VIRmiRNA -A database of viral miRNA
VMR_1221 details

miRNA Id:VMR_1221
Virus:Turnip mosaic virus (TuMV)
Taxonomy:View
Nomenclature:tumv-miR-s40
miRNA Sequence: ccaugaauucuaaucggauguug
Length: 23
Predicted secondary structure (UNAfold):
GC Content (%):39.13
pre-miRNA:na
pre-miRNA Sequence:-
Arm: na
Cell line: A.thaliana virus-infected cells
Method:Microarray
Reference: WO 2012/048385 A1
BLAST (miRBase): 8mer seed | 7mer seed
BLAST (VIRmiRNA): 8mer seed | 7mer seed
Align (miRBase): 8mer seed | 7mer seed
Align (VIRmiRNA): 8mer seed | 7mer seed
Align (Human genes): 8mer seed | 7mer seed