miRNA Id: | VMR_0312 |
Virus: | Herpes Simplex Virus 1 (HSV1) |
Taxonomy: | View |
Nomenclature: | hsv1-miR-h6 |
miRNA Sequence: | cacuucccguccuuccauccc |
Length: | 21 |
Predicted secondary structure (UNAfold): | |
GC Content (%): | 61.9 |
pre-miRNA: | hsv1-mir-h6 |
pre-miRNA Sequence: | cggggggccggaggguggaaggcagggggguguaggauggguaucaggacuuccacuucccguccuuccaucccccguuccccucg |
Arm: | 3p |
Cell line: | HEK293T, Vero cells |
Method: | Northern blot analysis,RT-PCR |
Reference: | 18596690 |
BLAST (miRBase): | 8mer seed | 7mer seed |
BLAST (VIRmiRNA): | 8mer seed | 7mer seed |
Align (miRBase): | 8mer seed | 7mer seed |
Align (VIRmiRNA): | 8mer seed | 7mer seed |
Align (Human genes): | 8mer seed | 7mer seed |