VIRsiRNAdb

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Total number of Results for 16343579 are 3
Results from 0 - 25

siRNA sequence "acguccaaguugcauuggc" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "acguccaaguugcauuggc" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1853 " record
Length: 19
GC Content:53 %
Starting position: 108174
Strain of Virus: B95-8
GenBank Acc: V01555
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "acguccaaguugcauuggc" siRNA in Human Genome sequences
See V01555 at Genbank
Pubmed:16343579
Article:siRNAs against the Epstein Barr virus latency replication factor, EBNA1, inhibit its function and growth of EBV-dependent tumor cells.
Authors:Yin Q, Flemington EK.
Journal:Virology. 2006 Mar 15;346(2):385-93. Epub 2005 Dec 15.
Entrez:16343579

siRNA sequence "ggagguuccaacccgaaau" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "ggagguuccaacccgaaau" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1854 " record
Length: 19
GC Content:53 %
Starting position: 109363
Strain of Virus: B95-8
GenBank Acc: V01555
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "ggagguuccaacccgaaau" siRNA in Human Genome sequences
See V01555 at Genbank
Pubmed:16343579
Article:siRNAs against the Epstein Barr virus latency replication factor, EBNA1, inhibit its function and growth of EBV-dependent tumor cells.
Authors:Yin Q, Flemington EK.
Journal:Virology. 2006 Mar 15;346(2):385-93. Epub 2005 Dec 15.
Entrez:16343579

siRNA sequence "ggacuaccgacgaaggaac" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "ggacuaccgacgaaggaac" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1855 " record
Length: 19
GC Content:58 %
Starting position: 109436
Strain of Virus: B95-8
GenBank Acc: V01555
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "ggacuaccgacgaaggaac" siRNA in Human Genome sequences
See V01555 at Genbank
Pubmed:16343579
Article:siRNAs against the Epstein Barr virus latency replication factor, EBNA1, inhibit its function and growth of EBV-dependent tumor cells.
Authors:Yin Q, Flemington EK.
Journal:Virology. 2006 Mar 15;346(2):385-93. Epub 2005 Dec 15.
Entrez:16343579


VIRsiRNAid	siRNA Sequence	Virus_Name	Target Region	Cell Line	Test Object	Efficacy	PMID	Offtarget	Align With	ALIGN0 Result
virsi1853	acguccaaguugcauuggc	Epstein-Barr Virus [EBV]	EBNA1	HeLa	Protein	High	16343579	Blast SL	refseqs
virsi1854	ggagguuccaacccgaaau	Epstein-Barr Virus [EBV]	EBNA1	HeLa	Protein	High	16343579	Blast SL	refseqs
virsi1855	ggacuaccgacgaaggaac	Epstein-Barr Virus [EBV]	EBNA1	HeLa	Protein	High	16343579	Blast SL	refseqs



: siRNA specific for both strands
: siRNA specific for only one strands
: siRNA Not specific
SL: siRNA seedlocator algorithm