miRNA Id: | VMR_0304 |
Virus: | Herpes simplex virus 1 (HSV1) |
Taxonomy: | View |
Nomenclature: | hsv1-miR-h27 |
miRNA Sequence: | cagaccccuuucuccccccucuu |
Length: | 23 |
Predicted secondary structure (UNAfold): | |
GC Content (%): | 60.87 |
pre-miRNA: | hsv1-mir-H27 |
pre-miRNA Sequence: | agaagagggaagaagaggggucgggauccaaaggacggacccagaccaccuuugguugcagaccccuuucuccccccucuucc |
Arm: | 3p |
Cell line: | L-02, Vero cells |
Method: | Northern blot analysis, RT-PCR |
Reference: | 23512275 |
BLAST (miRBase): | 8mer seed | 7mer seed |
BLAST (VIRmiRNA): | 8mer seed | 7mer seed |
Align (miRBase): | 8mer seed | 7mer seed |
Align (VIRmiRNA): | 8mer seed | 7mer seed |
Align (Human genes): | 8mer seed | 7mer seed |