VIRmiRNA -A database of viral miRNA
VMR_0414 details

miRNA Id:VMR_0414
Virus:Kaposi sarcoma-associated herpesvirus (KSHV)
Taxonomy:View
Nomenclature:kshv-miR-k12-7-5p
miRNA Sequence: agcgccaccggacggggauuuaug
Length: 24
Predicted secondary structure (UNAfold):
GC Content (%):62.5
pre-miRNA:kshv-mir-k12-7
pre-miRNA Sequence:gcguugagcgccaccggacggggauuuaugcuguaucuuacuaccaugaucccauguugcuggcgcucacgg
Arm: 5p
Cell line: HEK293, DG75 cells
Method:RT-PCR
Reference: 21283761
BLAST (miRBase): 8mer seed | 7mer seed
BLAST (VIRmiRNA): 8mer seed | 7mer seed
Align (miRBase): 8mer seed | 7mer seed
Align (VIRmiRNA): 8mer seed | 7mer seed
Align (Human genes): 8mer seed | 7mer seed