VIRmiRNA -A database of viral miRNA
VMR_0044 details

miRNA Id:VMR_0044
Virus:Bovine leukemia virus (BLV)
Taxonomy:View
Nomenclature:blv-miR-b2-5p
miRNA Sequence: augacugaguguagcgcagaga
Length: 22
Predicted secondary structure (UNAfold):
GC Content (%):50
pre-miRNA:blv-miR-b2
pre-miRNA Sequence:augacugaguguagcgcagagagauugucgcuucugcgugucgcucagucauuuu
Arm: 5p
Cell line: BL3.1, HEK293T cells
Method:Northern blot analysis, Solexa(NGS)
Reference: 22308400, 23345446
BLAST (miRBase): 8mer seed | 7mer seed
BLAST (VIRmiRNA): 8mer seed | 7mer seed
Align (miRBase): 8mer seed | 7mer seed
Align (VIRmiRNA): 8mer seed | 7mer seed
Align (Human genes): 8mer seed | 7mer seed