miRNA Id: | VMR_0378 |
Virus: | Infectious laryngotracheitis virus (ILTV) |
Taxonomy: | View |
Nomenclature: | iltv-miR-i1 |
miRNA Sequence: | agacugauuggggaaugauugg |
Length: | 22 |
Predicted secondary structure (UNAfold): | |
GC Content (%): | 45.45 |
pre-miRNA: | iltv-mir-i1 |
pre-miRNA Sequence: | cgcagaggagacugauuggggaaugauugggaagcuugugccaauuccauuccucuuucugucuccaccg |
Arm: | 5p |
Cell line: | CEF, CK, CEK cells |
Method: | Solexa(NGS) |
Reference: | 19328516 |
BLAST (miRBase): | 8mer seed | 7mer seed |
BLAST (VIRmiRNA): | 8mer seed | 7mer seed |
Align (miRBase): | 8mer seed | 7mer seed |
Align (VIRmiRNA): | 8mer seed | 7mer seed |
Align (Human genes): | 8mer seed | 7mer seed |