VIRmiRNA -A database of viral miRNA
VMR_0345 details

miRNA Id:VMR_0345
Virus:Herpesvirus saimiri strain A11 (HVSA)
Taxonomy:View
Nomenclature:hvsa-miR-hsur2-5p
miRNA Sequence: ucugugcucucaaggcuuuaaa
Length: 22
Predicted secondary structure (UNAfold):
GC Content (%):40.91
pre-miRNA:hvsa-mir-hsur2
pre-miRNA Sequence:ucugugcucucaaggcuuuaaacuuuguguuuaaaaguuuuagagccuugagagcacu
Arm: 5p
Cell line: HEK293T cells
Method:Solexa(NGS)
Reference: 21925386
BLAST (miRBase): 8mer seed | 7mer seed
BLAST (VIRmiRNA): 8mer seed | 7mer seed
Align (miRBase): 8mer seed | 7mer seed
Align (VIRmiRNA): 8mer seed | 7mer seed
Align (Human genes): 8mer seed | 7mer seed