VIRmiRNA -A database of viral miRNA
VMR_0261 details

miRNA Id:VMR_0261
Virus:Human immunodeficiency virus 1 (HIV1)
Taxonomy:View
Nomenclature:hiv1-miR-tar-5p
miRNA Sequence: ucucucugguuagaccagaucuga
Length: 24
Predicted secondary structure (UNAfold):
GC Content (%):45.83
pre-miRNA:hiv1-mir-tar
pre-miRNA Sequence:gggucucucugguuagaccagaucugagccugggagcucucuggcuaacuagggaacccac
Arm: 5p
Cell line: HEK293 cells
Method:Northern blot analysis
Reference: 18299284
BLAST (miRBase): 8mer seed | 7mer seed
BLAST (VIRmiRNA): 8mer seed | 7mer seed
Align (miRBase): 8mer seed | 7mer seed
Align (VIRmiRNA): 8mer seed | 7mer seed
Align (Human genes): 8mer seed | 7mer seed