VIRsiRNAdb

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Total number of Results for 16443303 are 5
Results from 0 - 25

siRNA sequence "gaggacucuuggacucuca" alignment with "Hepatitis B Virus [HBV]" virus reference Genome sequences
siRNA sequence matching with "gaggacucuuggacucuca" Hepatitis B Virus [HBV]" Virus reference Genome sequences
Browse all the records for "Hepatitis B Virus [HBV]" virus
Browse "virsi1437 " record
Length: 19
GC Content:53 %
Starting position: 1655
Incubation Time (Hours):72

Offtargets for "gaggacucuuggacucuca" siRNA in Human Genome sequences
See at Genbank
Pubmed:16443303
Article:Efficient inhibition of hepatitis B virus replication by small interfering RNAs targeted to the viral X gene in mice.
Authors:Shin D, Kim SI, Kim M, Park M.
Journal:Virus Res. 2006 Aug;119(2):146-53. Epub 2006 Jan 26.
Entrez:16443303

siRNA sequence "cguccgaccuugaggcaua" alignment with "Hepatitis B Virus [HBV]" virus reference Genome sequences
siRNA sequence matching with "cguccgaccuugaggcaua" Hepatitis B Virus [HBV]" Virus reference Genome sequences
Browse all the records for "Hepatitis B Virus [HBV]" virus
Browse "virsi1439 " record
Length: 19
GC Content:58 %
Starting position: 1684
Incubation Time (Hours):72

Offtargets for "cguccgaccuugaggcaua" siRNA in Human Genome sequences
See at Genbank
Pubmed:16443303
Article:Efficient inhibition of hepatitis B virus replication by small interfering RNAs targeted to the viral X gene in mice.
Authors:Shin D, Kim SI, Kim M, Park M.
Journal:Virus Res. 2006 Aug;119(2):146-53. Epub 2006 Jan 26.
Entrez:16443303

siRNA sequence "auuggucuguucaccagca" alignment with "Hepatitis B Virus [HBV]" virus reference Genome sequences
siRNA sequence matching with "auuggucuguucaccagca" Hepatitis B Virus [HBV]" Virus reference Genome sequences
Browse all the records for "Hepatitis B Virus [HBV]" virus
Browse "virsi1441 " record
Length: 19
GC Content:47 %
Starting position: 1790
Incubation Time (Hours):72

Offtargets for "auuggucuguucaccagca" siRNA in Human Genome sequences
See at Genbank
Pubmed:16443303
Article:Efficient inhibition of hepatitis B virus replication by small interfering RNAs targeted to the viral X gene in mice.
Authors:Shin D, Kim SI, Kim M, Park M.
Journal:Virus Res. 2006 Aug;119(2):146-53. Epub 2006 Jan 26.
Entrez:16443303

siRNA sequence "ugaucuuuguacuaggagg" alignment with "Hepatitis B Virus [HBV]" virus reference Genome sequences
siRNA sequence matching with "ugaucuuuguacuaggagg" Hepatitis B Virus [HBV]" Virus reference Genome sequences
Browse all the records for "Hepatitis B Virus [HBV]" virus
Browse "virsi1440 " record
Length: 19
GC Content:42 %
Starting position: 1759
Incubation Time (Hours):72

Offtargets for "ugaucuuuguacuaggagg" siRNA in Human Genome sequences
See at Genbank
Pubmed:16443303
Article:Efficient inhibition of hepatitis B virus replication by small interfering RNAs targeted to the viral X gene in mice.
Authors:Shin D, Kim SI, Kim M, Park M.
Journal:Virus Res. 2006 Aug;119(2):146-53. Epub 2006 Jan 26.
Entrez:16443303

siRNA sequence "ugucaacguccgaccuuga" alignment with "Hepatitis B Virus [HBV]" virus reference Genome sequences
siRNA sequence matching with "ugucaacguccgaccuuga" Hepatitis B Virus [HBV]" Virus reference Genome sequences
Browse all the records for "Hepatitis B Virus [HBV]" virus
Browse "virsi1438 " record
Length: 19
GC Content:53 %
Starting position: 1678
Incubation Time (Hours):72

Offtargets for "ugucaacguccgaccuuga" siRNA in Human Genome sequences
See at Genbank
Pubmed:16443303
Article:Efficient inhibition of hepatitis B virus replication by small interfering RNAs targeted to the viral X gene in mice.
Authors:Shin D, Kim SI, Kim M, Park M.
Journal:Virus Res. 2006 Aug;119(2):146-53. Epub 2006 Jan 26.
Entrez:16443303


VIRsiRNAid	siRNA Sequence	Virus_Name	Target Region	Cell Line	Test Object	Efficacy	PMID	Offtarget	Align With	ALIGN0 Result
virsi1437	gaggacucuuggacucuca	Hepatitis B Virus [HBV]	X	Huh-7	Protein	96	16443303	Blast SL	refseqs
virsi1439	cguccgaccuugaggcaua	Hepatitis B Virus [HBV]	X	Huh-7	Protein	94	16443303	Blast SL	refseqs
virsi1441	auuggucuguucaccagca	Hepatitis B Virus [HBV]	X	Huh-7	Protein	75	16443303	Blast SL	refseqs
virsi1440	ugaucuuuguacuaggagg	Hepatitis B Virus [HBV]	X	Huh-7	Protein	65	16443303	Blast SL	refseqs
virsi1438	ugucaacguccgaccuuga	Hepatitis B Virus [HBV]	X	Huh-7	Protein	40	16443303	Blast SL	refseqs



: siRNA specific for both strands
: siRNA specific for only one strands
: siRNA Not specific
SL: siRNA seedlocator algorithm