

3

11

false

<90%

2227

NM_020342

SLC39A10

630

648

G

C

A

U

C

A

U

C

A

U

C

u

U

g

A

U

C

A

u

41

3

11

false

<90%

5231

NM_201378

PLEC1

10808

10826

G

C

A

U

g

A

U

C

A

U

C

A

U

c

A

U

C

A

u

24

3

8

c

false

<90%

14626

NM_201381

PLEC1

10828

10846

G

C

A

U

g

A

U

C

A

U

C

A

U

c

A

U

C

A

u

24

3

8

c

false

<90%

14646

NM_201382

PLEC1

10857

10875

G

C

A

U

g

A

U

C

A

U

C

A

U

c

A

U

C

A

u

24

3

8

c

false

<90%

14675

NM_201383

PLEC1

10871

10889

G

C

A

U

g

A

U

C

A

U

C

A

U

c

A

U

C

A

u

24

3

8

c

false

<90%

14689

NM_201379

PLEC1

10933

10951

G

C

A

U

g

A

U

C

A

U

C

A

U

c

A

U

C

A

u

24

3

8

c

false

<90%

14751

NM_000445

PLEC1

10937

10955

G

C

A

U

g

A

U

C

A

U

C

A

U

c

A

U

C

A

u

24

3

8

c

false

<90%

14755

NM_201384

PLEC1

10979

10997

G

C

A

U

g

A

U

C

A

U

C

A

U

c

A

U

C

A

u

24

3

8

c

false

<90%

14797

NM_201380

PLEC1

11431

11449

G

C

A

U

g

A

U

C

A

U

C

A

U

c

A

U

C

A

u

24

3

8

c

false

<90%

15249

NR_003192

SNHG8

911

929

u

C

A

U

u

A

U

C

A

U

C

A

U

A

A

U

g

A

A

23

3

11

c

false

<90%

5904

NM_152647

C15orf33

1766

1784

u

C

A

U

C

A

U

C

A

c

C

A

U

c

A

U

C

A

A

-4

3

8

c

false

<90%

1990

NM_152647

C15orf33

1766

1784

u

C

A

U

C

A

U

C

A

c

C

A

U

c

A

U

C

A

A

-4

3

8

c

false

<90%

1990

Hits to Sense strand

Accession

Gene

Start

End

Details of mismatches

Spec. Score

Mismatches

Contiguous

Jackson style specificity

Hits similar gene

HSP Score

HSP % Identity

HSP length

Gene Length

1

2

3

4

5

6

7

8

9

10

11

12

13

14

15

16

17

18

19

NM_018683

ZNF313

656

674

U

g

G

A

U

U

A

U

G

A

U

G

u

U

G

A

U

G

a

73

3

10

false

<90%

2478

XR_018600

LOC442621

719

737

U

g

G

A

U

U

A

U

G

A

U

G

A

a

G

A

U

G

C

69

2

11

c

false

<90%

974

XR_016071

LOC729992

724

742

U

g

G

A

U

U

A

U

G

A

U

G

A

a

G

A

U

G

C

69

2

11

c

false

<90%

979

XR_017519

LOC442730

591

609

U

g

G

A

U

U

A

U

G

A

U

G

A

a

G

A

U

G

C

69

2

11

c

false

<90%

1068

XR_018040

LOC442730

591

609

U

g

G

A

U

U

A

U

G

A

U

G

A

a

G

A

U

G

C

69

2

11

c

false

<90%

1068

XR_018911

LOC442730

591

609

U

g

G

A

U

U

A

U

G

A

U

G

A

a

G

A

U

G

C

69

2

11

c

false

<90%

1068

XR_016561

LOC399950

628

646

U

g

G

A

U

U

A

U

G

A

U

G

A

a

G

A

U

G

C

69

2

11

c

false

<90%

1082

XR_018475

LOC649058

633

651

U

g

G

A

U

U

A

U

G

A

U

G

A

a

G

A

U

G

C

69

2

11

c

false

<90%

1087

XR_016782

LOC642818

622

640

U

g

G

A

U

U

A

U

G

A

U

G

A

a

G

A

U

G

C

69

2

11

c

false

<90%

1135

XR_019635

LOC649079

622

640

U

g

G

A

U

U

A

U

G

A

U

G

A

a

G

A

U

G

C

69

2

11

c

false

<90%

1135

XR_019328

LOC401648

616

634

U

g

G

A

U

U

A

U

G

A

U

G

A

a

G

A

U

G

C

69

2

11

c

false

<90%

1233

XR_017482

LOC401648

616

634

U

g

G

A

U

U

A

U

G

A

U

G

A

a

G

A

U

G

C

69

2

11

c

false

<90%

1233

XR_015950

LOC731777

713

731

U

g

G

A

U

U

A

U

G

A

U

G

A

a

G

A

U

G

C

69

2

11

c

false

<90%

1235

XR_017588

LOC645515

713

731

U

g

G

A

U

U

A

U

G

A

U

G

A

a

G

A

U

G

C

69

2

11

c

false

<90%

1235

NR_002183

FAM10A4

692

710

U

c

G

A

U

U

A

U

G

A

U

G

A

a

G

A

U

G

C

69

2

11

c

false

<90%

1599

NR_002199

FAM10A6

775

793

U

g

G

A

U

U

A

U

G

A

U

G

A

a

G

A

U

G

C

69

2

11

c

false

<90%

1662

NR_002198

FAM10A7

715

733

U

g

G

A

U

U

A

U

G

A

U

G

A

a

G

A

U

G

C

69

2

11

c

false

<90%

2597

NM_003932

ST13

776

794

U

g

G

A

U

U

A

U

G

A

U

G

A

a

G

A

U

G

C

69

2

11

c

false

<90%

3214

XM_942276

DHX40

992

1010

U

U

G

A

U

U

A

U

G

A

U

u

A

U

G

A

U

G

u

61

2

11

false

<90%

3058

NM_024612

DHX40

1043

1061

U

U

G

A

U

U

A

U

G

A

U

u

A

U

G

A

U

G

u

61

2

11

false

<90%

3656

NM_025132

WDR19

1874

1892

U

U

G

c

U

U

A

U

G

A

U

G

A

U

G

A

U

a

a

55

3

13

c

false

<90%

4534

XR_018825

LOC442233

530

548

U

U

G

A

U

U

A

U

G

A

U

G

A

U

G

g

c

u

u

42

4

15

c

false

<90%

1221

XR_016429

LOC442233

530

548

U

U

G

A

U

U

A

U

G

A

U

G

A

U

G

g

c

u

u

42

4

15

c

false

<90%

1221

NM_002158

FOXN2

1380

1398

U

U

G

A

U

U

A

U

G

A

a

G

A

U

G

A

U

c

C

36

2

10

c

false

<90%

5472

NM_016216

DBR1

1740

1758

a

U

G

A

U

g

A

U

G

A

U

G

A

U

G

A

U

G

C

34

2

13

bc

false

<90%

2667

NM_018307

RHOT1

1058

1076

U

U

G

g

U

U

A

U

G

A

U

G

A

U

G

A

c

c

u

32

4

12

c

false

<90%

3089

NM_001033566

RHOT1

1058

1076

U

U

G

g

U

U

A

U

G

A

U

G

A

U

G

A

c

c

u

32

4

12

c

false

<90%

3213

NM_001033568

RHOT1

1058

1076

U

U

G

g

U

U

A

U

G

A

U

G

A

U

G

A

c

c

u

32

4

12

c

false

<90%

3309

NM_001009959

KIAA1189

751

769

U

U

G

A

U

g

A

U

G

A

U

G

A

U

G

A

U

G

a

31

2

12

bc

false

<90%

3722

NM_020711

KIAA1189

819

837

U

U

G

A

U

g

A

U

G

A

U

G

A

U

G

A

U

G

a

31

2

12

bc

false

<90%

3790

NM_002834

PTPN11

3316

3334

U

U

G

A

U

g

A

U

G

A

U

G

A

U

G

A

U

G

a

31

2

12

bc

false

<90%

6300

XM_496355

LOC440577

584

602

a

U

G

A

U

g

A

U

G

A

U

G

A

U

G

A

U

G

a

29

3

12

bc

false

<90%

1060

XM_001130897

LOC440577

584

602

a

U

G

A

U

g

A

U

G

A

U

G

A

U

G

A

U

G

a

29

3

12

bc

false

<90%

1060

NM_018952

HOXB6

1571

1589

a

U

G

A

U

g

A

U

G

A

U

G

A

U

G

A

U

G

a

29

3

12

bc

false

<90%

1686

NM_018952

HOXB6

1574

1592

a

U

G

A

U

g

A

U

G

A

U

G

A

U

G

A

U

G

a

29

3

12

bc

false

<90%

1686

NM_018952

HOXB6

1577

1595

a

U

G

A

U

g

A

U

G

A

U

G

A

U

G

A

U

G

a

