VIRmiRNA -A database of viral miRNA
VMR_0418 details

miRNA Id:VMR_0418
Virus:Kaposi sarcoma-associated herpesvirus (KSHV)
Taxonomy:View
Nomenclature:kshv-miR-k12-9*
miRNA Sequence: acccagcugcguaaaccccgcu
Length: 22
Predicted secondary structure (UNAfold):
GC Content (%):63.64
pre-miRNA:kshv-mir-k12-9
pre-miRNA Sequence:gggucuacccagcugcguaaaccccgcugcguaaacacagcuggguauacgcagcugcguaaaccc
Arm: 5p
Cell line: BC-1, BCBL-1, BJAB cells
Method:Cloned
Reference: 15800047, 20566670
BLAST (miRBase): 8mer seed | 7mer seed
BLAST (VIRmiRNA): 8mer seed | 7mer seed
Align (miRBase): 8mer seed | 7mer seed
Align (VIRmiRNA): 8mer seed | 7mer seed
Align (Human genes): 8mer seed | 7mer seed