VIRsiRNAdb
Database of Viral siRNA / shRNA
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Family of Virus
Virus Name
Gene Name
Pubmed Id
VsiRNAid
Total number of Results for
16810314
are
2
Results from
0 - 25
VIRsiRNAid
siRNA Sequence
Virus_Name
Target Region
Cell Line
Test Object
Efficacy
PMID
Offtarget
Align With
ALIGN0 Result
virsi1733
agguauuugaauuugcauu
Human Papillomavirus [HPV]
E6
HeLa
Protein
Medium
16810314
Blast
SL
refseqs
     
siRNA sequence "
agguauuugaauuugcauu
" alignment with "
Human Papillomavirus [HPV]
" virus reference Genome sequences
siRNA sequence matching with "
agguauuugaauuugcauu
"
Human Papillomavirus [HPV]
" Virus reference Genome sequences
Browse all the records for "
Human Papillomavirus [HPV]
" virus
Browse "
virsi1733
" record
Length:
19
GC Content:
26 %
Starting position:
232
Strain of Virus:
HPV18
GenBank Acc:
NC_001357
Incubation Time (Hours):
48
Offtargets for "
agguauuugaauuugcauu
" siRNA in Human Genome sequences
See
NC_001357
at Genbank
Pubmed:
16810314
Article:
Inhibition of cervical cancer cell growth in vitro and in vivo with lentiviral-vector delivered short hairpin RNA targeting human papillomavirus E6 and E7 oncogenes.
Authors:
Gu W, Putral L, Hengst K, Minto K, Saunders NA, Leggatt G, McMillan NA.
Journal:
Cancer Gene Ther. 2006 Nov;13(11):1023-32. Epub 2006 Jun 30.
Entrez:
16810314
virsi1734
cagaaaaacuuagacaccu
Human Papillomavirus [HPV]
E6
HeLa
Protein
0
16810314
Blast
SL
refseqs
     
siRNA sequence "
cagaaaaacuuagacaccu
" alignment with "
Human Papillomavirus [HPV]
" virus reference Genome sequences
siRNA sequence matching with "
cagaaaaacuuagacaccu
"
Human Papillomavirus [HPV]
" Virus reference Genome sequences
Browse all the records for "
Human Papillomavirus [HPV]
" virus
Browse "
virsi1734
" record
Length:
19
GC Content:
37 %
Starting position:
448
Strain of Virus:
HPV18
GenBank Acc:
NC_001357
Incubation Time (Hours):
48
Offtargets for "
cagaaaaacuuagacaccu
" siRNA in Human Genome sequences
See
NC_001357
at Genbank
Pubmed:
16810314
Article:
Inhibition of cervical cancer cell growth in vitro and in vivo with lentiviral-vector delivered short hairpin RNA targeting human papillomavirus E6 and E7 oncogenes.
Authors:
Gu W, Putral L, Hengst K, Minto K, Saunders NA, Leggatt G, McMillan NA.
Journal:
Cancer Gene Ther. 2006 Nov;13(11):1023-32. Epub 2006 Jun 30.
Entrez:
16810314
: siRNA specific for both strands
: siRNA specific for only one strands
: siRNA Not specific
SL
: siRNA seedlocator algorithm