VIRmiRNA -A database of viral miRNA
VMR_0480 details

miRNA Id:VMR_0480
Virus:Mareks disease virus type 1 (MDV1)
Taxonomy:View
Nomenclature:mdv1-miR-m7-5p
miRNA Sequence: uguuaucucggggagaucccgau
Length: 23
Predicted secondary structure (UNAfold):
GC Content (%):52.17
pre-miRNA:na
pre-miRNA Sequence:-
Arm: 5p
Cell line: Chicken kidney (CK), Chicken embryo kidney (CEK) cells
Method:Next Generation Sequencing
Reference: 21645299, 24449754
BLAST (miRBase): 8mer seed | 7mer seed
BLAST (VIRmiRNA): 8mer seed | 7mer seed
Align (miRBase): 8mer seed | 7mer seed
Align (VIRmiRNA): 8mer seed | 7mer seed
Align (Human genes): 8mer seed | 7mer seed