29

3

12

bc

false

<90%

1686

NM_002044

GALK2

1910

1928

g

U

G

A

U

g

A

U

G

A

U

G

A

U

G

A

U

G

a

29

3

12

bc

false

<90%

3121

NM_001001556

GALK2

1997

2015

g

U

G

A

U

g

A

U

G

A

U

G

A

U

G

A

U

G

a

29

3

12

bc

false

<90%

3208

NM_000720

CACNA1D

110

128

a

U

G

A

U

g

A

U

G

A

U

G

A

U

G

A

U

G

a

29

3

12

bc

false

<90%

7193

NM_000720

CACNA1D

113

131

a

U

G

A

U

g

A

U

G

A

U

G

A

U

G

A

U

G

a

29

3

12

bc

false

<90%

7193

NM_005188

CBL

1493

1511

a

U

G

A

U

g

A

U

G

A

U

G

A

U

G

A

U

G

a

29

3

12

bc

false

<90%

11242

NM_020706

SFRS15

1049

1067

U

U

G

A

c

U

A

U

G

A

U

G

A

U

G

A

g

c

C

22

3

11

c

false

<90%

3882

NM_018952

HOXB6

1580

1598

U

c

G

A

U

g

A

U

G

A

U

G

A

U

G

A

U

G

a

20

3

12

bc

false

<90%

1686

NM_000720

CACNA1D

116

134

U

g

G

A

U

g

A

U

G

A

U

G

A

U

G

A

U

G

a

20

3

12

bc

false

<90%

7193

NM_178426

ARNT

283

301

U

g

G

A

U

U

u

U

G

A

U

G

A

U

G

A

U

G

g

17

3

11

bc

false

<90%

3563

NM_178427

ARNT

283

301

U

g

G

A

U

U

u

U

G

A

U

G

A

U

G

A

U

G

g

17

3

11

bc

false

<90%

4801

NM_001668

ARNT

283

301

U

g

G

A

U

U

u

U

G

A

U

G

A

U

G

A

U

G

g

17

3

11

bc

false

<90%

4846

NM_001018089

NARG2

1256

1274

U

g

G

A

U

U

u

U

G

A

U

G

A

U

G

A

U

G

u

17

3

11

bc

false

<90%

7049

NM_024611

NARG2

1416

1434

U

g

G

A

U

U

u

U

G

A

U

G

A

U

G

A

U

G

u

17

3

11

bc

false

<90%

7209

NM_000038

APC

5651

5669

U

a

G

A

U

U

u

U

G

A

U

G

A

U

G

A

U

G

a

17

3

11

bc

false

<90%

10719

NM_000038

APC

5663

5681

U

a

G

A

U

U

u

U

G

A

U

G

A

U

G

A

U

G

a

17

3

11

bc

false

<90%

10719

NM_014286

FREQ

1236

1254

U

U

a

A

U

U

A

U

G

A

g

G

A

U

G

A

U

G

a

14

3

7

c

false

<90%

4341

NM_015216

HISPPD1

2815

2833

U

U

G

A

U

a

A

U

G

A

U

G

A

U

G

A

a

c

C

10

3

10

c

false

<90%

5293

XR_018268

LOC647968

670

688

U

U

G

A

U

U

c

U

G

A

U

G

A

a

G

A

U

G

a

9

3

6

c

false

<90%

1235

XR_016578

LOC400352

670

688

U

U

G

A

U

U

c

U

G

A

U

G

A

a

G

A

U

G

a

9

3

6

c

false

<90%

1634

NM_005791

MPHOSPH10

1071

1089

U

U

G

A

U

U

c

U

G

A

U

G

A

a

G

A

U

G

a

9

3

6

c

false

<90%

2503

NM_145695

DGKB

617

635

U

U

G

A

c

U

A

U

G

A

U

c

A

U

G

A

U

G

g

9

3

6

false

<90%

3172

NM_004247

EFTUD2

81

99

U

U

G

A

U

U

c

U

G

A

U

G

A

a

G

A

U

G

a

9

3

6

c

false

<90%

3332

NM_004080

DGKB

617

635

U

U

G

A

c

U

A

U

G

A

U

c

A

U

G

A

U

G

g

9

3

6

false

<90%

3926

NM_005333

HCCS

909

927

U

U

G

A

U

U

A

U

u

A

U

G

A

U

G

g

U

G

g

8

3

8

c

false

<90%

2331

NM_012143

TFIP11

291

309

U

U

G

A

U

g

A

U

G

A

U

G

A

U

G

A

c

G

a

8

3

10

c

false

<90%

2864

NM_001008697

TFIP11

368

386

U

U

G

A

U

g

A

U

G

A

U

G

A

U

G

A

c

G

a

8

3

10

c

false

<90%

2941

NM_000057

BLM

957

975

U

U

G

A

U

g

A

U

G

A

U

G

A

U

u

A

U

G

a

7

3

8

c

false

<90%

4528

NM_000057

BLM

969

987

U

U

G

A

U

g

A

U

G

A

U

G

A

U

u

A

U

G

a

7

3

8

c

false

<90%

4528

NM_024516

C16orf53

516

534

U

U

G

A

U

U

u

U

G

A

U

G

A

U

G

A

g

c

C

7

3

9

c

false

<90%

1164

XM_941889

LOC652446

74

92

U

U

G

A

U

g

A

U

G

A

U

G

A

U

G

g

U

G

a

5

3

9

c

false

<90%

306

XM_001127768

LOC648708

655

673

U

U

G

A

U

g

A

U

G

A

U

G

A

U

G

g

U

G

a

5

3

9

c

false

<90%

786

XR_018527

LOC648708

643

661

U

U

G

A

U

g

A

U

G

A

U

G

A

U

G

g

U

G

a

5

3

9

c

false

<90%

1250

XR_018384

LOC648269

742

760

U

U

G

A

U

g

A

U

G

A

U

G

A

U

G

g

U

G

a

5

3

9

c

false

<90%

1334

XM_290482

FAM21B

1088

1106

U

U

G

A

U

g

A

U

G

A

U

G

A

U

G

g

U

G

a

5

3

9

c

false

<90%

4326

NM_000057

BLM

1777

1795

U

U

G

A

U

g

A

U

G

A

U

G

A

U

G

A

c

u

g

5

4

10

c

false

<90%

4528

NM_015262

FAM21C

1451

1469

U

U

G

A

U

g

A

U

G

A

U

G

A

U

G

g

U

G

a

5

3

9

c

false

<90%

4621

NM_001005751

LOC387680

1434

1452

U

U

G

A

U

g

A

U

G

A

U

G

A

U

G

g

U

G

a

5

3

9

c

false

<90%

4735

NM_000038

APC

5645

5663

U

U

G

A

U

g

A

U

G

A

U

G

A

U

G

u

U

G

a

5

3

9

c

false

<90%

10719

NM_000038

APC

5657

5675

U

U

G

A

U

g

A

U

G

A

U

G

A

U

G

u

U

G

a

5

3

9

c

false

<90%

10719

NM_001219

CALU

197

215

U

U

G

A

U

U

A

U

G

A

c

c

A

U

G

A

U

G

C

4

2

10

false

<90%

3320

XR_019515

LOC339858

119

137

a

a

c

A

U

g

A

U

G

A

U

G

A

U

G

A

U

G

C

3

4

13

bc

false

<90%

574

XR_017649

LOC339858

119

137

a

a

c

A

U

g

A

U

G

A

U

G

A

U

G

A

U

G

C

3

4

13

bc

false

<90%

574

XM_001131613

LOC729882

642

660

a

c

a

A

U

g

A

U

G

A

U

G

A

U

G

A

U

G

C

3

4

13

bc

false

<90%

687

XM_001130448

LOC731692

642

660

a

c

a

A

U

g

A

U

G

A

U

G

A

U

G

A

U

G

C

3

4

13

bc

false

<90%

687

NM_020901

KIAA1542

428

446

U

c

a

A

U

U

c

U

G

A

U

G

A

U

G

A

U

G

C

2

3

12

bc

false

<90%

5521

NM_005021

ENPP3

2335

2353

U

U

G

A

U

U

A

U

a

A

U

u

A

U

G

A

U

G

g

1

3

8

false

<90%

3180

NM_001002909

GPATCH8

328

346

U

U

G

A

U

U

A

U

G

c

U

G

A

a

G

A

U

G

C

-2

2

9

c

false

<90%

6877

NM_138467

TYW3

808

826

U

U

G

A

a

a

A

U

G

A

U

G

A

U

G

A

U

G

a

-19

3

12

bc

false

<90%

2380

NM_004537

NAP1L1

1164

1182

U

U

G

A

a

g

A

U

G

A

U

G

A

U

G

A

U

G

a

-19

3

12

bc

false

<90%

2908

NM_139207

NAP1L1

1164

1182

U

U

G

A

a

g

A

U

G

A

U

G

A

U

G

A

U

G

a

-19

3

12

bc

false

<90%

3582

XM_001131613

LOC729882

645

663

a

U

G

A

c

a

A

U

G

A

U

G

A

U

G

A

