VIRmiRNA -A database of viral miRNA
VMR_0383 details

miRNA Id:VMR_0383
Virus:Infectious laryngotracheitis virus (ILTV)
Taxonomy:View
Nomenclature:iltv-miR-i5
miRNA Sequence: ugaagaagacgacgacgaggagcau
Length: 25
Predicted secondary structure (UNAfold):
GC Content (%):52
pre-miRNA:iltv-mir-i5
pre-miRNA Sequence:ucguucuucucguccccgucuucuucagaugagcuggagucugaagaagacgacgacgaggagcaugagg
Arm: 3p
Cell line: CEF, CK, CEK cells
Method:Solexa(NGS), 454
Reference: 19328516, 19728068
BLAST (miRBase): 8mer seed | 7mer seed
BLAST (VIRmiRNA): 8mer seed | 7mer seed
Align (miRBase): 8mer seed | 7mer seed
Align (VIRmiRNA): 8mer seed | 7mer seed
Align (Human genes): 8mer seed | 7mer seed