VIRmiRNA -A database of viral miRNA
VMR_0246 details

miRNA Id:VMR_0246
Virus:Human cytomegalovirus (HCMV)
Taxonomy:View
Nomenclature:hcmv-miR-us5-1-5p
miRNA Sequence: cgcuuucgucguguuuuucaug
Length: 22
Predicted secondary structure (UNAfold):
GC Content (%):45.45
pre-miRNA:hcmv-miR-us5
pre-miRNA Sequence:aagucugauccaacacugaacgcuuucgucguguuuuucaugcagcuuuuacagac
Arm: 5p
Cell line: HFF cells
Method:Deep sequencing
Reference: 22715351
BLAST (miRBase): 8mer seed | 7mer seed
BLAST (VIRmiRNA): 8mer seed | 7mer seed
Align (miRBase): 8mer seed | 7mer seed
Align (VIRmiRNA): 8mer seed | 7mer seed
Align (Human genes): 8mer seed | 7mer seed