U

G

a

-21

4

12

bc

false

<90%

687

XM_001130448

LOC731692

645

663

a

U

G

A

c

a

A

U

G

A

U

G

A

U

G

A

U

G

a

-21

4

12

bc

false

<90%

687

NM_025139

ARMC9

1812

1830

U

U

G

A

a

U

c

U

G

A

U

G

A

U

G

A

U

G

a

-22

3

11

bc

false

<90%

2178

NM_000057

BLM

963

981

U

U

G

A

a

U

u

U

G

A

U

G

A

U

G

A

U

G

a

-22

3

11

bc

false

<90%

4528

NM_000057

BLM

975

993

U

U

G

A

a

U

u

U

G

A

U

G

A

U

G

A

U

G

a

-22

3

11

bc

false

<90%

4528

NM_052958

C8orf34

2333

2351

U

U

G

A

U

a

A

U

G

A

a

G

A

U

G

A

U

G

C

-24

2

8

c

false

<90%

3669

NM_000057

BLM

1783

1801

a

U

G

A

c

U

u

U

G

A

U

G

A

U

G

A

U

G

a

-24

4

11

bc

false

<90%

4528

XM_001133539

LOC732427

17

35

U

U

G

A

U

g

A

U

G

A

g

G

A

U

G

A

U

G

g

-29

3

7

c

false

<90%

432

NM_017637

BNC2

2098

2116

U

U

G

A

U

g

A

U

G

A

a

G

A

U

G

A

U

G

a

-29

3

7

c

false

<90%

12926

XM_496355

LOC440577

593

611

U

U

G

A

U

g

A

a

G

A

U

G

A

U

G

A

U

G

a

-30

3

10

bc

false

<90%

1060

XM_001130897

LOC440577

593

611

U

U

G

A

U

g

A

a

G

A

U

G

A

U

G

A

U

G

a

-30

3

10

bc

false

<90%

1060

NM_000350

ABCA4

5848

5866

U

U

G

A

U

g

A

a

G

A

U

G

A

U

G

A

U

G

u

-30

3

10

bc

false

<90%

7326

NM_020818

KIAA1409

2490

2508

U

U

G

A

U

U

g

U

G

A

a

G

A

U

G

A

U

G

a

-32

3

7

c

false

<90%

8471

NM_001032396

PJA1

784

802

U

U

G

A

U

a

c

U

G

A

U

G

A

U

G

A

U

G

a

-34

3

11

bc

false

<90%

2402

NM_145119

PJA1

1110

1128

U

U

G

A

U

a

c

U

G

A

U

G

A

U

G

A

U

G

a

-34

3

11

bc

false

<90%

2728

NM_002044

GALK2

1919

1937

U

U

G

A

U

g

A

U

G

g

U

G

A

U

G

A

U

G

a

-51

3

8

bc

false

<90%

3121

NM_001001556

GALK2

2006

2024

U

U

G

A

U

g

A

U

G

g

U

G

A

U

G

A

U

G

a

-51

3

8

bc

false

<90%

3208

NR_002836

PGM5P2

1639

1657

U

U

G

A

U

g

A

U

G

g

U

G

A

U

G

A

U

G

u

-51

3

8

bc

false

<90%

1988

---

3 prime UTR Seed matches

Hits to same gene : 0
Hits to other genes : 1480
View matched accessions

3 prime seed match details

Accession	Gene name	Hits to this gene
NM_017644	KLHL24	3
NM_007249	KLF12	3
NM_012164	FBXW2	3
NM_001009909	LUZP2	3
NM_017759	FLJ20309	3
NM_152835	PDIK1L	3
NM_002221	ITPKB	3
NM_001076786	QSER1	2
NM_020390	EIF5A2	2
NM_080872	UNC5D	2
NM_152866	MS4A1	2
NM_021950	MS4A1	2
NM_176081	TRDMT1	2
NM_004412	TRDMT1	2
NM_176083	TRDMT1	2
NM_001626	AKT2	2
NM_016079	VPS24	2
NM_001005753	VPS24	2
NM_024052	C17orf39	2
NM_015156	RCOR1	2
NM_014830	ZBTB39	2
NM_001278	CHUK	2
NM_001204	BMPR2	2
NM_213609	FAM19A1	2
NM_052898	XKR4	2
NM_018940	PCDHB7	2
NM_024345	WDR32	2
NM_004264	SURB7	2
NM_207361	FREM2	2
NM_002604	PDE7A	2
NM_033390		2
XM_944900	LOC643770	2
XM_931792	LOC643770	2
NM_014240	LIMD1	2
NM_004852	ONECUT2	2
NM_172318	KCNG1	2
NM_006775	QKI	2
NM_014864	FAM20B	2
NM_153705	KDELC2	2
NM_015286	DMN	2
NM_145728	DMN	2
NM_152854	CD40	2
NM_001250	CD40	2
NM_173562	KCTD20	2
NM_138793	CANT1	2
NM_014331	SLC7A11	2
NM_198399	ARPP-21	2
NM_001025069	ARPP-21	2
NM_001025068	ARPP-21	2
NM_032458	PHF6	2
NM_152424	FAM123B	2
NM_021629	GNB4	2
NM_001776	ENTPD1	2
NM_001098175		2
NM_172128	CAMK2D	2
NM_172127	CAMK2D	2
NM_206925	CA12	2
NM_001218	CA12	2
NM_001010846	SHE	2
NM_017754	C6orf107	2
NM_001077484	SLC38A1	2
NM_030674	SLC38A1	2
NM_001001343	MGC27121	2
NM_024837	ATP8B4	2
NM_058170	OLFM3	2
NM_001037293	PALM2	2
NM_053016	PALM2	2
NM_001042383	CEP63	2
NM_001042400	CEP63	2
NM_025180	CEP63	2
NM_003149	STAC	2
XM_001133837	LOC732099	2
XM_001133987	LOC729681	2
NM_016156	MTMR2	2
NM_201278	MTMR2	2
NM_201281	MTMR2	2
NM_024577	SH3TC2	2
NM_019083	CCDC76	2
NM_001035513	SDHC	2
NM_001035512	SDHC	2
NM_003001	SDHC	2
NM_153365	TAPT1	2
NM_001002860	BTBD7	2
NM_015326	SRGAP2	2
XM_938689	KIAA1671	2
XM_371461	KIAA1671	2
NM_207454	FLJ44815	2
NM_015533	DAK	2
NM_007271	STK38	2
NM_003298	NR2C2	2
NM_020760	HECW2	2
NM_024761	MOBKL2B	2
NM_007270	FKBP9	2
NM_153442	GPR26	2
NM_002033	FUT4	2
NM_181489	ZNF445	2
NM_153256	C10orf47	2
NM_017415	KLHL3	2
NM_004171	SLC1A2	2
NM_004859	CLTC	2
NM_018566	YOD1	2
NM_001042574	CRTC3	2
NM_022769	CRTC3	2
NM_001005210	LRRC55	2
XM_001133760	ZNF519	2
NM_015328	KIAA0828	2
NM_003387	WIPF1	2
NM_001077269	WIPF1	2
NM_006166	NFYB	2
NM_207444	FLJ35695	1
NM_004991	MDS1	1
NM_003762	VAMP4	1
NM_171982	TRIM35	1
XM_941142	FTO	1
NM_001080432	FTO	1
NM_002993	CXCL6	1
NM_144964	RG9MTD3	1
NM_001077700	MIER1	1
NM_001077701	MIER1	1
NM_020948	MIER1	1
NM_003256	TIMP4	1
NM_022091	ASCC3	1
XM_209597	LOC285407	1
XM_939967	LOC285407	1
XM_001126071	LOC730490	1
XM_001130605	LOC729556	1
NM_014106	ZNF770	1
NM_015204		1
NM_139177	SLC39A11	1
NM_014637	MTFR1	1
NM_006754	SYPL1	1
NM_182715	SYPL1	1
NM_194272	RBPMS2	1
NM_004273	CHST3	1
NM_138426	GLCCI1	1
NM_144632	TMEM182	1
NM_022906		1
NM_030576	LIMD2	1
NM_018370	DRAM	1
NM_002053	GBP1	1
NM_018284	GBP3	1
NM_000390	CHM	1
NM_175078	KRT77	1
NM_000189	HK2	1
NM_152760	FLJ30934	1
NM_004667	HERC2	1
NM_017738	C9orf39	1
NM_015419	MXRA5	1
NM_173552	C3orf58	1
NM_003045	SLC7A1	1
NM_024087	ASB9	1
NM_006136	CAPZA2	1
NM_030647	JHDM1D	1
NM_002877	RAD51L1	1
NM_001085368		1
NM_001009960	ZNF655	1
NM_001083956		1
NM_138494	ZNF655	1
NM_006113	VAV3	1
NM_001079874	VAV3	1
NM_017776	ZNF673	1
NM_022374	ARL6IP2	1
NM_001111113		1
NM_005339	HIP2	1
NM_001111112		1
NM_020353	PLSCR4	1
NM_002015	FOXO1A	1
NM_000544	TAP2	1
NM_030787	CFHR5	1
NM_001040450	FAM63B	1
NM_001040453	FAM63B	1
NM_021128	POLR2L	1
NM_001009554	MFAP3L	1
NM_021647	MFAP3L	1
NM_178566	ZDHHC21	1
NM_017651	AHI1	1
NM_001013406	KRIT1	1
NM_004912	KRIT1	1
NM_194454	KRIT1	1
NM_194456	KRIT1	1
NM_194455	KRIT1	1
NM_022351	EFCBP1	1
NM_020673	RAB22A	1
NM_032980	DTNA	1
NM_001390	DTNA	1
NM_032975	DTNA	1
NM_033027	AXUD1	1
NM_153711	FAM26E	1
NM_006187	OAS3	1
NM_198581	ZC3H6	1
NM_021628	ALOXE3	1
NM_001030006	AP2B1	1
NM_001282	AP2B1	1
NM_139076	CCDC98	1
XM_001127175	LOC728320	1
NM_032446	MEGF10	1
NM_001014380	KATNAL1	1
NM_032116	KATNAL1	1
NM_177966	2'-PDE	1
NM_080760	DACH1	1
NM_080759	DACH1	1
