miRNA Id: | VMR_1055 |
Virus: | Rhesus lymphocryptovirus (RLCV) |
Taxonomy: | View |
Nomenclature: | rlcv-miR-rl1-5-3p |
miRNA Sequence: | cgcaccacuuuucacuaggugu |
Length: | 22 |
Predicted secondary structure (UNAfold): | |
GC Content (%): | 50 |
pre-miRNA: | rlcv-mir-rl1-5 |
pre-miRNA Sequence: | cuucgguggaaccuagugccggugaugugcuguggauaggcagcuagcgcaccacuuuucacuaggugucaccgggg |
Arm: | 3p |
Cell line: | PEL, BL, LCL cells |
Method: | Cloned, Solexa(NGS) |
Reference: | 16557291, 20219930 |
BLAST (miRBase): | 8mer seed | 7mer seed |
BLAST (VIRmiRNA): | 8mer seed | 7mer seed |
Align (miRBase): | 8mer seed | 7mer seed |
Align (VIRmiRNA): | 8mer seed | 7mer seed |
Align (Human genes): | 8mer seed | 7mer seed |