VIRmiRNA -A database of viral miRNA
VMR_0304 details

miRNA Id:VMR_0304
Virus:Herpes simplex virus 1 (HSV1)
Taxonomy:View
Nomenclature:hsv1-miR-h27
miRNA Sequence: cagaccccuuucuccccccucuu
Length: 23
Predicted secondary structure (UNAfold):
GC Content (%):60.87
pre-miRNA:hsv1-mir-H27
pre-miRNA Sequence:agaagagggaagaagaggggucgggauccaaaggacggacccagaccaccuuugguugcagaccccuuucuccccccucuucc
Arm: 3p
Cell line: L-02, Vero cells
Method:Northern blot analysis, RT-PCR
Reference: 23512275
BLAST (miRBase): 8mer seed | 7mer seed
BLAST (VIRmiRNA): 8mer seed | 7mer seed
Align (miRBase): 8mer seed | 7mer seed
Align (VIRmiRNA): 8mer seed | 7mer seed
Align (Human genes): 8mer seed | 7mer seed