miRNA Id: | VMR_0165 |
Virus: | Herpes B virus (HBV) |
Taxonomy: | View |
Nomenclature: | hbv-miR-b20-5p |
miRNA Sequence: | agugaggguggcgagcgcgugga |
Length: | 23 |
Predicted secondary structure (UNAfold): | |
GC Content (%): | 69.57 |
pre-miRNA: | hbv-mir-b20 |
pre-miRNA Sequence: | cgccggcggcggccgagagugaggguggcgagcgcguggacgcaccucccgacgugcugguugcccgcgcucucgggcgcggccggacg |
Arm: | 5p |
Cell line: | Vero cells, HeLa cells |
Method: | Deep sequencing |
Reference: | 21543500 |
BLAST (miRBase): | 8mer seed | 7mer seed |
BLAST (VIRmiRNA): | 8mer seed | 7mer seed |
Align (miRBase): | 8mer seed | 7mer seed |
Align (VIRmiRNA): | 8mer seed | 7mer seed |
Align (Human genes): | 8mer seed | 7mer seed |