miRNA Id: | VMR_0254 |
Virus: | Human herpesvirus 6B (HHV-6) |
Taxonomy: | View |
Nomenclature: | hhv6b-miR-ro6-3-3p |
miRNA Sequence: | agaccgagcgggcuccauccg |
Length: | 21 |
Predicted secondary structure (UNAfold): | |
GC Content (%): | 71.43 |
pre-miRNA: | pre-hhv6b-miR-Ro6-3 |
pre-miRNA Sequence: | ccggagcggcgacggagcccgcucgguaucgcggacgugcgagaccgagcgggcuccauccgccgcucgguc |
Arm: | 3p |
Cell line: | Sup-T-1 cells |
Method: | Deep sequencing |
Reference: | 22114334 |
BLAST (miRBase): | 8mer seed | 7mer seed |
BLAST (VIRmiRNA): | 8mer seed | 7mer seed |
Align (miRBase): | 8mer seed | 7mer seed |
Align (VIRmiRNA): | 8mer seed | 7mer seed |
Align (Human genes): | 8mer seed | 7mer seed |