NM_004392	DACH1	1
NM_133328	DEDD2	1
NM_147202	C9orf25	1
NM_001085451		1
NM_138318	KCNK10	1
NM_138317	KCNK10	1
NM_021161	KCNK10	1
NM_004598	SPOCK1	1
NM_002655	PLAG1	1
NM_018899	PCDHAC2	1
NM_018900	PCDHA1	1
NM_018902	PCDHA11	1
NM_031849	PCDHA6	1
NM_018905	PCDHA2	1
NM_018904	PCDHA13	1
NM_031860	PCDHA10	1
NM_018907	PCDHA4	1
NM_018909	PCDHA6	1
NM_018910	PCDHA7	1
NM_018911	PCDHA8	1
NM_018906	PCDHA3	1
NM_018903	PCDHA12	1
NM_018898	PCDHAC1	1
NM_031857	PCDHA9	1
NM_031411	PCDHA1	1
NM_018908	PCDHA5	1
NM_018901	PCDHA10	1
NM_176815	DHFRL1	1
NM_001089595		1
NM_001039802	CDC42	1
NM_001791	CDC42	1
NM_001982	ERBB3	1
NM_033035	TSLP	1
NM_138551	TSLP	1
NM_001167	BIRC4	1
NM_000891	KCNJ2	1
NM_004978	KCNC4	1
NM_014035	SNX24	1
NM_001013650	LOC389151	1
NM_171998	RAB39B	1
NM_145687	MAP4K4	1
NM_145686	MAP4K4	1
NM_004834	MAP4K4	1
NM_177457	LYNX1	1
NM_177477	LYNX1	1
NM_177476	LYNX1	1
NM_172212	CSF1	1
XM_001133620	LOC731895	1
NM_001080396	LOC728215	1
NM_173851	SLC30A8	1
NM_016937	POLA1	1
NM_003472	DEK	1
XM_001127597	FLJ32810	1
XM_001127587	FLJ32810	1
XM_925815	FLJ32810	1
XM_001127637	FLJ32810	1
XM_001127623	FLJ32810	1
NM_020823		1
NM_000153	GALC	1
NM_172388	NFATC1	1
NM_006162	NFATC1	1
NM_172389	NFATC1	1
NM_172387	NFATC1	1
NM_006661	PDE10A	1
NM_014600	EHD3	1
XM_001127087	FLJ43950	1
NM_003873	NRP1	1
NM_178558	ZNF680	1
NM_198844	ZPBP2	1
NM_199321	ZPBP2	1
NM_001012339	DNAJA5	1
NM_194283	DNAJA5	1
NM_006074	TRIM22	1
NM_005197	CHES1	1
NM_001085471		1
NM_005338	HIP1	1
NM_017944	USP47	1
NM_012392	PEF1	1
XM_944991	C14orf82	1
XM_498578	C14orf82	1
NM_033403		1
NM_007231	SLC6A14	1
NM_004697	PRPF4	1
NM_016480	PAIP2	1
NM_001033112	PAIP2	1
NM_004849	ATG5	1
NM_198709	ARSB	1
NM_016052	RRP15	1
NM_015507	EGFL6	1
NM_004672	MAP3K6	1
NM_001034915	RBM35A	1
XM_001126666	LOC730644	1
XM_933738	LOC646588	1
XM_946142	SHANK3	1
NM_001080420	SHANK3	1
NM_001047160	NET1	1
NM_005863	NET1	1
NM_018938	PCDHB4	1
NM_001039712	DEDD	1
NM_032998	DEDD	1
NM_001039711	DEDD	1
NM_017697	RBM35A	1
NM_003831	RIOK3	1
NM_005662	VDAC3	1
NM_053056	CCND1	1
NM_207338	LCTL	1
NM_148174	AZIN1	1
NM_015878	AZIN1	1
NM_005445	SMC3	1
NM_014319	LEMD3	1
XM_001126970	LOC728245	1
XM_001130724	LOC731771	1
NM_006924	SFRS1	1
NM_001078166	SFRS1	1
NM_002491	NDUFB3	1
NM_007159	SLMAP	1
NM_016441	CRIM1	1
XM_943429	LOC646484	1
XM_933646	LOC646484	1
NM_004591	CCL20	1
NM_022750	PARP12	1
NM_005121	THRAP1	1
NM_001039152	RGS21	1
NM_173658	ZNF660	1
NM_012464	TLL1	1
NM_019850	NGEF	1
NM_006156	NEDD8	1
NM_015344	LEPROTL1	1
NM_005840	SPRY3	1
NM_004270	CRSP9	1
NM_001100816		1
NM_004093	EFNB2	1
NM_014252	SLC25A15	1
NM_020347	LZTFL1	1
NM_016641	MIR16	1
NM_024496	C14orf4	1
NM_032151	PCBD2	1
NM_001040446	MTMR12	1
NM_020871	LRCH2	1
NM_134431	SLCO1A2	1
NM_014495	ANGPTL3	1
NM_001957	EDNRA	1
NM_004665	VNN2	1
NM_078488	VNN2	1
NM_006073	TRDN	1
NM_001003805	ATP5S	1
NM_001003803	ATP5S	1
NM_133646	ZAK	1
NM_138789	PIH1D2	1
NM_000259	MYO5A	1
NM_012417	PITPNC1	1
NM_181671	PITPNC1	1
NM_012081	ELL2	1
NM_177454	KIAA1946	1
NM_001012958	DISC1	1
NM_198460	GBP6	1
NM_203395	IYD	1
NM_198124	CSMD3	1
NM_198123	CSMD3	1
NM_052900	CSMD3	1
NM_152636	METT5D1	1
NM_033127	LZTR2	1
NM_020856	TSHZ3	1
NM_001008495	TMEM64	1
NM_005171	ATF1	1
NM_153218	C13orf31	1
NM_020200	PRTFDC1	1
NM_018639	WSB2	1
XM_941810	LOC284023	1
XM_929835	LOC284023	1
NM_002988	CCL18	1
NM_014166	MED4	1
NM_001029954	ARMETL1	1
NM_001024647	RAB3IP	1
NM_022456	RAB3IP	1
NM_175624	RAB3IP	1
NM_175625	RAB3IP	1
NM_175623	RAB3IP	1
NM_138715	MSR1	1
NM_138716	MSR1	1
NM_000389	CDKN1A	1
NM_078467	CDKN1A	1
NM_001098801		1
NM_152352	C18orf19	1
NM_031244	SIRT5	1
NM_001008781		1
XM_936538	FAT3	1
XM_926199	FAT3	1
NM_006020	ALKBH1	1
NM_014267	C11orf58	1
XM_940960	LOC651744	1
XM_928125	LOC645086	1
NM_014881	DCLRE1A	1
NM_017541	CRYGS	1
NM_024629	MLF1IP	1
XM_001129439	LOC730877	1
XM_001127905	LOC728196	1
NM_001007237	IGSF3	1
NM_001542	IGSF3	1
NM_207012	AP3M1	1
NM_012095	AP3M1	1
XM_927238	LOC643988	1
XM_936418	LOC647347	1
NM_181847	AMIGO2	1
NM_001012993	C9orf152	1
NM_003551	NME5	1
NM_001033087	C20orf133	1
NM_080676	C20orf133	1
NM_130438	DYRK1A	1
NM_101395	DYRK1A	1
NM_130437	DYRK1A	1
XM_938665	USP6NL	1
NM_001080491	USP6NL	1
XM_927409	USP6NL	1
XM_943800	USP6NL	1
NM_139278	LGI3	1
NM_003932	ST13	1
NM_033121	ANKRD13A	1
NM_007325	GRIA3	1
NM_000828	GRIA3	1
NM_145178	ATOH7	1
NM_003725	HSD17B6	1
NM_023930	KCTD14	1
NM_001008701	LPHN1	1
NM_014921	LPHN1	1
NM_003356	UCP3	1
NM_016089	ZNF589	1
NM_145659	IL27	1
NM_032352	BRMS1L	1
XM_001130700	LOC729580	1
XM_001126751	LOC730672	1
NM_152221	CSNK1E	1
NM_001894	CSNK1E	1
NM_005277	GPM6A	1
NM_201592	GPM6A	1
NM_201591	GPM6A	1
NM_181744	OPN5	1
NM_001030051	OPN5	1
NM_000733	CD3E	1
NM_138691	TMC1	1
NM_018293	ZNF654	1
XM_001126706	ZNF654	1
NM_172193	KLHDC1	1
NM_022776	OSBPL11	1
NM_003202	TCF7	1
NM_201632	TCF7	1
NM_213648	TCF7	1
NM_201634	TCF7	1
NM_017526	LEPROT	1
NM_032758	PHF5A	1
NM_004330	BNIP2	1
NM_022445	TPK1	1
NM_001042482	TPK1	1
NM_032467	ASPH	1
NM_020164	ASPH	1
NM_002417	MKI67	1
NM_001080498	EMR4	1
NM_001031717	CRELD1	1
NM_172240	WDR51B	1
NM_001015877	PHF6	1
NM_145055	C18orf25	1
NM_001008239	C18orf25	1
NM_148954	PSMB9	1
NM_002800	PSMB9	1
NM_017438	SETD4	1
NM_001112800		1
NM_021097	SLC8A1	1
NM_001112801		1
NM_001112802		1
NM_001018100	Gcom1	1
NM_152451	Gcom1	1
NM_018400	SCN3B	1
NM_001040151	SCN3B	1
NM_017850	C1orf109	1
NM_021198	CTDSP1	1
NM_001876	CPT1A	1
NM_014421	DKK2	1
NM_018351	FGD6	1
NM_030621	DICER1	1
NM_177438	DICER1	1
NM_003704	C4orf8	1
NM_033117	RBM18	1
NM_130391	PTPRD	1
NM_130393	PTPRD	1
NM_130392	PTPRD	1
NM_002839	PTPRD	1
NM_001040712	PTPRD	1
NM_032382	COG8	1
NM_013399	C16orf5	1
NM_003946	NOL3	1
NM_001569	IRAK1	1
NM_001025243	IRAK1	1
NM_001025242	IRAK1	1
NM_006486	FBLN1	1
NM_054033	FKBP1B	1
NM_004116	FKBP1B	1
NM_003165	STXBP1	1
NM_001032221	STXBP1	1
NM_020448	NPAL3	1
NM_001098270		1
NM_002409	MGAT3	1
NM_001100427		1
NM_021159	RAP1GDS1	1
NM_001100428		1
NM_001100429		1
NM_001100426		1
NM_001100430		1
XM_001131308	LOC730961	1
NM_001017395	TMCC1	1
NM_015008	TMCC1	1
NM_022493	NARFL	1
NM_015488	PNKD	1
NM_022572	PNKD	1
NM_032726	PLCD4	1
NM_017660	GATAD2A	1
NM_014911	AAK1	1
NM_144498	OSBPL2	1
NM_014835	OSBPL2	1
NM_152414	BHLHB5	1
NM_152219	GJC1	1
