VIRmiRNA -A database of viral miRNA
VMR_0040 details

miRNA Id:VMR_0040
Virus:Bovine leukemia virus (BLV)
Taxonomy:View
Nomenclature:blv-miR-b1-3p
miRNA Sequence: ucaguguaccaucacaagccucu
Length: 23
Predicted secondary structure (UNAfold):
GC Content (%):47.83
pre-miRNA:blv-miR-b1
pre-miRNA Sequence:aggcugugguggugcacuggcuuaguggaguagucaguguaccaucacaagccucu
Arm: 3p
Cell line: BL3.1, HEK293T cells
Method:Northern blot analysis, Solexa(NGS)
Reference: 22308400, 23345446
BLAST (miRBase): 8mer seed | 7mer seed
BLAST (VIRmiRNA): 8mer seed | 7mer seed
Align (miRBase): 8mer seed | 7mer seed
Align (VIRmiRNA): 8mer seed | 7mer seed
Align (Human genes): 8mer seed | 7mer seed