VIRmiRNA -A database of viral miRNA
VMR_0101 details

miRNA Id:VMR_0101
Virus:Epstein Barr virus (EBV)
Taxonomy:View
Nomenclature:ebv-miR-bart12
miRNA Sequence: uccugugguguuuggugugguu
Length: 22
Predicted secondary structure (UNAfold):
GC Content (%):50
pre-miRNA:ebv-mir-bart12
pre-miRNA Sequence:cuggugaccuaacacccgcccaucaccaccggacagauucugaacuuguccugugguguuuggugugguuuugggguacgcag
Arm: 3p
Cell line: Jijoye, BC-1 cells
Method:Cloned, Northern blot analysis
Reference: 16557291, 17604727, 16540699
BLAST (miRBase): 8mer seed | 7mer seed
BLAST (VIRmiRNA): 8mer seed | 7mer seed
Align (miRBase): 8mer seed | 7mer seed
Align (VIRmiRNA): 8mer seed | 7mer seed
Align (Human genes): 8mer seed | 7mer seed