VIRmiRNA -A database of viral miRNA
VMR_0531 details

miRNA Id:VMR_0531
Virus:Mouse gammaherpesvirus 68 (MGHV)
Taxonomy:View
Nomenclature:mghv-miR-m1-11-5p
miRNA Sequence: agcugucagggguuacaug
Length: 19
Predicted secondary structure (UNAfold):
GC Content (%):52.63
pre-miRNA:mghv-mir-m1-11
pre-miRNA Sequence:gacagcugucagggguuacaugagagaacuucauguaaccccugacagcuguc
Arm: 5p
Cell line: S11, Ag8 cells
Method:454
Reference: 20668074
BLAST (miRBase): 8mer seed | 7mer seed
BLAST (VIRmiRNA): 8mer seed | 7mer seed
Align (miRBase): 8mer seed | 7mer seed
Align (VIRmiRNA): 8mer seed | 7mer seed
Align (Human genes): 8mer seed | 7mer seed