VIRmiRNA -A database of viral miRNA
VMR_0378 details

miRNA Id:VMR_0378
Virus:Infectious laryngotracheitis virus (ILTV)
Taxonomy:View
Nomenclature:iltv-miR-i1
miRNA Sequence: agacugauuggggaaugauugg
Length: 22
Predicted secondary structure (UNAfold):
GC Content (%):45.45
pre-miRNA:iltv-mir-i1
pre-miRNA Sequence:cgcagaggagacugauuggggaaugauugggaagcuugugccaauuccauuccucuuucugucuccaccg
Arm: 5p
Cell line: CEF, CK, CEK cells
Method:Solexa(NGS)
Reference: 19328516
BLAST (miRBase): 8mer seed | 7mer seed
BLAST (VIRmiRNA): 8mer seed | 7mer seed
Align (miRBase): 8mer seed | 7mer seed
Align (VIRmiRNA): 8mer seed | 7mer seed
Align (Human genes): 8mer seed | 7mer seed