VIRmiRNA -A database of viral miRNA
VMR_0522 details

miRNA Id:VMR_0522
Virus:Mareks disease virus type 2 (MDV2)
Taxonomy:View
Nomenclature:mdv2-miR-m30
miRNA Sequence: caacacucccucggacgcagca
Length: 22
Predicted secondary structure (UNAfold):
GC Content (%):63.64
pre-miRNA:mdv2-mir-m30
pre-miRNA Sequence:cacaacacucccucggacgcagcagugucugggcuucugcugacgugcgagggagugcucgccacgcgag
Arm: 5p
Cell line: MSB-1, CEF cells
Method:Cloned, Solexa(NGS)
Reference: 17459919, 19328516, 24449754
BLAST (miRBase): 8mer seed | 7mer seed
BLAST (VIRmiRNA): 8mer seed | 7mer seed
Align (miRBase): 8mer seed | 7mer seed
Align (VIRmiRNA): 8mer seed | 7mer seed
Align (Human genes): 8mer seed | 7mer seed