XM_001127362	KIAA0574	1
NM_006016	CD164	1
NM_001039693	FLJ37953	1
NM_014313	TMEM50A	1
NM_004302	ACVR1B	1
NM_001551	IGBP1	1
NM_018116	MSTO1	1
XM_001128287	LOC731059	1
NM_144582	TEX261	1
NM_032233	SETD3	1
NM_004767	GPR37L1	1
NM_003427	ZNF76	1
NM_017594	DIRAS2	1
NM_213568	SLC39A3	1
NM_001013662		1
NM_005233	EPHA3	1
NM_001031617	COX19	1
NM_018146	RNMTL1	1
NM_194286	KIAA1853	1
NM_016577	RAB6B	1
NM_003713	PPAP2B	1
NM_177414	PPAP2B	1
NM_078628	MSL3L1	1
NM_000252	MTM1	1
NM_131916	PPIL3	1
NM_130906	PPIL3	1
NM_032472	PPIL3	1
NM_138723	BCL2L14	1
NM_030766	BCL2L14	1
NM_138722	BCL2L14	1
XM_096733	C14orf72	1
XM_944937	C14orf72	1
NM_006955	ZNF33B	1
NM_005030	PLK1	1
NM_013392	NRBP1	1
NM_007078	LDB3	1
NM_001080114	LDB3	1
NM_020792	AADACL1	1
NM_024854	FLJ22028	1
NM_006624	ZMYND11	1
XM_001132119	LOC257407	1
XM_001129456	LOC257407	1
NM_005370	RAB8A	1
NM_032373	PCGF5	1
NM_033069	C6orf114	1
NM_001031739	ASB9	1
NM_019616	F7	1
NM_000131	F7	1
NM_018943	TUBA8	1
NM_000875	IGF1R	1
NM_001427	EN2	1
NM_000722	CACNA2D1	1
NM_005870	SAP18	1
NM_024770	METTL8	1
NM_001100398		1
NM_015085	GARNL4	1
NM_021057	IFNA7	1
NM_020709		1
NM_198057	TSC22D3	1
NM_001015881	TSC22D3	1
NM_004089	TSC22D3	1
NM_182903	KIF9	1
NM_006037	HDAC4	1
NM_000761	CYP1A2	1
NM_004979	KCND1	1
NM_000457	HNF4A	1
NM_178849	HNF4A	1
NM_005400	PRKCE	1
NM_001295	CCR1	1
NM_016536	ZNF571	1
NM_153051	MTMR3	1
NM_021090	MTMR3	1
NM_153050	MTMR3	1
NM_153244	C10orf111	1
XM_944416	C17orf51	1
XM_378661	C17orf51	1
NM_033036	GAL3ST3	1
NM_014711	CP110	1
XM_001132013	ANKH	1
NM_054027	ANKH	1
NM_005631	SMO	1
NM_017888	FLJ20581	1
NM_005921		1
NM_006065	SIRPB1	1
NM_001083910	SIRPB1	1
NM_004779	CNOT8	1
XM_001125845	LOC730391	1
XM_001127758	LOC728555	1
NM_134470	IL1RAP	1
NM_183238	ZNF605	1
XM_001127308	FLJ37638	1
NM_014405	CACNG4	1
NM_016315	GULP1	1
NM_024090	ELOVL6	1
NM_018252	C1orf75	1
NM_145733	SEPT3	1
NM_019106	SEPT3	1
NM_001009993	LOC130074	1
NM_018403	DCP1A	1
NM_031366	COL4A3	1
NM_000091	COL4A3	1
NM_031365	COL4A3	1
NM_031362	COL4A3	1
NM_001077263	TMPRSS13	1
NM_152418	WDR21C	1
NM_002228	JUN	1
NM_001003652	SMAD2	1
NM_005901	SMAD2	1
NM_015101	GLT25D2	1
NM_020996	FGF6	1
NM_015983	UBE2D4	1
XM_001131309	LOC731099	1
XM_001127462	LOC728089	1
NM_080685	PTPN13	1
NM_080683	PTPN13	1
NM_006264	PTPN13	1
NM_080684	PTPN13	1
NM_001099334		1
NM_005324	H3F3B	1
NM_173065	IL28RA	1
NM_173064	IL28RA	1
NM_170743	IL28RA	1
NM_012288	TRAM2	1
NM_003590	CUL3	1
NM_015076	CDC2L6	1
NM_014723	SNPH	1
NM_003162	STRN	1
NM_020429	SMURF1	1
NM_181349	SMURF1	1
NM_001707	BCL7B	1
NM_003137	SRPK1	1
NM_001099777		1
NM_207102	FBXW12	1
NM_000634	IL8RA	1
NM_016083	CNR1	1
NM_033181	CNR1	1
NM_001008390	CGGBP1	1
NM_003663	CGGBP1	1
NM_002657	PLAGL2	1
NM_024969	FAM130A2	1
NM_015655	ZNF337	1
NM_006043	HS3ST2	1
NM_018339	RFK	1
NM_006064	RRAGB	1
NM_016656	RRAGB	1
NM_033389	SSH2	1
NM_006785	MALT1	1
NM_173844	MALT1	1
NM_001040152	PEG10	1
NM_015068	PEG10	1
NM_014553	TFCP2L1	1
NM_018361	AGPAT5	1
NM_015038		1
NM_024627	C22orf29	1
XM_932949	RGNEF	1
NM_022845	CBFB	1
NM_001755	CBFB	1
NM_020927	KIAA1576	1
NM_020909	EPB41L5	1
NM_001969	EIF5	1
NM_183004	EIF5	1
NM_005297	MCHR1	1
NM_003203	C2orf3	1
NM_032408	BAZ1B	1
NM_012409	PRND	1
NM_173829	P18SRP	1
NM_003603	SORBS2	1
NM_021069	SORBS2	1
NM_001004342	TRIM67	1
NM_005692	ABCF2	1
NM_005607	PTK2	1
NM_153831	PTK2	1
XM_001132771	FAM116A	1
NM_152678	FAM116A	1
NM_148170	CTSC	1
NM_174896	C1orf162	1
NM_052907	TMEM132B	1
NM_001104544		1
NM_001104545		1
NM_017938	FAM70A	1
NM_014243	ADAMTS3	1
XM_938433	C20orf123	1
XM_496476	C20orf123	1
NM_000237	LPL	1
NM_015455	CNOT6	1
XM_942964	LOC286411	1
XM_932619	LOC286411	1
NM_001031684	SFRS7	1
NM_018921	PCDHGA9	1
NM_018923	PCDHGB2	1
NM_018929	PCDHGC5	1
NM_002588	PCDHGC3	1
NM_018917	PCDHGA4	1
NM_018918	PCDHGA5	1
NM_032088	PCDHGA8	1
NM_018915	PCDHGA2	1
NM_018922	PCDHGB1	1
NM_003736	PCDHGB4	1
NM_018927	PCDHGB7	1
NM_018924	PCDHGB3	1
NM_018914	PCDHGA11	1
NM_018920	PCDHGA7	1
NM_018913	PCDHGA10	1
NM_018916	PCDHGA3	1
NM_018926	PCDHGB6	1
NM_003735	PCDHGA12	1
NM_032403	PCDHGC3	1
NM_032092	PCDHGA11	1
NM_018912	PCDHGA1	1
NM_018919	PCDHGA6	1
NM_018925	PCDHGB5	1
NM_018928	PCDHGC4	1
NM_016129	COPS4	1
NM_175039	ST6GALNAC4	1
NM_175040	ST6GALNAC4	1
XM_933796	SLC45A4	1
NM_153825	SLA/LP	1
NM_004984	KIF5A	1
NM_033331	CDC14B	1
NM_003671	CDC14B	1
NM_001077181	CDC14B	1
NM_012399	PITPNB	1
NM_003458	BSN	1
NM_023947	CHID1	1
NM_001003683	PDE1A	1
NM_003079	SMARCE1	1
NM_001040153	SLAIN1	1
NM_144595	SLAIN1	1
XM_001126392	LOC727909	1
XM_001126407	LOC727909	1
XM_001126378	LOC727909	1
XM_001126877	LOC728047	1
XM_001126928	LOC728047	1
XM_001126912	LOC728047	1
XM_926998	LOC643699	1
XM_001126904	LOC728047	1
XM_001127034	LOC728080	1
XM_001127051	LOC728080	1
XM_001127002	LOC728080	1
XM_001127022	LOC728080	1
XM_930496	LOC645752	1
XM_370876	LOC653643	1
NM_018652	GOLGA	1
XM_496076	LOC653641	1
NM_001038640	GOLGA6	1
XM_928167	LOC645137	1
NM_001012423	GOLGA8E	1
NM_001012452	FLJ32679	1
NM_001012420	GOLGA8G	1
NM_170665	ATP2A2	1
NM_025196	GRPEL1	1
NM_170723	CDY1	1
NM_001003894	CDY1B	1
NM_005530	IDH3A	1
NM_194298	SLC16A9	1
NM_144571	CNOT6L	1
NM_001100164		1
NM_001100166		1
NM_014721	PHACTR2	1
NM_001100165		1
NM_207325	DPY19L3	1
NM_030790	ITFG1	1
NM_019117	KLHL4	1
NM_012072	CD93	1
NM_018184	ARL8B	1
NM_002223	ITPR2	1
NM_013372	GREM1	1
NM_002163	IRF8	1
NM_147175	HS6ST2	1
NM_001077188	HS6ST2	1
NM_004488	GP5	1
NM_024570	RNASEH2B	1
NM_012420	IFIT5	1
NM_001008539	SLC7A2	1
NM_003046	SLC7A2	1
NM_178585	WDFY3	1
NM_014991	WDFY3	1
NM_018983	NOLA1	1
NM_032993	NOLA1	1
NM_001099221		1
NM_018404	CENTA2	1
NM_033428	C9orf123	1
NM_002737	PRKCA	1
NM_080821	C20orf108	1
NM_031890	CECR6	1
NM_022173	TIA1	1
NM_022037	TIA1	1
NM_024928	OBFC1	1
NM_024541	C10orf76	1
NM_001105193		1
NM_001105195		1
NM_001105194		1
NM_152698	FLJ38377	1
NM_052897	MBD6	1
NM_022843	PCDH20	1
NM_007315	STAT1	1
NM_000621	HTR2A	1
XM_001127447	LOC728431	1
XM_001132105	LOC732178	1
NM_017617	NOTCH1	1
NM_003104	SORD	1
NM_182492	LRP5L	1
NM_014584	ERO1L	1
NM_033132	ZIC5	1
NM_001110514		1
NM_000545	TCF1	1
NM_003620	PPM1D	1
NM_175913	JPH2	1
NM_001042432	CLN3	1
NM_000086	CLN3	1
XM_932285	LOC644652	1
XM_930805	LOC642426	1
NM_207316	UNQ846	1
NM_005669	REEP5	1
