miRNA Id: | VMR_0414 |
Virus: | Kaposi sarcoma-associated herpesvirus (KSHV) |
Taxonomy: | View |
Nomenclature: | kshv-miR-k12-7-5p |
miRNA Sequence: | agcgccaccggacggggauuuaug |
Length: | 24 |
Predicted secondary structure (UNAfold): | ![]() |
GC Content (%): | 62.5 |
pre-miRNA: | kshv-mir-k12-7 |
pre-miRNA Sequence: | gcguugagcgccaccggacggggauuuaugcuguaucuuacuaccaugaucccauguugcuggcgcucacgg |
Arm: | 5p |
Cell line: | HEK293, DG75 cells |
Method: | RT-PCR |
Reference: | 21283761 |
BLAST (miRBase): | 8mer seed | 7mer seed |
BLAST (VIRmiRNA): | 8mer seed | 7mer seed |
Align (miRBase): | 8mer seed | 7mer seed |
Align (VIRmiRNA): | 8mer seed | 7mer seed |
Align (Human genes): | 8mer seed | 7mer seed |