VIRmiRNA -A database of viral miRNA
VMR_1185 details

miRNA Id:VMR_1185
Virus:Torque teno virus (TTV)
Taxonomy:View
Nomenclature:ttv-twh-t2
miRNA Sequence: caagucacgugggggggacc
Length: 20
Predicted secondary structure (UNAfold):
GC Content (%):70
pre-miRNA:ttv-twh-t2
pre-miRNA Sequence:gugcauacgucacaagucacgugggggggacccgcuguaaccccgguaggccccgucacgugacuuaccacguguguac
Arm: 5p
Cell line: HEK293T cells
Method:Northern blot analysis, Next generation sequencing
Reference: 24367263
BLAST (miRBase): 8mer seed | 7mer seed
BLAST (VIRmiRNA): 8mer seed | 7mer seed
Align (miRBase): 8mer seed | 7mer seed
Align (VIRmiRNA): 8mer seed | 7mer seed
Align (Human genes): 8mer seed | 7mer seed