AVP-PEpred:
Antiviral Peptide-Percent Efficacy Predictor
Home
Predict
Algorithm
Tools
Mutation modules
Peptide tinker
Custom mutations
Motif finder
Property calculator
BLAST
AVPdb BLAST
HIPdb BLAST
MAP
AVPdb MAP
HIPdb MAP
Fragmenter
Datasets
How to use
FAQs
Useful links
Team
Contact
BLAST Search
AVPdb BLAST
BLAST your peptide sequence against AVPdb.
Enter your peptide sequence below in
FASTA
format
Example
>XYZ
KVLTTGLPALISWIKRKRQQ
Or load it from disk
Expect
0.0001
0.01
1
10
100
1000
Matrix
PAM30
PAM70
BLOSUM80
BLOSUM62
BLOSUM45
Perform ungapped alignment
Other advanced options:
Graphical Overview
Alignment view
Pairwise
master-slave with identities
master-slave without identities
flat master-slave with identities
flat master-slave without identities
BLAST XML
Hit Table
Descriptions
0
10
50
100
250
500
Alignments
0
10
50
100
250
500
Color schema
Color schema 1
Color schema 2
Color schema 3
Color schema 4
Color schema 5
Color schema 6
No color schema
Copyright © 2014
CSIR-Institute of Microbial Technology, Chandigarh 160036, India
|