miRNA Id: | VMR_0246 |
Virus: | Human cytomegalovirus (HCMV) |
Taxonomy: | View |
Nomenclature: | hcmv-miR-us5-1-5p |
miRNA Sequence: | cgcuuucgucguguuuuucaug |
Length: | 22 |
Predicted secondary structure (UNAfold): | |
GC Content (%): | 45.45 |
pre-miRNA: | hcmv-miR-us5 |
pre-miRNA Sequence: | aagucugauccaacacugaacgcuuucgucguguuuuucaugcagcuuuuacagac |
Arm: | 5p |
Cell line: | HFF cells |
Method: | Deep sequencing |
Reference: | 22715351 |
BLAST (miRBase): | 8mer seed | 7mer seed |
BLAST (VIRmiRNA): | 8mer seed | 7mer seed |
Align (miRBase): | 8mer seed | 7mer seed |
Align (VIRmiRNA): | 8mer seed | 7mer seed |
Align (Human genes): | 8mer seed | 7mer seed |