miRNA Id: | VMR_0247 |
Virus: | Human cytomegalovirus (HCMV) |
Taxonomy: | View |
Nomenclature: | hcmv-miR-us5-2 |
miRNA Sequence: | uuaugauaggugugacgauguc |
Length: | 22 |
Predicted secondary structure (UNAfold): | |
GC Content (%): | 40.91 |
pre-miRNA: | hcmv-mir-us5-2 |
pre-miRNA Sequence: | ggaggcuuucgccacaccuauccugaaagcguugcauucuuuaugauaggugugacgaugucuuu |
Arm: | 3p |
Cell line: | BCBL-1, BJAB cells |
Method: | Cloned, Solexa(NGS) |
Reference: | 15782219, 22013051 |
BLAST (miRBase): | 8mer seed | 7mer seed |
BLAST (VIRmiRNA): | 8mer seed | 7mer seed |
Align (miRBase): | 8mer seed | 7mer seed |
Align (VIRmiRNA): | 8mer seed | 7mer seed |
Align (Human genes): | 8mer seed | 7mer seed |