VIRsiRNAdb

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Total number of Results for 16083932 are 4
Results from 0 - 25

siRNA sequence "gcuacuuugggaugca" alignment with "Enterovirus [EV]" virus reference Genome sequences
siRNA sequence matching with "gcuacuuugggaugca" Enterovirus [EV]" Virus reference Genome sequences
Browse all the records for "Enterovirus [EV]" virus
Browse "virsi1785 " record
Length: 16
GC Content:50 %
Starting position: 7304
Strain of Virus: EV71 (5865/Sin/000009)
GenBank Acc: AF316321
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "gcuacuuugggaugca" siRNA in Human Genome sequences
See AF316321 at Genbank
Pubmed:16083932
Article:RNA interference against enterovirus 71 infection.
Authors:Sim AC, Luhur A, Tan TM, Chow VT, Poh CL.
Journal:Virology. 2005 Oct 10;341(1):72-9.
Entrez:16083932

siRNA sequence "cuacuuugcgaguaugca" alignment with "Enterovirus [EV]" virus reference Genome sequences
siRNA sequence matching with "cuacuuugcgaguaugca" Enterovirus [EV]" Virus reference Genome sequences
Browse all the records for "Enterovirus [EV]" virus
Browse "virsi1784 " record
Length: 18
GC Content:44 %
Starting position: 5918
Strain of Virus: EV71 (5865/Sin/000009)
GenBank Acc: AF316321
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "cuacuuugcgaguaugca" siRNA in Human Genome sequences
See AF316321 at Genbank
Pubmed:16083932
Article:RNA interference against enterovirus 71 infection.
Authors:Sim AC, Luhur A, Tan TM, Chow VT, Poh CL.
Journal:Virology. 2005 Oct 10;341(1):72-9.
Entrez:16083932

siRNA sequence "aaccagaucacgaacuugg" alignment with "Enterovirus [EV]" virus reference Genome sequences
siRNA sequence matching with "aaccagaucacgaacuugg" Enterovirus [EV]" Virus reference Genome sequences
Browse all the records for "Enterovirus [EV]" virus
Browse "virsi1783 " record
Length: 19
GC Content:47 %
Starting position: 4251
Strain of Virus: EV71 (5865/Sin/000009)
GenBank Acc: AF316321
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "aaccagaucacgaacuugg" siRNA in Human Genome sequences
See AF316321 at Genbank
Pubmed:16083932
Article:RNA interference against enterovirus 71 infection.
Authors:Sim AC, Luhur A, Tan TM, Chow VT, Poh CL.
Journal:Virology. 2005 Oct 10;341(1):72-9.
Entrez:16083932

siRNA sequence "ucuggucguguuaaugacu" alignment with "Enterovirus [EV]" virus reference Genome sequences
siRNA sequence matching with "ucuggucguguuaaugacu" Enterovirus [EV]" Virus reference Genome sequences
Browse all the records for "Enterovirus [EV]" virus
Browse "virsi1782 " record
Length: 19
GC Content:42 %
Starting position: 7361
Strain of Virus: EV71 (5865/Sin/000009)
GenBank Acc: AF316321
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "ucuggucguguuaaugacu" siRNA in Human Genome sequences
See AF316321 at Genbank
Pubmed:16083932
Article:RNA interference against enterovirus 71 infection.
Authors:Sim AC, Luhur A, Tan TM, Chow VT, Poh CL.
Journal:Virology. 2005 Oct 10;341(1):72-9.
Entrez:16083932


VIRsiRNAid	siRNA Sequence	Virus_Name	Target Region	Cell Line	Test Object	Efficacy	PMID	Offtarget	Align With	ALIGN0 Result
virsi1785	gcuacuuugggaugca	Enterovirus [EV]	3D Pol	RD	RNA	78	16083932	Blast SL	refseqs
virsi1784	cuacuuugcgaguaugca	Enterovirus [EV]	3C Pro	RD	RNA	76	16083932	Blast SL	refseqs
virsi1783	aaccagaucacgaacuugg	Enterovirus [EV]	2C	RD	RNA	54	16083932	Blast SL	refseqs
virsi1782	ucuggucguguuaaugacu	Enterovirus [EV]	3'UTR	RD	RNA	44	16083932	Blast SL	refseqs



: siRNA specific for both strands
: siRNA specific for only one strands
: siRNA Not specific
SL: siRNA seedlocator algorithm