VIRsiRNAdb

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Total number of Results for ORF2 are 4
Results from 0 - 25

siRNA sequence "uugaguauccugcucgagc" alignment with "Hepatitis E Virus [HEV]" virus reference Genome sequences
siRNA sequence matching with "uugaguauccugcucgagc" Hepatitis E Virus [HEV]" Virus reference Genome sequences
Browse all the records for "Hepatitis E Virus [HEV]" virus
Browse "virsi2186 " record
Length: 19
GC Content:53 %
Strain of Virus: 4
GenBank Acc: EF570133
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "uugaguauccugcucgagc" siRNA in Human Genome sequences
See EF570133 at Genbank
Pubmed:19963327
Article:RNA interference inhibits hepatitis E virus mRNA accumulation and protein synthesis in vitro.
Authors:Huang F, Zhou J, Yang Z, Cui L, Zhang W, Yuan C, Yang S, Zhu J, Hua X.
Journal:Vet Microbiol. 2010 May 19;142(3-4):261-7. Epub 2009 Nov 6.
Entrez:19963327

siRNA sequence "uccagcaguauucuaagac" alignment with "Hepatitis E Virus [HEV]" virus reference Genome sequences
siRNA sequence matching with "uccagcaguauucuaagac" Hepatitis E Virus [HEV]" Virus reference Genome sequences
Browse all the records for "Hepatitis E Virus [HEV]" virus
Browse "virsi2183 " record
Length: 19
GC Content:42 %
Strain of Virus: 4
GenBank Acc: EF570133
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "uccagcaguauucuaagac" siRNA in Human Genome sequences
See EF570133 at Genbank
Pubmed:19963327
Article:RNA interference inhibits hepatitis E virus mRNA accumulation and protein synthesis in vitro.
Authors:Huang F, Zhou J, Yang Z, Cui L, Zhang W, Yuan C, Yang S, Zhu J, Hua X.
Journal:Vet Microbiol. 2010 May 19;142(3-4):261-7. Epub 2009 Nov 6.
Entrez:19963327

siRNA sequence "uuucccugacggcugccga" alignment with "Hepatitis E Virus [HEV]" virus reference Genome sequences
siRNA sequence matching with "uuucccugacggcugccga" Hepatitis E Virus [HEV]" Virus reference Genome sequences
Browse all the records for "Hepatitis E Virus [HEV]" virus
Browse "virsi2184 " record
Length: 19
GC Content:63 %
Strain of Virus: 4
GenBank Acc: EF570133
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "uuucccugacggcugccga" siRNA in Human Genome sequences
See EF570133 at Genbank
Pubmed:19963327
Article:RNA interference inhibits hepatitis E virus mRNA accumulation and protein synthesis in vitro.
Authors:Huang F, Zhou J, Yang Z, Cui L, Zhang W, Yuan C, Yang S, Zhu J, Hua X.
Journal:Vet Microbiol. 2010 May 19;142(3-4):261-7. Epub 2009 Nov 6.
Entrez:19963327

siRNA sequence "uaauuauaauacuaccgcc" alignment with "Hepatitis E Virus [HEV]" virus reference Genome sequences
siRNA sequence matching with "uaauuauaauacuaccgcc" Hepatitis E Virus [HEV]" Virus reference Genome sequences
Browse all the records for "Hepatitis E Virus [HEV]" virus
Browse "virsi2185 " record
Length: 19
GC Content:32 %
Strain of Virus: 4
GenBank Acc: EF570133
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "uaauuauaauacuaccgcc" siRNA in Human Genome sequences
See EF570133 at Genbank
Pubmed:19963327
Article:RNA interference inhibits hepatitis E virus mRNA accumulation and protein synthesis in vitro.
Authors:Huang F, Zhou J, Yang Z, Cui L, Zhang W, Yuan C, Yang S, Zhu J, Hua X.
Journal:Vet Microbiol. 2010 May 19;142(3-4):261-7. Epub 2009 Nov 6.
Entrez:19963327


VIRsiRNAid	siRNA Sequence	Virus_Name	Target Region	Cell Line	Test Object	Efficacy	PMID	Offtarget	Align With	ALIGN0 Result
virsi2186	uugaguauccugcucgagc	Hepatitis E Virus [HEV]	ORF2	A549	mRNA	Medium	19963327	Blast SL	refseqs
virsi2183	uccagcaguauucuaagac	Hepatitis E Virus [HEV]	ORF2	A549	mRNA	High	19963327	Blast SL	refseqs
virsi2184	uuucccugacggcugccga	Hepatitis E Virus [HEV]	ORF2	A549	mRNA	High	19963327	Blast SL	refseqs
virsi2185	uaauuauaauacuaccgcc	Hepatitis E Virus [HEV]	ORF2	A549	mRNA	High	19963327	Blast SL	refseqs



: siRNA specific for both strands
: siRNA specific for only one strands
: siRNA Not specific
SL: siRNA seedlocator algorithm