VIRmiRNA -A database of viral miRNA
VMR_0170 details

miRNA Id:VMR_0170
Virus:Herpes B virus (HBV)
Taxonomy:View
Nomenclature:hbv-miR-b20-5p
miRNA Sequence: agagugaggguggcgagcg
Length: 19
Predicted secondary structure (UNAfold):
GC Content (%):68.42
pre-miRNA:hbv-mir-b20
pre-miRNA Sequence:cgccggcggcggccgagagugaggguggcgagcgcguggacgcaccucccgacgugcugguugcccgcgcucucgggcgcggccggacg
Arm: 5p
Cell line: Vero cells, HeLa cells
Method:Deep sequencing
Reference: 21543500
BLAST (miRBase): 8mer seed | 7mer seed
BLAST (VIRmiRNA): 8mer seed | 7mer seed
Align (miRBase): 8mer seed | 7mer seed
Align (VIRmiRNA): 8mer seed | 7mer seed
Align (Human genes): 8mer seed | 7mer seed