miRNA Id: | VMR_0539 |
Virus: | Mouse gammaherpesvirus 68 (MGHV) |
Taxonomy: | View |
Nomenclature: | mghv-miR-m1-2-3p |
miRNA Sequence: | cagacccccucucccccucuuu |
Length: | 22 |
Predicted secondary structure (UNAfold): | |
GC Content (%): | 63.64 |
pre-miRNA: | mghv-mir-m1-2 |
pre-miRNA Sequence: | gagagggggaguguguggucuguagagagacaugaguugaucggcagacccccucucccccucuuu |
Arm: | 3p |
Cell line: | MHV68, NIH3T3, S11 cell line |
Method: | Cloned, 454 |
Reference: | 15782219, 20668074, 23110115 |
BLAST (miRBase): | 8mer seed | 7mer seed |
BLAST (VIRmiRNA): | 8mer seed | 7mer seed |
Align (miRBase): | 8mer seed | 7mer seed |
Align (VIRmiRNA): | 8mer seed | 7mer seed |
Align (Human genes): | 8mer seed | 7mer seed |