miRNA Id: | VMR_1184 |
Virus: | Torque teno virus (TTV) |
Taxonomy: | View |
Nomenclature: | ttv-twh-t1 |
miRNA Sequence: | aguagcugacgucaaggauugac |
Length: | 23 |
Predicted secondary structure (UNAfold): | |
GC Content (%): | 47.83 |
pre-miRNA: | ttv-twh-t1 |
pre-miRNA Sequence: | ccgcauuuuaaguagcugacgucaaggauugacguagagguuaaaggucauccucggcggaagcuacacaaaauggugg |
Arm: | 5p |
Cell line: | HEK293T cells |
Method: | Northern blot analysis, Next generation sequencing |
Reference: | 24367263 |
BLAST (miRBase): | 8mer seed | 7mer seed |
BLAST (VIRmiRNA): | 8mer seed | 7mer seed |
Align (miRBase): | 8mer seed | 7mer seed |
Align (VIRmiRNA): | 8mer seed | 7mer seed |
Align (Human genes): | 8mer seed | 7mer seed |