Domain-domain interaction prediction server
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  • Submit single protein sequence

    This module will first compute the domain organisation of the protein, and predicts the interacting partners of those domain(s).

    Paste Protein Sequence (fasta format)
    Example sequence
    >M. tuberculosis H37Rv|Rv2855|Mtr: 459 aa
    METYDIAIIGTGSGNSILDERYASKRAAICEQGTFGGTCLNVGCIPTKMFVYAAEVAKTI
    RGASRYGIDAHIDRVRWDDVVSRVFGRIDPIALSGEDYRRCAPNIDVYRTHTRFGPVQAD
    GRYLLRTDAGEEFTAEQVVIAAGSRPVIPPAILASGVDYHTSDTVMRIAELPEHIVIVGS
    GFIAAEFAHVFSALGVRVTLVIRGSCLLRHCDDTICERFTRIASTKWELRTHRNVVDGQQ
    RGSGVALRLDDGCTINADLLLVATGRVSNADLLDAEQAGVDVEDGRVIVDEYQRTSARGV
    FALGDVSSPYLLKHVANHEARVVQHNLLCDWEDTQSMIVTDHRYVPAAVFTDPQIAAVGL
    TENQAVAKGLDISVKIQDYGDVAYGWAMEDTSGIVKLITERGSGRLLGAHIMGYQASSLI
    QPLIQAMSFGLTAAEMARGQYWIHPALPEVVENALLGLR
    Select E-value cut-off for Pfam domain mapping