VIRmiRNA -A database of viral miRNA
VMR_1040 details

miRNA Id:VMR_1040
Virus:Rhesus lymphocryptovirus (RLCV)
Taxonomy:View
Nomenclature:rlcv-miR-rl1-34-5p
miRNA Sequence: uagauggcguaacaggcaacuu
Length: 22
Predicted secondary structure (UNAfold):
GC Content (%):45.45
pre-miRNA:rlcv-mir-rl1-34
pre-miRNA Sequence:caaacaaggcuguagccuuuagauggcguaacaggcaacuuguguaugaggccaaguuagcccgaaccgcuauccauaugcugcugcuccaucuc
Arm: 5p
Cell line: BJAB cells
Method:Northern blot analysis
Reference: 20219930
BLAST (miRBase): 8mer seed | 7mer seed
BLAST (VIRmiRNA): 8mer seed | 7mer seed
Align (miRBase): 8mer seed | 7mer seed
Align (VIRmiRNA): 8mer seed | 7mer seed
Align (Human genes): 8mer seed | 7mer seed