NM_006250	PRH1	1
NM_003417	ZNF264	1
NM_006569	CGREF1	1
NM_139283	PPTC7	1
NM_003074	SMARCC1	1
NM_032557	USP38	1
NM_001018058	TFEC	1
NM_012252	TFEC	1
NM_005417	SRC	1
NM_198291	SRC	1
NM_025125	C10orf57	1
NM_032268	ZNRF1	1
NM_130459	TOR2A	1
NM_013374	PDCD6IP	1
NM_001033113	ENTPD8	1
NM_198585	ENTPD8	1
NM_030877	CTNNBL1	1
NM_006923	SDF2	1
NM_080546	SLC44A1	1
NM_001012427	FOXP4	1
NM_138457	FOXP4	1
NM_001012426	FOXP4	1
NM_024699	ZFAND1	1
NM_018509	LRRC59	1
NM_004048	B2M	1
NM_001042590	C9orf127	1
NM_001042589	C9orf127	1
NM_175768	GRIK2	1
NM_021956	GRIK2	1
NM_152515	CKAP2L	1
NM_014747	RIMS3	1
NM_145039	MGC16385	1
NM_001011708	GTPBP9	1
NM_013341	GTPBP9	1
NM_032174	TOMM40L	1
NM_020526	EPHA8	1
NM_003051	SLC16A1	1
XM_940318	FLJ40411	1
NM_001080504	FLJ40411	1
NM_198562	C3orf62	1
NM_198256	E2F6	1
NM_001010971	SAMD13	1
NM_002664	PLEK	1
NM_139008	HFE	1
NM_139003	HFE	1
NM_139010	HFE	1
NM_139011	HFE	1
NM_139009	HFE	1
NM_000410	HFE	1
NM_139004	HFE	1
NM_139007	HFE	1
NM_139006	HFE	1
NM_001012446	C9orf128	1
NM_030581	WDR59	1
NM_024037	C1orf135	1
NM_002451	MTAP	1
NM_207380	FLJ43339	1
NM_001040613	TMEM70	1
XM_943975	FLJ39080	1
XM_499117	FLJ39080	1
NM_004382	CRHR1	1
NM_002225	IVD	1
XM_928464	LOC146517	1
NM_006052	DSCR3	1
NM_000382	ALDH3A2	1
NM_001031806	ALDH3A2	1
NM_006203	PDE4D	1
NM_001104631		1
NM_002446	MAP3K10	1
NM_020702	KIAA1161	1
NM_203327	SLC23A2	1
NM_005116	SLC23A2	1
NM_001039127	ZNF718	1
NM_014012	REM1	1
NM_023076	C16orf28	1
NM_173214	NFAT5	1
NM_006599	NFAT5	1
NM_138714	NFAT5	1
NM_001113178		1
NM_138713	NFAT5	1
NM_152511	DUSP18	1
NM_001025356	TMEM16F	1
NM_182947	GEFT	1
NM_001111270		1
NM_003184	TAF2	1
NM_032569	N-PAC	1
NM_002198	IRF1	1
NM_004827	ABCG2	1
NM_152388	ALS2CR4	1
NM_001044385	ALS2CR4	1
NM_001099666		1
NM_006096	NDRG1	1
NM_207366	FLJ44060	1
NM_001109689		1
NM_021061	ZNF250	1
NM_001809	CENPA	1
NM_001042426	CENPA	1
NM_016929	CLIC5	1
NM_004087	DLG1	1
NM_001098424		1
NM_001105543		1
NM_006303	JTV1	1
NM_001001709	FLJ45537	1
NM_148903	GREB1	1
NM_023926	ZSCAN18	1
NM_014805	EPM2AIP1	1
NM_005670	EPM2A	1
NM_033427	CTTNBP2	1
NM_031886	KCNA7	1
NM_182762	7A5	1
NM_006912	RIT1	1
NM_001080494	C1orf34	1
XM_934658	C1orf34	1
XM_945965	C1orf34	1
XM_942427	C1orf34	1
XM_930328	C1orf34	1
XM_945959	C1orf34	1
NM_001083112	GPD2	1
NM_000408	GPD2	1
NM_001082480	ZNF623	1
NM_014789	ZNF623	1
NM_001962	EFNA5	1
NM_005918	MDH2	1
NM_018319	TDP1	1
NM_001008744	TDP1	1
NM_014868	RNF10	1
NM_001043318	C14orf43	1
NM_194278	C14orf43	1
NM_002820	PTHLH	1
NM_198964	PTHLH	1
NM_130809	PRRC1	1
NM_003706	PLA2G4C	1
NM_176786	IL9R	1
NM_002186	IL9R	1
NM_004985	KRAS	1
NM_033360	KRAS	1
NM_007030	TPPP	1
NM_207585	IFNAR2	1
NM_020919	ALS2	1
XM_939663	KIAA1553	1
NM_001080450	KIAA1553	1
NM_016520	C9orf78	1
NM_207497	FLJ43752	1
NM_020911		1
NM_207333	ZNF320	1
NM_015984	UCHL5	1
NM_006287	TFPI	1
NM_003890	FCGBP	1
XM_001131379	FCGBP	1
NM_007086	WDHD1	1
NM_001008396	WDHD1	1
NM_173084	TRIM59	1
NM_005895	GOLGA3	1
NM_001034838	KCNIP1	1
NM_001034837	KCNIP1	1
NM_014592	KCNIP1	1
NM_017563	IL17RD	1
NM_001080973	IL17RD	1
NM_001040875	GDAP1	1
NM_018972	GDAP1	1
NM_007022	CYB561D2	1
NM_014957	DENND3	1
NM_015351		1
NM_138769	RHOT2	1
NM_032953	MLXIPL	1
NM_032954	MLXIPL	1
NM_032951	MLXIPL	1
NM_032952	MLXIPL	1
NM_001109754		1
NM_002837	PTPRB	1
NM_001013663	LOC391356	1
NM_024776		1
NM_133337	FER1L3	1
NM_013451	FER1L3	1
XM_944080	LOC650193	1
XM_932038	LOC644192	1
NM_015329	KIAA0892	1
NM_144770	RBM11	1
NM_007331	WHSC1	1
NM_020207	C9orf102	1
NM_022733	SMAP1L	1
NM_001010887	ASAH3L	1
NM_175861	TMTC1	1
NM_016308	CMPK	1
NM_004495	NRG1	1
XM_001128484	LOC441259	1
XM_001128555	LOC730323	1
XM_936833	LOC644196	1
XM_927389	LOC644196	1
NM_002971	SATB1	1
NM_030660	ATXN3	1
NM_004993	ATXN3	1
NM_000663	ABAT	1
NM_020686	ABAT	1
NM_181523	PIK3R1	1
NM_181504	PIK3R1	1
NM_181524	PIK3R1	1
NM_000053	ATP7B	1
NM_001005918	ATP7B	1
NM_016025	METTL9	1
NM_001077180	METTL9	1
XM_942952	FLJ46284	1
XM_499123	FLJ46284	1
NM_207395	ZNF324B	1
NM_001035511	SDHC	1
NM_002677	PMP2	1
NM_177551	GPR109A	1
XM_001134375	GPR109B	1
NM_006018	GPR109B	1
NM_001006657	WDR35	1
NM_020779	WDR35	1
NM_003379	VIL2	1
NM_001111077		1
NM_002494	NDUFC1	1
NM_013412	RABL2A	1
NM_007081	RABL2B	1
NM_001003789	RABL2B	1
NM_138738	FCRL2	1
NM_030764	FCRL2	1
NM_133265	AMOT	1
NM_006537	USP3	1
XM_944271	USP45	1
XM_939661	USP45	1
XM_944273	USP45	1
XM_944255	USP45	1
XM_931094	USP45	1
XM_931124	USP45	1
XM_931115	USP45	1
NM_001080481	USP45	1
NM_015090	NFASC	1
NM_001881	CREM	1
NM_017634	KCTD9	1
NM_005842	SPRY2	1
NM_017778	WHSC1L1	1
NM_001109878		1
NM_016954	TBX22	1
NM_001109879		1
NM_001083591	CUGBP2	1
NM_001025077	CUGBP2	1
NM_006561	CUGBP2	1
NM_001025076	CUGBP2	1
NM_004109	FDX1	1
NM_018325	C9orf72	1
NM_018225	SMU1	1
NM_032866	CGNL1	1
NM_000623	BDKRB2	1
NM_006252	PRKAA2	1
NM_001042517	DIAPH3	1
NM_002666	PLIN	1
NM_020386	HRASLS	1
XM_001129672	LOC728556	1
XM_001133737	LOC731745	1
NM_053064	GNG2	1
XM_936868	C10orf136	1
XM_926383	C10orf136	1
NM_014157	CCDC113	1
NM_023073	FLJ13231	1
NM_001104546		1
NM_004962	GDF10	1
NM_006063	KBTBD10	1
NM_203329	CD59	1
NM_203331	CD59	1
NM_203330	CD59	1
NM_000611	CD59	1
NM_007212	RNF2	1
NM_015879	ST8SIA3	1
NM_014692		1
NM_017637	BNC2	1
NM_000358	TGFBI	1
NM_006085	BPNT1	1
NM_152332	MTAC2D1	1
NM_006654	FRS2	1
NM_001042555	FRS2	1
NM_020954	KIAA1618	1
NM_152605	ZNF781	1
NM_203463	LASS6	1
NM_014613	UBXD8	1
NM_177422	EIF2C3	1
NM_024852	EIF2C3	1
NM_016142	HSD17B12	1
NM_145698	ACBD5	1
NM_001042473	ACBD5	1
NM_003112	SP4	1
NM_182757	IBRDC2	1
NM_018373	SYNJ2BP	1
NM_178313	SPTBN1	1
NM_005904	SMAD7	1
NM_001093755		1
NM_001093756		1
NM_024941	FLJ13611	1
NM_002188	IL13	1
NM_012338	TSPAN12	1
NM_178571	MGC51025	1
NM_001099642		1
NM_018348	FLJ11171	1
XM_001134277	LOC221362	1
NM_006257	PRKCQ	1
NM_016410	CHMP5	1
NM_001037533	GON4L	1
NM_015514	NGDN	1
NM_001025266	LOC285382	1
NM_000212	ITGB3	1
NM_001031804	MAF	1
NM_014965	TRAK1	1
NM_002063	GLRA2	1
NM_015107	PHF8	1
XM_001128504	LOC731069	1
NM_178582	HM13	1
NM_001232	CASQ2	1
NM_001037165	FOXK1	1
NM_052847	GNG7	1
NM_018211	RAVER2	1
XM_931676	LOC643599	1
XM_943286	LOC648354	1
NM_001037325	CCDC46	1
NM_145036	CCDC46	1
NM_052818	CG018	1
NM_001079691	CG018	1
NM_001101387		1
NM_015385	SORBS1	1
