VIRmiRNA -A database of viral miRNA
VMR_1143 details

miRNA Id:VMR_1143
Virus:Rhesus rhadinovirus (RRV)
Taxonomy:View
Nomenclature:rrv-miR-rr1-7-5p
miRNA Sequence: gagagcaguuaacgugcguu
Length: 20
Predicted secondary structure (UNAfold):
GC Content (%):50
pre-miRNA:rrv-mir-rr1-7
pre-miRNA Sequence:ugcgauucguggagagcaguuaacgugcguucccgucaauuaauaccggcgcacgucgauugcucucuagggauccca
Arm: 5p
Cell line: HEK293T cells
Method:Deep sequencing
Reference: 20655562
BLAST (miRBase): 8mer seed | 7mer seed
BLAST (VIRmiRNA): 8mer seed | 7mer seed
Align (miRBase): 8mer seed | 7mer seed
Align (VIRmiRNA): 8mer seed | 7mer seed
Align (Human genes): 8mer seed | 7mer seed