miRNA Id: | VMR_1015 |
Virus: | Rhesus lymphocryptovirus (RLCV) |
Taxonomy: | View |
Nomenclature: | rlcv-miR-rl1-27-5p |
miRNA Sequence: | gccgccuccuugguucugucca |
Length: | 22 |
Predicted secondary structure (UNAfold): | |
GC Content (%): | 63.64 |
pre-miRNA: | rlcv-mir-rl1-27 |
pre-miRNA Sequence: | ggagugacccggagccgccuccuugguucuguccacauuuuguugcugcacauaaccauggaggugguugcggugcagcc |
Arm: | 5p |
Cell line: | Jijoye cells |
Method: | Northern blot analysis, Solexa(NGS) |
Reference: | 19889779, 20219930 |
BLAST (miRBase): | 8mer seed | 7mer seed |
BLAST (VIRmiRNA): | 8mer seed | 7mer seed |
Align (miRBase): | 8mer seed | 7mer seed |
Align (VIRmiRNA): | 8mer seed | 7mer seed |
Align (Human genes): | 8mer seed | 7mer seed |