NM_001034954	SORBS1	1
NM_001034957	SORBS1	1
NM_001034955	SORBS1	1
NM_001034956	SORBS1	1
NM_006434	SORBS1	1
NM_024991	SORBS1	1
XM_942240	LOC650557	1
NM_138328	RHBDL3	1
NM_133460	ZNF418	1
NM_133264	WIPF2	1
NM_001102658		1
NM_033133	CNP	1
NM_173576	MKX	1
NM_001029874	REP15	1
NM_004992	MECP2	1
NM_053055	THEM4	1
NM_001026213	CYP11B1	1
NM_000497	CYP11B1	1
NM_203305	FAM102A	1
NM_001035254	FAM102A	1
NM_176877	INADL	1
NM_000702	ATP1A2	1
NM_153764	KCNJ1	1
NM_153766	KCNJ1	1
NM_000220	KCNJ1	1
NM_153765	KCNJ1	1
NM_153767	KCNJ1	1
NM_001101372		1
NM_001103147		1
NM_001103148		1
NM_001103146		1
NM_015575	TNRC15	1
NM_004594	SLC9A5	1
NM_001033047	NPNT	1
NM_016531	KLF3	1
NM_015621	CCDC69	1
NM_025107	MYCT1	1
NM_001037954	DIXDC1	1
NM_033425	DIXDC1	1
NM_002628	PFN2	1
NM_053024	PFN2	1
NM_005160	ADRBK2	1
NM_207115	ZNF580	1
NM_016202	ZNF580	1
NM_001080398	KIAA0368	1
XM_001131778	KIAA0368	1
NM_016099	GOLGA7	1
NM_001002296	GOLGA7	1
NM_017752	TBC1D8B	1
NM_001852	COL9A2	1
NM_003359	UGDH	1
NM_001001938	C9orf47	1
NM_015485	RWDD3	1
NM_144684	ZNF480	1
NM_014937	INPP5F	1
NM_005020	PDE1C	1
NM_014341	MTCH1	1
NM_001942	DSG1	1
NM_000266	NDP	1
NM_015289	VPS39	1
NM_004091	E2F2	1
NM_006726	LRBA	1
NM_006814	PSMF1	1
NM_178578	PSMF1	1
NM_015517	MIZF	1
NM_198971	MIZF	1
NM_032389	ZNF289	1
NM_002252	KCNS3	1
NM_000133	F9	1
NM_002214	ITGB8	1
NM_001098199		1
NM_005279	GPR1	1
NM_153184	CADM2	1
NM_013236	ATXN10	1
NM_001042697	ZSWIM7	1
NM_006272	S100B	1
NM_207467	FLJ35530	1
NM_004294	MTRF1	1
NM_015192	PLCB1	1
NM_182734	PLCB1	1
NM_002959	SORT1	1
XM_001129778	LOC730785	1
XM_001134206	LOC729987	1
NM_021255	PELI2	1
NM_015215	CAMTA1	1
NM_004930	CAPZB	1
NM_012278	ITGB1BP2	1
NM_145010	C10orf63	1
NM_006435	IFITM2	1
NM_016481	C9orf156	1
NM_001329	CTBP2	1
NM_001083914		1
NM_022802	CTBP2	1
NM_017892		1
NM_022844	MYH11	1
NM_002474	MYH11	1
NM_001040114	MYH11	1
NM_001040113	MYH11	1
NM_006931	SLC2A3	1
NM_020935	USP37	1
NM_001905	CTPS	1
NM_130440	PTPRF	1
NM_002840	PTPRF	1
NM_015338	ASXL1	1
NM_005906	MAK	1
NM_004818	DDX23	1
NM_003822	NR5A2	1
NM_205860	NR5A2	1
NM_014862	ARNT2	1
NM_153226	TMEM20	1
NM_003211	TDG	1
NM_002119	HLA-DOA	1
NM_014220	TM4SF1	1
NM_001033551	TOM1L2	1
NM_001082968	TOM1L2	1
NM_018243	SEPT11	1
NM_020424	LYRM1	1
NM_003747	TNKS	1
NM_001025079	CD47	1
NM_001777	CD47	1
NM_198793	CD47	1
NM_020845	PITPNM2	1
NM_003789	TRADD	1
NM_153210	USP43	1
NM_015554	GLCE	1
NM_001030272	ARNTL	1
NM_001178	ARNTL	1
NM_001030273	ARNTL	1
NM_025194	ITPKC	1
NM_005544	IRS1	1
NM_015336	ZDHHC17	1
NM_003426	ZNF74	1
NM_006330	LYPLA1	1
NM_173601		1
NM_001099650		1
NM_002398	MEIS1	1
NM_001003656	PPP2R2D	1
NM_018461	PPP2R2D	1
NM_015397	WDR40A	1
NM_000337	SGCD	1
NM_004067	CHN2	1
NM_001039936	CHN2	1
NM_001732	BTN1A1	1
NM_032440	LCOR	1
NM_006055	LANCL1	1
NM_006165	NFRKB	1
NM_006393	NEBL	1
NM_145251	STYX	1
XM_001125680	LOC730432	1
XM_001125705	LOC730432	1
NM_015534	ZZZ3	1
NM_001039697	SNAPC3	1
NM_012413	QPCT	1
NM_182898	CREB5	1
NM_004904	CREB5	1
NM_001011666	CREB5	1
NM_182899	CREB5	1
NM_002844	PTPRK	1
NM_032193	RNASEH2C	1
NM_003135	SRP19	1
NM_018202	TMEM57	1
NM_030899	ZNF323	1
NM_145909	ZNF323	1
NM_003296	CRISP2	1
NM_000686	AGTR2	1
NM_153035	C1orf83	1
NM_018434	RNF130	1
NM_000185	SERPIND1	1
NM_015030	FRYL	1
NM_018367	PHCA	1
NM_002829	PTPN3	1
NM_015282	CLASP1	1
NM_022087	GALNT11	1
NM_007006	NUDT21	1
NM_133468	BMPER	1
NM_144978	FLJ32745	1
NM_001098672		1
NM_007144	PCGF2	1
XM_001125875	LOC727818	1
NM_033224	PURB	1
NM_173573	C11orf35	1
NM_176823	S100A7A	1
NM_001111283		1
NM_000618	IGF1	1
NM_001111284		1
NM_006915	RP2	1
NM_000351	STS	1
XM_926521	LOC653137	1
XM_928267	LOC653270	1
NM_078483	SLC36A1	1
NM_207168	ENSA	1
NM_001166	BIRC2	1
NM_005014	OMD	1
NM_000721	CACNA1E	1
NM_001015508	PURG	1
NM_022787	NMNAT1	1
NM_033437	PDE5A	1
NM_001083	PDE5A	1
NM_033430	PDE5A	1
NM_024817	THSD4	1
NM_001037	SCN1B	1
NM_021245	MYOZ1	1
NM_002607	PDGFA	1
NM_033023	PDGFA	1
NM_020859	SHROOM3	1
NM_153832	GPR161	1
NM_012214	MGAT4A	1
NM_000235	LIPA	1
NM_033220	TRIM14	1
NM_181354	OXR1	1
NM_001077511	TCF19	1
NM_007109	TCF19	1
NM_017825	ADPRHL2	1
XM_942780	SYNPO2	1
NM_000310	PPT1	1
XM_001127763	LOC730820	1
XM_001127798	LOC728381	1
NM_030759	NRBF2	1
NM_006040	HS3ST4	1
XM_001132212	HS3ST4	1
NM_014588	VSX1	1
NM_001032280	TFAP2A	1
NM_003220	TFAP2A	1
NM_001042425	TFAP2A	1
NM_001112663		1
NM_006629	ZNF271	1
NM_019098	CNGB3	1
NM_018263	ASXL2	1
NM_024742	ARMC5	1
NM_173591	C12orf64	1
NM_004573	PLCB2	1
NM_018122	DARS2	1
NM_145321	OSBPL3	1
NM_145320	OSBPL3	1
NM_145322	OSBPL3	1
NM_015550	OSBPL3	1
NM_023110	FGFR1	1
NM_023106	FGFR1	1
NM_015850	FGFR1	1
NM_023111	FGFR1	1
NM_023105	FGFR1	1
NM_015651	PHF19	1
XM_941807	NHSL1	1
XM_496826	NHSL1	1
NM_005409	CXCL11	1
NM_001293	CLNS1A	1
NM_000428	LTBP2	1
NM_152495	CNIH3	1
NM_014315	KLHDC2	1
NM_080820	DTD1	1
NM_175569	XG	1
NM_000838	GRM1	1
NM_032457	PCDH7	1
NM_001530	HIF1A	1
NM_181054	HIF1A	1
NM_017664	ANKRD10	1
NM_012465	TLL2	1
NM_014646	LPIN2	1
NM_004402	DFFB	1
NM_033034	TRIM5	1
NM_003468	FZD5	1
NM_030637	DDHD1	1
NM_133493	CD109	1
NM_006565	CTCF	1
NM_013256	ZNF180	1
NM_020772	NUFIP2	1
NM_000909	NPY1R	1
NM_032147	USP44	1
NM_001042403	USP44	1
NM_198461	LONRF2	1
NM_019012	PLEKHA5	1
NM_000926	PGR	1
NM_021813	BACH2	1
NM_152772	TCP11L2	1
NM_017882	CLN6	1
NM_014899	RHOBTB3	1
NM_017848	FAM120C	1
NM_206909	PSD3	1
NM_015310	PSD3	1
NM_014388	C1orf107	1
NM_001106	ACVR2B	1
NM_032780	TMEM25	1
NM_016436	PHF20	1
NM_006656	NEU3	1
NM_174924	PDILT	1
NM_024408	NOTCH2	1
XM_001133349	NOTCH2	1
NM_003966	SEMA5A	1
NM_001798	CDK2	1
NM_052827	CDK2	1
NM_006807	CBX1	1
NM_007039	PTPN21	1
NM_003998	NFKB1	1
NM_006773	DDX18	1
NM_032521	PARD6B	1
NM_032503	MCHR2	1
NM_001040179	MCHR2	1
NM_002745	MAPK1	1
NM_014145	C20orf30	1
NM_001009923	C20orf30	1
NM_001009924	C20orf30	1
NM_001009925	C20orf30	1
NM_018312	SAPS3	1
NM_080387	CLEC4D	1
NM_005789	PSME3	1
NM_176863	PSME3	1
NM_152695	ZNF449	1
NM_001010853	ACY1L2	1
NM_148571	MRPL27	1
NM_000728	CALCB	1
NM_057178	RFFL	1
NM_001017368	RFFL	1
NM_138292	ATM	1
NM_000051	ATM	1
NM_005749	TOB1	1
XM_943661	LRRC38	1
XM_059074	LRRC38	1
NM_001039840	CHIC1	1
NM_032859	ABHD13	1
NM_014687		1
NM_020198	CCDC47	1
NM_002356	MARCKS	1
NM_022557	GH2	1
NM_001924	GADD45A	1
NM_022558	GH2	1

