VIRsiRNAdb

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Total number of Results for 15041532 are 4
Results from 0 - 25

siRNA sequence "guggacagagaaggucucu" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "guggacagagaaggucucu" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1850 " record
Length: 19
GC Content:53 %
Starting position: 622
GenBank Acc: EU910136
Transfection Reagent: Oligofectamine
Incubation Time (Hours):36

Offtargets for "guggacagagaaggucucu" siRNA in Human Genome sequences
See EU910136 at Genbank
Pubmed:15041532
Article:Effect of inhibition of EBV-encoded latent membrane protein-1 by small interfering RNA on EBV-positive nasopharyngeal carcinoma cell growth.
Authors:Li G, Li XP, Peng Y, Liu X, Li XH.
Journal:Di Yi Jun Yi Da Xue Xue Bao. 2004 Mar;24(3):241-6.
Entrez:15041532

siRNA sequence "ccaauagaguccaccaguu" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "ccaauagaguccaccaguu" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1849 " record
Length: 19
GC Content:47 %
Starting position: 1044
GenBank Acc: EU910136
Transfection Reagent: Oligofectamine
Incubation Time (Hours):72

Offtargets for "ccaauagaguccaccaguu" siRNA in Human Genome sequences
See EU910136 at Genbank
Pubmed:15041532
Article:Effect of inhibition of EBV-encoded latent membrane protein-1 by small interfering RNA on EBV-positive nasopharyngeal carcinoma cell growth.
Authors:Li G, Li XP, Peng Y, Liu X, Li XH.
Journal:Di Yi Jun Yi Da Xue Xue Bao. 2004 Mar;24(3):241-6.
Entrez:15041532

siRNA sequence "aaugccuguccuugcaaau" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "aaugccuguccuugcaaau" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1851 " record
Length: 19
GC Content:42 %
Starting position: 776
GenBank Acc: EU910136
Transfection Reagent: Oligofectamine
Incubation Time (Hours):36

Offtargets for "aaugccuguccuugcaaau" siRNA in Human Genome sequences
See EU910136 at Genbank
Pubmed:15041532
Article:Effect of inhibition of EBV-encoded latent membrane protein-1 by small interfering RNA on EBV-positive nasopharyngeal carcinoma cell growth.
Authors:Li G, Li XP, Peng Y, Liu X, Li XH.
Journal:Di Yi Jun Yi Da Xue Xue Bao. 2004 Mar;24(3):241-6.
Entrez:15041532

siRNA sequence "agaaggagagcuaggccua" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "agaaggagagcuaggccua" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1852 " record
Length: 19
GC Content:53 %
Starting position: 476
GenBank Acc: EU910136
Transfection Reagent: Oligofectamine
Incubation Time (Hours):36

Offtargets for "agaaggagagcuaggccua" siRNA in Human Genome sequences
See EU910136 at Genbank
Pubmed:15041532
Article:Effect of inhibition of EBV-encoded latent membrane protein-1 by small interfering RNA on EBV-positive nasopharyngeal carcinoma cell growth.
Authors:Li G, Li XP, Peng Y, Liu X, Li XH.
Journal:Di Yi Jun Yi Da Xue Xue Bao. 2004 Mar;24(3):241-6.
Entrez:15041532


VIRsiRNAid	siRNA Sequence	Virus_Name	Target Region	Cell Line	Test Object	Efficacy	PMID	Offtarget	Align With	ALIGN0 Result
virsi1850	guggacagagaaggucucu	Epstein-Barr Virus [EBV]	LMP1	C666-1	mRNA	High	15041532	Blast SL	refseqs
virsi1849	ccaauagaguccaccaguu	Epstein-Barr Virus [EBV]	LMP1	C666-1	mRNA	76	15041532	Blast SL	refseqs
virsi1851	aaugccuguccuugcaaau	Epstein-Barr Virus [EBV]	LMP1	C666-1	mRNA	0	15041532	Blast SL	refseqs
virsi1852	agaaggagagcuaggccua	Epstein-Barr Virus [EBV]	LMP1	C666-1	mRNA	0	15041532	Blast SL	refseqs



: siRNA specific for both strands
: siRNA specific for only one strands
: siRNA Not specific
SL: siRNA seedlocator algorithm