VIRmiRNA -A database of viral miRNA
VMR_0139 details

miRNA Id:VMR_0139
Virus:Epstein Barr virus (EBV)
Taxonomy:View
Nomenclature:ebv-miR-bart9
miRNA Sequence: uaacacuucaugggucccguagu
Length: 23
Predicted secondary structure (UNAfold):
GC Content (%):47.83
pre-miRNA:ebv-mir-bart9
pre-miRNA Sequence:cagcuguuguuuguacuggacccugaauuggaaacaguaacuuggauucuguaacacuucaugggucccguagugacaacuaugcug
Arm: 3p
Cell line: Jijoye, BC-1 cells
Method:Cloned, Northern blot analysis
Reference: 16557291, 17604727, 16540699
BLAST (miRBase): 8mer seed | 7mer seed
BLAST (VIRmiRNA): 8mer seed | 7mer seed
Align (miRBase): 8mer seed | 7mer seed
Align (VIRmiRNA): 8mer seed | 7mer seed
Align (Human genes): 8mer seed | 7mer seed