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Immunostimulatory motif search results

UGUGU - Judge et al. Sequence-dependent stimulation of the mammalian innate immune response by synthetic siRNA. Nat Biotechnol. 2005 Apr;23(4):457-62. (PMID: 15778705)
No Immunostimulatory motif found (UGUGU).

GUCCUUCAA - Hornung et al. Sequence-specific potent induction of IFN-alpha by short interfering RNA in plasmacytoid dendritic cells through TLR7. Nat Med. 2005 Mar;11(3):263-70. Epub 2005 Feb 20. (PMID: 15723075)
No Immunostimulatory motif found (GUCCUUCAA).

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Settings used for search

Scores were calculated using scoring scheme SS1
Using AVG scoring mode.

Hit scores

Parameter	Spec. Score cut-off	Colour	Comment
Hit to same gene		Colour	Hits to the same accession or genes with 100 percent identity (i.e. likely transcript variants). It is advisable to always check the genes hit.
High scoring hit	≥80	Colour	Hits are very likely to cause an off-target effect
Medium scoring hit	<80¸≥40	Colour	Hits with a small chance of causing an off target effect.
Low scoring hit		Colour	Hits very unlikely to cause an off-target effect

The mismatches are colour coded based on the weighting of that position.

Cut-off	Colour
Match	Colour
Wobble base pairs (G-U)	Colour
Critical bases (none)	Colour
0.6 bits	Colour
0.4 bits	Colour
0.2 bits	Colour

About SpecificityServer

SpecificityServer is designed to help you identify potential non-specific matches to your siRNA. It incorporates the latest information about non-specific matches (sequence-specific only).

Designed by: Alistair Chalk, Quan Du, Zicai Liang and Erik L.L. Sonnhammer

For more details about the algorithm "siRNA specificity searching incorporating mismatch tolerance data" Bioinformatics (2008) 24 (10): 1316-1317